RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W OKP1P53298 406 aa2.43□□□□□ -2.02
SRP1YNL189W GCD2P12754 651 aaPredicted RBP2.42□□□□□ -2.02
SRP1YNL189W MSS116P15424 664 aaKnown RBP2.42□□□□□ -2.02
SRP1YNL189W RPB9P27999 122 aa2.42□□□□□ -2.02
SRP1YNL189W ZRT1P32804 376 aa2.42□□□□□ -2.02
SRP1YNL189W ZRT3P34240 503 aa2.42□□□□□ -2.02
SRP1YNL189W RRG9P40156 214 aa2.42□□□□□ -2.02
SRP1YNL189W SDS23P53172 527 aa2.42□□□□□ -2.02
SRP1YNL189W IRC4Q03036 179 aa2.42□□□□□ -2.02
SRP1YNL189W INP2Q03824 705 aa2.42□□□□□ -2.02
SRP1YNL189W UBX2Q04228 584 aa2.42□□□□□ -2.02
SRP1YNL189W VAC14Q06708 880 aa2.42□□□□□ -2.02
SRP1YNL189W YPR1Q12458 312 aa2.42□□□□□ -2.02
SRP1YNL189W ERD1P16151 362 aa2.42□□□□□ -2.02
SRP1YNL189W MRPL20P22354 195 aaPredicted RBP2.42□□□□□ -2.02
SRP1YNL189W YPC1P38298 316 aa2.42□□□□□ -2.02
SRP1YNL189W SLM1P40485 686 aa2.42□□□□□ -2.02
SRP1YNL189W HIT1P46973 164 aa2.42□□□□□ -2.02
SRP1YNL189W SNX41Q04053 625 aa2.42□□□□□ -2.02
SRP1YNL189W ECM18Q04623 453 aa2.42□□□□□ -2.02
SRP1YNL189W ECM19Q06011 112 aa2.42□□□□□ -2.02
SRP1YNL189W PRM4Q12498 284 aa2.42□□□□□ -2.02
SRP1YNL189W RFT1P38206 574 aaPredicted RBP2.41□□□□□ -2.02
SRP1YNL189W SOP4P39543 234 aaPredicted RBP2.41□□□□□ -2.02
SRP1YNL189W CDC40P40968 455 aaPredicted RBP2.41□□□□□ -2.02
SRP1YNL189W UTP15Q04305 513 aaKnown RBP2.41□□□□□ -2.02
SRP1YNL189W IES4Q08561 116 aa2.41□□□□□ -2.02
SRP1YNL189W SLF1Q12034 447 aaKnown RBP2.41□□□□□ -2.02
SRP1YNL189W YDL211CQ12121 372 aa2.41□□□□□ -2.02
SRP1YNL189W FUS3P16892 353 aaKnown RBP2.4□□□□□ -2.03
SRP1YNL189W PRY2P36110 329 aa2.4□□□□□ -2.03
SRP1YNL189W PNC1P53184 216 aaKnown RBP2.4□□□□□ -2.03
SRP1YNL189W BIO4P53630 237 aa2.4□□□□□ -2.03
SRP1YNL189W YNR066CP53752 436 aa2.4□□□□□ -2.03
SRP1YNL189W RRG8Q06109 277 aa2.4□□□□□ -2.03
SRP1YNL189W PFK27Q12471 397 aaPredicted RBP2.4□□□□□ -2.03
SRP1YNL189W DCP1Q12517 231 aaPredicted RBP2.4□□□□□ -2.03
SRP1YNL189W BI3Q9ZZW7 517 aa2.4□□□□□ -2.03
SRP1YNL189W DBP3P20447 523 aaKnown RBP2.39□□□□□ -2.03
SRP1YNL189W FRM2P37261 193 aa2.39□□□□□ -2.03
SRP1YNL189W EFM1P38732 585 aa2.39□□□□□ -2.03
SRP1YNL189W YHR035WP38769 630 aa2.39□□□□□ -2.03
SRP1YNL189W BDH1P39714 382 aa2.39□□□□□ -2.03
SRP1YNL189W UFE1P41834 346 aa2.39□□□□□ -2.03
SRP1YNL189W GCD14P46959 383 aaPredicted RBP2.39□□□□□ -2.03
SRP1YNL189W YGL185CP53100 379 aa2.39□□□□□ -2.03
SRP1YNL189W VOA1P53262 265 aa2.39□□□□□ -2.03
SRP1YNL189W DFM1Q12743 341 aaKnown RBP2.39□□□□□ -2.03
SRP1YNL189W YKL187CP34231 750 aa2.39□□□□□ -2.03
SRP1YNL189W GPX1P36014 167 aa2.39□□□□□ -2.03
SRP1YNL189W YMR262WP38430 313 aa2.39□□□□□ -2.03
SRP1YNL189W RRF1P38771 230 aa2.39□□□□□ -2.03
SRP1YNL189W LOC1P43586 204 aaPredicted RBP2.39□□□□□ -2.03
SRP1YNL189W YGR266WP53326 701 aa2.39□□□□□ -2.03
SRP1YNL189W HST4P53688 370 aa2.39□□□□□ -2.03
SRP1YNL189W MRX8Q05473 314 aa2.39□□□□□ -2.03
SRP1YNL189W APC9Q12107 265 aa2.39□□□□□ -2.03
SRP1YNL189W RAD7P06779 565 aa2.38□□□□□ -2.03
SRP1YNL189W DAL5P15365 543 aa2.38□□□□□ -2.03
SRP1YNL189W GPI12P23797 304 aa2.38□□□□□ -2.03
SRP1YNL189W YCR025CP25352 136 aa2.38□□□□□ -2.03
SRP1YNL189W INO2P26798 304 aa2.38□□□□□ -2.03
SRP1YNL189W SKG6P32900 734 aaPredicted RBP2.38□□□□□ -2.03
SRP1YNL189W MCH2P36032 473 aa2.38□□□□□ -2.03
SRP1YNL189W CTM1P38818 585 aa2.38□□□□□ -2.03
SRP1YNL189W APJ1P53940 528 aa2.38□□□□□ -2.03
SRP1YNL189W TAZ1Q06510 381 aa2.38□□□□□ -2.03
SRP1YNL189W DTD1Q07648 150 aaKnown RBP2.38□□□□□ -2.03
SRP1YNL189W YOR292CQ08743 309 aa2.38□□□□□ -2.03
SRP1YNL189W UTP23Q12339 254 aaKnown RBP2.38□□□□□ -2.03
SRP1YNL189W MRPL40P36534 297 aa2.37□□□□□ -2.03
SRP1YNL189W FRT2P39734 528 aa2.37□□□□□ -2.03
SRP1YNL189W PCL7P40186 285 aa2.37□□□□□ -2.03
SRP1YNL189W GDS1P41913 522 aa2.37□□□□□ -2.03
SRP1YNL189W MRPL23Q12487 163 aaPredicted RBP2.37□□□□□ -2.03
SRP1YNL189W TDH3P00359 332 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
SRP1YNL189W RPL31AP0C2H8 113 aaKnown RBP2.36□□□□□ -2.03
SRP1YNL189W UGA1P17649 471 aa2.36□□□□□ -2.03
SRP1YNL189W SAR1P20606 190 aaKnown RBP2.36□□□□□ -2.03
SRP1YNL189W RPL5P26321 297 aaKnown RBP2.36□□□□□ -2.03
SRP1YNL189W ZIP1P31111 875 aa2.36□□□□□ -2.03
SRP1YNL189W TPS2P31688 896 aaKnown RBP2.36□□□□□ -2.03
SRP1YNL189W SWD2P36104 329 aaPredicted RBP2.36□□□□□ -2.03
SRP1YNL189W TRR2P38816 342 aa2.36□□□□□ -2.03
SRP1YNL189W UBC13P52490 153 aa2.36□□□□□ -2.03
SRP1YNL189W SPO19Q03029 223 aa2.36□□□□□ -2.03
SRP1YNL189W GMC1Q04399 608 aa2.36□□□□□ -2.03
SRP1YNL189W APC4Q04601 652 aa2.36□□□□□ -2.03
SRP1YNL189W YLR446WQ06204 433 aa2.36□□□□□ -2.03
SRP1YNL189W RPC25P35718 212 aa2.35□□□□□ -2.03
SRP1YNL189W PFS2P42841 465 aaKnown RBP2.35□□□□□ -2.03
SRP1YNL189W YGL118CP53132 145 aa2.35□□□□□ -2.03
SRP1YNL189W CAX4P53223 239 aa2.35□□□□□ -2.03
SRP1YNL189W ACT1P60010 375 aaKnown RBP2.35□□□□□ -2.03
SRP1YNL189W SMD1Q02260 146 aaPredicted RBP2.35□□□□□ -2.03
SRP1YNL189W SEC13Q04491 297 aaKnown RBP2.35□□□□□ -2.03
SRP1YNL189W YPL245WQ12179 454 aaKnown RBP2.35□□□□□ -2.03
SRP1YNL189W SIA1Q12212 622 aa2.35□□□□□ -2.03
SRP1YNL189W CPT1P17898 393 aa2.35□□□□□ -2.03
SRP1YNL189W CSM1P25651 190 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms