RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C SUS1Q6WNK7 96 aa8.33□□□□□ -1.08
SEC61YLR378C KIN28P06242 306 aa8.32□□□□□ -1.08
SEC61YLR378C SIR2P06700 562 aa8.32□□□□□ -1.08
SEC61YLR378C EMP70P32802 667 aa8.32□□□□□ -1.08
SEC61YLR378C MSN4P33749 630 aa8.32□□□□□ -1.08
SEC61YLR378C CHK1P38147 527 aa8.32□□□□□ -1.08
SEC61YLR378C YHK8P38776 514 aa8.32□□□□□ -1.08
SEC61YLR378C MLH1P38920 769 aa8.32□□□□□ -1.08
SEC61YLR378C BAP3P41815 604 aa8.32□□□□□ -1.08
SEC61YLR378C BPL1P48445 690 aaPredicted RBP8.32□□□□□ -1.08
SEC61YLR378C PAU12P53343 120 aa8.32□□□□□ -1.08
SEC61YLR378C CUZ1P53899 274 aa8.32□□□□□ -1.08
SEC61YLR378C RSM24Q03976 319 aa8.32□□□□□ -1.08
SEC61YLR378C PEX10Q05568 337 aa8.32□□□□□ -1.08
SEC61YLR378C TAZ1Q06510 381 aa8.32□□□□□ -1.08
SEC61YLR378C CYK3Q07533 885 aa8.32□□□□□ -1.08
SEC61YLR378C BDS1Q08347 646 aa8.32□□□□□ -1.08
SEC61YLR378C PEX27Q08580 376 aa8.32□□□□□ -1.08
SEC61YLR378C TY1A-NL1Q12391 440 aaKnown RBP8.32□□□□□ -1.08
SEC61YLR378C YPT1P01123 206 aaKnown RBP8.31□□□□□ -1.08
SEC61YLR378C PRE7P23724 241 aaKnown RBP8.31□□□□□ -1.08
SEC61YLR378C EXG1P23776 448 aaKnown RBP8.31□□□□□ -1.08
SEC61YLR378C MDH3P32419 343 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
SEC61YLR378C HSP150P32478 413 aa8.31□□□□□ -1.08
SEC61YLR378C MAL32P38158 584 aa8.31□□□□□ -1.08
SEC61YLR378C MBA1P38300 278 aa8.31□□□□□ -1.08
SEC61YLR378C RPP1P38786 293 aa8.31□□□□□ -1.08
SEC61YLR378C IPI1P38803 334 aaPredicted RBP8.31□□□□□ -1.08
SEC61YLR378C YER184CP39961 794 aa8.31□□□□□ -1.08
SEC61YLR378C PMT3P47190 753 aa8.31□□□□□ -1.08
SEC61YLR378C PXR1P53335 271 aaPredicted RBP8.31□□□□□ -1.08
SEC61YLR378C MAL12P53341 584 aa8.31□□□□□ -1.08
SEC61YLR378C SEI1Q06058 285 aa8.31□□□□□ -1.08
SEC61YLR378C SET6Q12529 373 aa8.31□□□□□ -1.08
SEC61YLR378C HAA1Q12753 694 aaKnown RBP8.31□□□□□ -1.08
SEC61YLR378C FUN19P28003 413 aaPredicted RBP8.3□□□□□ -1.08
SEC61YLR378C VPS17P32913 551 aa8.3□□□□□ -1.08
SEC61YLR378C SHE2P36068 246 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
SEC61YLR378C MRPL16P38064 232 aa8.3□□□□□ -1.08
SEC61YLR378C YBR137WP38276 179 aa8.3□□□□□ -1.08
SEC61YLR378C PPT1P53043 513 aa8.3□□□□□ -1.08
SEC61YLR378C MPP6P53725 186 aaPredicted RBP8.3□□□□□ -1.08
SEC61YLR378C NUP116Q02630 1113 aa8.3□□□□□ -1.08
SEC61YLR378C YDR249CQ03787 373 aa8.3□□□□□ -1.08
SEC61YLR378C RGC1Q06108 1083 aaKnown RBP8.3□□□□□ -1.08
SEC61YLR378C BRE4Q07660 1125 aa8.3□□□□□ -1.08
SEC61YLR378C AIM6Q07716 390 aa8.3□□□□□ -1.08
SEC61YLR378C RDR1Q08904 546 aa8.3□□□□□ -1.08
SEC61YLR378C BTS1Q12051 335 aa8.3□□□□□ -1.08
SEC61YLR378C RLM1Q12224 676 aa8.3□□□□□ -1.08
SEC61YLR378C YLR099W-AQ3E798 87 aa8.3□□□□□ -1.08
SEC61YLR378C FMP27Q06179 2628 aa8.3□□□□□ -1.08
SEC61YLR378C PDE2P06776 526 aa8.29□□□□□ -1.08
SEC61YLR378C SEF1P34228 1148 aa8.29□□□□□ -1.08
SEC61YLR378C YKR073CP36153 106 aa8.29□□□□□ -1.08
SEC61YLR378C THI2P38141 450 aa8.29□□□□□ -1.08
SEC61YLR378C PAU24P38155 120 aa8.29□□□□□ -1.08
SEC61YLR378C UBS1P38290 277 aa8.29□□□□□ -1.08
SEC61YLR378C MIT1P40002 666 aa8.29□□□□□ -1.08
SEC61YLR378C YNL208WP40159 199 aaKnown RBP8.29□□□□□ -1.08
SEC61YLR378C VNX1P42839 908 aa8.29□□□□□ -1.08
SEC61YLR378C ATG18P43601 500 aa8.29□□□□□ -1.08
SEC61YLR378C YAT1P80235 687 aa8.29□□□□□ -1.08
SEC61YLR378C MRPL1Q04599 285 aa8.29□□□□□ -1.08
SEC61YLR378C BUR2Q05949 395 aa8.29□□□□□ -1.08
SEC61YLR378C HRT1Q08273 121 aa8.29□□□□□ -1.08
SEC61YLR378C YOR378WQ08902 515 aa8.29□□□□□ -1.08
SEC61YLR378C AKR2Q12013 749 aa8.29□□□□□ -1.08
SEC61YLR378C FRE6Q12473 712 aa8.29□□□□□ -1.08
SEC61YLR378C QCR7P00128 127 aa8.29□□□□□ -1.08
SEC61YLR378C CAP2P13517 287 aa8.29□□□□□ -1.08
SEC61YLR378C GAS1P22146 559 aaKnown RBP8.29□□□□□ -1.08
SEC61YLR378C RAD51P25454 400 aa8.29□□□□□ -1.08
SEC61YLR378C PUT3P25502 979 aaPredicted RBP8.29□□□□□ -1.08
SEC61YLR378C PTC6P25646 442 aa8.29□□□□□ -1.08
SEC61YLR378C ZRT3P34240 503 aa8.29□□□□□ -1.08
SEC61YLR378C CCZ1P38273 704 aa8.29□□□□□ -1.08
SEC61YLR378C YFR054CP43622 192 aa8.29□□□□□ -1.08
SEC61YLR378C MRH4P53166 561 aa8.29□□□□□ -1.08
SEC61YLR378C IMO32P53219 342 aa8.29□□□□□ -1.08
SEC61YLR378C TRS23Q03784 219 aa8.29□□□□□ -1.08
SEC61YLR378C MRPL51Q06090 140 aaPredicted RBP8.29□□□□□ -1.08
SEC61YLR378C IRC19Q07843 230 aa8.29□□□□□ -1.08
SEC61YLR378C RRG7Q08774 242 aaPredicted RBP8.29□□□□□ -1.08
SEC61YLR378C YPL199CQ08954 240 aa8.29□□□□□ -1.08
SEC61YLR378C PIN2Q12057 282 aa8.29□□□□□ -1.08
SEC61YLR378C BAG7Q12128 409 aa8.29□□□□□ -1.08
SEC61YLR378C YIL046W-AQ3E7Z4 54 aa8.29□□□□□ -1.08
SEC61YLR378C PEP4P07267 405 aaKnown RBP8.28□□□□□ -1.08
SEC61YLR378C HMG1P12683 1054 aa8.28□□□□□ -1.08
SEC61YLR378C STE4P18851 423 aa8.28□□□□□ -1.08
SEC61YLR378C RPA135P22138 1203 aaKnown RBP8.28□□□□□ -1.08
SEC61YLR378C AIM17P23180 465 aaKnown RBP8.28□□□□□ -1.08
SEC61YLR378C SPT14P32363 452 aa8.28□□□□□ -1.08
SEC61YLR378C DOA4P32571 926 aa8.28□□□□□ -1.08
SEC61YLR378C PAD1P33751 242 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
SEC61YLR378C WBP1P33767 430 aaKnown RBP8.28□□□□□ -1.08
SEC61YLR378C IRC18P47056 224 aa8.28□□□□□ -1.08
SEC61YLR378C PMT5P52867 743 aa8.28□□□□□ -1.08
SEC61YLR378C PEX25Q02969 394 aa8.28□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 119.5 ms