RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C QCR6P00127 147 aa2.68□□□□□ -1.98
SUB1YMR039C FRS2P15625 503 aaKnown RBP2.68□□□□□ -1.98
SUB1YMR039C CSM1P25651 190 aa2.68□□□□□ -1.98
SUB1YMR039C GCG1P32656 232 aaKnown RBP2.68□□□□□ -1.98
SUB1YMR039C TAE1P38340 232 aa2.68□□□□□ -1.98
SUB1YMR039C HIS2P38635 335 aa2.68□□□□□ -1.98
SUB1YMR039C YHR035WP38769 630 aa2.68□□□□□ -1.98
SUB1YMR039C DSE1P40077 573 aa2.68□□□□□ -1.98
SUB1YMR039C KAP114P53067 1004 aa2.68□□□□□ -1.98
SUB1YMR039C SPP2Q02521 185 aa2.68□□□□□ -1.98
SUB1YMR039C SRL4Q03085 281 aa2.68□□□□□ -1.98
SUB1YMR039C GMC2Q06201 188 aa2.68□□□□□ -1.98
SUB1YMR039C GPN3Q06543 272 aa2.68□□□□□ -1.98
SUB1YMR039C PRP46Q12417 451 aaPredicted RBP2.68□□□□□ -1.98
SUB1YMR039C ATP6P00854 259 aa2.67□□□□□ -1.98
SUB1YMR039C RPS18AP0CX55 146 aaKnown RBP2.67□□□□□ -1.98
SUB1YMR039C RPS18BP0CX56 146 aaPredicted RBP2.67□□□□□ -1.98
SUB1YMR039C CMK2P22517 447 aa2.67□□□□□ -1.98
SUB1YMR039C MEI5P32489 222 aa2.67□□□□□ -1.98
SUB1YMR039C SPO23P33757 523 aa2.67□□□□□ -1.98
SUB1YMR039C YNL320WP42840 284 aa2.67□□□□□ -1.98
SUB1YMR039C PFS2P42841 465 aaKnown RBP2.67□□□□□ -1.98
SUB1YMR039C YCH1P42937 148 aa2.67□□□□□ -1.98
SUB1YMR039C FMP33P46998 180 aa2.67□□□□□ -1.98
SUB1YMR039C RPL21AQ02753 160 aaKnown RBP2.67□□□□□ -1.98
SUB1YMR039C YPL080CQ02826 108 aa2.67□□□□□ -1.98
SUB1YMR039C IRC4Q03036 179 aa2.67□□□□□ -1.98
SUB1YMR039C APC9Q12107 265 aa2.67□□□□□ -1.98
SUB1YMR039C MCT1Q12283 360 aa2.67□□□□□ -1.98
SUB1YMR039C YPS3Q12303 508 aa2.67□□□□□ -1.98
SUB1YMR039C RPL21BQ12672 160 aaKnown RBP2.67□□□□□ -1.98
SUB1YMR039C HEM4P06174 275 aa2.66□□□□□ -1.98
SUB1YMR039C HPR1P17629 752 aaKnown RBP2.66□□□□□ -1.98
SUB1YMR039C SWD2P36104 329 aaPredicted RBP2.66□□□□□ -1.98
SUB1YMR039C SOL2P37262 315 aa2.66□□□□□ -1.98
SUB1YMR039C TDA11P38854 504 aa2.66□□□□□ -1.98
SUB1YMR039C YER184CP39961 794 aa2.66□□□□□ -1.98
SUB1YMR039C FMC1P40491 155 aa2.66□□□□□ -1.98
SUB1YMR039C AGP3P43548 558 aa2.66□□□□□ -1.98
SUB1YMR039C YFL040WP43562 540 aa2.66□□□□□ -1.98
SUB1YMR039C SEH1P53011 349 aaKnown RBP2.66□□□□□ -1.98
SUB1YMR039C LSG1P53145 640 aaKnown RBP2.66□□□□□ -1.98
SUB1YMR039C LSB1P53281 241 aa2.66□□□□□ -1.98
SUB1YMR039C HCH1P53834 153 aa2.66□□□□□ -1.98
SUB1YMR039C YPL077CQ02831 240 aa2.66□□□□□ -1.98
SUB1YMR039C ENT5Q03769 411 aaKnown RBP2.66□□□□□ -1.98
SUB1YMR039C YHC1Q05900 231 aaKnown RBP2.66□□□□□ -1.98
SUB1YMR039C YDL109CQ12103 647 aa2.66□□□□□ -1.98
SUB1YMR039C TY3A-GQ12173 290 aa2.66□□□□□ -1.98
SUB1YMR039C YOL107WQ12239 342 aa2.66□□□□□ -1.98
SUB1YMR039C TY3A-IQ99219 290 aa2.66□□□□□ -1.98
SUB1YMR039C IZH4Q99393 312 aa2.66□□□□□ -1.98
SUB1YMR039C COX2P00410 251 aa2.65□□□□□ -1.99
SUB1YMR039C MSF1P08425 469 aa2.65□□□□□ -1.99
SUB1YMR039C CTA1P15202 515 aa2.65□□□□□ -1.99
SUB1YMR039C RPB4P20433 221 aaPredicted RBP2.65□□□□□ -1.99
SUB1YMR039C YSR3P23501 404 aa2.65□□□□□ -1.99
SUB1YMR039C ZIP1P31111 875 aa2.65□□□□□ -1.99
SUB1YMR039C FMT1P32785 401 aa2.65□□□□□ -1.99
SUB1YMR039C ZRT1P32804 376 aa2.65□□□□□ -1.99
SUB1YMR039C TCD1P38756 429 aa2.65□□□□□ -1.99
SUB1YMR039C PEX22P39718 180 aa2.65□□□□□ -1.99
SUB1YMR039C BNA6P43619 295 aa2.65□□□□□ -1.99
SUB1YMR039C YAR1P46683 200 aa2.65□□□□□ -1.99
SUB1YMR039C PMT4P46971 762 aa2.65□□□□□ -1.99
SUB1YMR039C IGO1P53897 168 aa2.65□□□□□ -1.99
SUB1YMR039C YNL134CP53912 376 aaKnown RBP2.65□□□□□ -1.99
SUB1YMR039C SED5Q01590 340 aa2.65□□□□□ -1.99
SUB1YMR039C PET117Q02771 107 aa2.65□□□□□ -1.99
SUB1YMR039C COX20Q04935 205 aa2.65□□□□□ -1.99
SUB1YMR039C PBP4Q07362 185 aaKnown RBP2.65□□□□□ -1.99
SUB1YMR039C YLR012CQ07927 99 aa2.65□□□□□ -1.99
SUB1YMR039C DDC1Q08949 612 aa2.65□□□□□ -1.99
SUB1YMR039C BTS1Q12051 335 aa2.65□□□□□ -1.99
SUB1YMR039C ERP3Q12403 225 aa2.65□□□□□ -1.99
SUB1YMR039C ASP3-2P0CX77 362 aa2.64□□□□□ -1.99
SUB1YMR039C ASP3-3P0CX78 362 aa2.64□□□□□ -1.99
SUB1YMR039C ASP3-4P0CX79 362 aa2.64□□□□□ -1.99
SUB1YMR039C ASP3-1P0CZ17 362 aa2.64□□□□□ -1.99
SUB1YMR039C RRT12P25381 491 aa2.64□□□□□ -1.99
SUB1YMR039C RAD51P25454 400 aa2.64□□□□□ -1.99
SUB1YMR039C COS9P36034 407 aa2.64□□□□□ -1.99
SUB1YMR039C CIN2P46670 268 aa2.64□□□□□ -1.99
SUB1YMR039C CTK3P46963 296 aaPredicted RBP2.64□□□□□ -1.99
SUB1YMR039C SWC4P53201 476 aa2.64□□□□□ -1.99
SUB1YMR039C PRP38Q00723 242 aaPredicted RBP2.64□□□□□ -1.99
SUB1YMR039C TRM82Q03774 444 aa2.64□□□□□ -1.99
SUB1YMR039C CTS2Q06350 511 aa2.64□□□□□ -1.99
SUB1YMR039C YPR172WQ06608 200 aa2.64□□□□□ -1.99
SUB1YMR039C DTD1Q07648 150 aaKnown RBP2.64□□□□□ -1.99
SUB1YMR039C RDL2Q08742 149 aaKnown RBP2.64□□□□□ -1.99
SUB1YMR039C RFM1Q12192 310 aa2.64□□□□□ -1.99
SUB1YMR039C SFM1Q12314 213 aa2.64□□□□□ -1.99
SUB1YMR039C TDH3P00359 332 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99not detected
SUB1YMR039C ILV1P00927 576 aaKnown RBP2.63□□□□□ -1.99
SUB1YMR039C RAD3P06839 778 aa2.63□□□□□ -1.99
SUB1YMR039C RPL23AP0CX41 137 aaKnown RBP2.63□□□□□ -1.99
SUB1YMR039C RPL23BP0CX42 137 aaKnown RBP2.63□□□□□ -1.99
SUB1YMR039C POL30P15873 258 aaKnown RBP2.63□□□□□ -1.99
SUB1YMR039C TPS2P31688 896 aaKnown RBP2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms