RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C GPI17Q04080 534 aa2.24□□□□□ -2.05
SGS1YMR190C IRC19Q07843 230 aa2.24□□□□□ -2.05
SGS1YMR190C PST2Q12335 198 aaKnown RBP2.24□□□□□ -2.05
SGS1YMR190C PRP46Q12417 451 aaPredicted RBP2.24□□□□□ -2.05
SGS1YMR190C RAS2P01120 322 aaKnown RBP2.24□□□□□ -2.05
SGS1YMR190C CTA1P15202 515 aa2.24□□□□□ -2.05
SGS1YMR190C DPB2P24482 689 aaPredicted RBP2.24□□□□□ -2.05
SGS1YMR190C NGG1P32494 702 aa2.24□□□□□ -2.05
SGS1YMR190C MNS1P32906 549 aa2.24□□□□□ -2.05
SGS1YMR190C YPK3P38070 525 aa2.24□□□□□ -2.05
SGS1YMR190C INM1P38710 295 aa2.24□□□□□ -2.05
SGS1YMR190C THO1P40040 218 aaKnown RBP2.24□□□□□ -2.05
SGS1YMR190C SNM1P40993 198 aa2.24□□□□□ -2.05
SGS1YMR190C UPF3P48412 387 aaKnown RBP2.24□□□□□ -2.05
SGS1YMR190C IMD4P50094 524 aaKnown RBP2.24□□□□□ -2.05
SGS1YMR190C TEX1P53851 422 aaKnown RBP2.24□□□□□ -2.05
SGS1YMR190C OAZ1Q02803 292 aa2.24□□□□□ -2.05
SGS1YMR190C PRP3Q03338 469 aaPredicted RBP2.24□□□□□ -2.05
SGS1YMR190C PEX12Q04370 399 aa2.24□□□□□ -2.05
SGS1YMR190C SRL1Q08673 210 aa2.24□□□□□ -2.05
SGS1YMR190C SNF8Q12483 233 aa2.24□□□□□ -2.05
SGS1YMR190C URE2P23202 354 aaKnown RBP2.24□□□□□ -2.05
SGS1YMR190C RNQ1P25367 405 aa2.24□□□□□ -2.05
SGS1YMR190C PEX3P28795 441 aa2.24□□□□□ -2.05
SGS1YMR190C ITR1P30605 584 aa2.24□□□□□ -2.05
SGS1YMR190C SAC1P32368 623 aaKnown RBP2.24□□□□□ -2.05
SGS1YMR190C SOF1P33750 489 aaKnown RBP2.24□□□□□ -2.05
SGS1YMR190C EGD2P38879 174 aaKnown RBP2.24□□□□□ -2.05
SGS1YMR190C MSS2P40990 351 aa2.24□□□□□ -2.05
SGS1YMR190C ECM27P47144 725 aa2.24□□□□□ -2.05
SGS1YMR190C UBC9P50623 157 aaPredicted RBP2.24□□□□□ -2.05
SGS1YMR190C YGR067CP53243 804 aa2.24□□□□□ -2.05
SGS1YMR190C RBG2P53295 368 aaKnown RBP2.24□□□□□ -2.05
SGS1YMR190C YPL107WQ02873 248 aa2.24□□□□□ -2.05
SGS1YMR190C SPC19Q03954 165 aa2.24□□□□□ -2.05
SGS1YMR190C DBP9Q06218 594 aaKnown RBP2.24□□□□□ -2.05
SGS1YMR190C RSC58Q07979 502 aa2.24□□□□□ -2.05
SGS1YMR190C GEP3Q08622 556 aa2.24□□□□□ -2.05
SGS1YMR190C VIK1Q12045 647 aa2.24□□□□□ -2.05
SGS1YMR190C TFS1P14306 219 aa2.23□□□□□ -2.05
SGS1YMR190C POP5P28005 173 aa2.23□□□□□ -2.05
SGS1YMR190C PEP12P32854 288 aa2.23□□□□□ -2.05
SGS1YMR190C GPX1P36014 167 aa2.23□□□□□ -2.05
SGS1YMR190C MNN2P38069 597 aa2.23□□□□□ -2.05
SGS1YMR190C YLF2P38746 405 aa2.23□□□□□ -2.05
SGS1YMR190C YHR177WP38867 453 aa2.23□□□□□ -2.05
SGS1YMR190C YEL068CP39977 110 aa2.23□□□□□ -2.05
SGS1YMR190C CAK1P43568 368 aaPredicted RBP2.23□□□□□ -2.05
SGS1YMR190C YLR345WQ06137 509 aa2.23□□□□□ -2.05
SGS1YMR190C MHR1Q06630 226 aa2.23□□□□□ -2.05
SGS1YMR190C USB1Q12208 290 aaKnown RBP2.23□□□□□ -2.05
SGS1YMR190C TSC13Q99190 310 aa2.23□□□□□ -2.05
SGS1YMR190C Q0297Q9ZZV8 51 aa2.23□□□□□ -2.05
SGS1YMR190C TIM9O74700 87 aa2.23□□□□□ -2.05
SGS1YMR190C ARF1P11076 181 aaKnown RBP2.23□□□□□ -2.05
SGS1YMR190C RRP7P25368 297 aaPredicted RBP2.23□□□□□ -2.05
SGS1YMR190C UBC8P28263 218 aa2.23□□□□□ -2.05
SGS1YMR190C AFG1P32317 509 aa2.23□□□□□ -2.05
SGS1YMR190C LHP1P33399 275 aaKnown RBP2.23□□□□□ -2.05
SGS1YMR190C SRY1P36007 326 aa2.23□□□□□ -2.05
SGS1YMR190C SPC42P36094 363 aa2.23□□□□□ -2.05
SGS1YMR190C SRL3P36167 246 aa2.23□□□□□ -2.05
SGS1YMR190C ARB1P40024 610 aaKnown RBP2.23□□□□□ -2.05
SGS1YMR190C PRM8P53174 237 aa2.23□□□□□ -2.05
SGS1YMR190C SCW11P53189 542 aa2.23□□□□□ -2.05
SGS1YMR190C DTD1Q07648 150 aaKnown RBP2.23□□□□□ -2.05
SGS1YMR190C FMP40Q08968 688 aaPredicted RBP2.23□□□□□ -2.05
SGS1YMR190C RPC40P07703 335 aaKnown RBP2.23□□□□□ -2.05
SGS1YMR190C CKA1P15790 372 aa2.23□□□□□ -2.05
SGS1YMR190C ITR2P30606 609 aa2.23□□□□□ -2.05
SGS1YMR190C ZUO1P32527 433 aaKnown RBP2.23□□□□□ -2.05
SGS1YMR190C MTR2P34232 184 aaKnown RBP2.23□□□□□ -2.05
SGS1YMR190C ECM4P36156 370 aa2.23□□□□□ -2.05
SGS1YMR190C CBP4P37267 147 aa2.23□□□□□ -2.05
SGS1YMR190C FAR7P43592 221 aa2.23□□□□□ -2.05
SGS1YMR190C PAC10P48363 199 aa2.23□□□□□ -2.05
SGS1YMR190C FHN1P53279 174 aa2.23□□□□□ -2.05
SGS1YMR190C CRZ1P53968 678 aa2.23□□□□□ -2.05
SGS1YMR190C MET31Q03081 177 aa2.23□□□□□ -2.05
SGS1YMR190C RCF1Q03713 159 aa2.23□□□□□ -2.05
SGS1YMR190C TSA2Q04120 196 aa2.23□□□□□ -2.05
SGS1YMR190C SWF1Q04629 336 aa2.23□□□□□ -2.05
SGS1YMR190C YMR226CQ05016 267 aaKnown RBP2.23□□□□□ -2.05
SGS1YMR190C ISR1Q06098 443 aaKnown RBP2.23□□□□□ -2.05
SGS1YMR190C SPO77Q06134 477 aa2.23□□□□□ -2.05
SGS1YMR190C NFI1Q12216 726 aa2.23□□□□□ -2.05
SGS1YMR190C MRX4Q12467 430 aa2.23□□□□□ -2.05
SGS1YMR190C SKS1Q12505 502 aa2.23□□□□□ -2.05
SGS1YMR190C YGR161W-CQ3E744 92 aa2.23□□□□□ -2.05
SGS1YMR190C TAD3Q9URQ3 322 aa2.23□□□□□ -2.05
SGS1YMR190C PDE2P06776 526 aa2.23□□□□□ -2.05
SGS1YMR190C KGD1P20967 1014 aaKnown RBP2.23□□□□□ -2.05
SGS1YMR190C ARO2P28777 376 aaKnown RBP2.23□□□□□ -2.05
SGS1YMR190C ATS1P31386 333 aa2.23□□□□□ -2.05
SGS1YMR190C PRP21P32524 280 aaPredicted RBP2.23□□□□□ -2.05
SGS1YMR190C BNA4P38169 460 aa2.23□□□□□ -2.05
SGS1YMR190C RRP4P38792 359 aaKnown RBP2.23□□□□□ -2.05
SGS1YMR190C SOL3P38858 249 aa2.23□□□□□ -2.05
SGS1YMR190C YAR028WP39548 234 aa2.23□□□□□ -2.05
SGS1YMR190C SGN1P40561 250 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms