RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C MHP1P43638 1398 aa1.25□□□□□ -2.21
RPL40BYKR094C RPL24AP04449 155 aaKnown RBP1.25□□□□□ -2.21
RPL40BYKR094C SSA3P09435 649 aaKnown RBP1.25□□□□□ -2.21
RPL40BYKR094C YSR3P23501 404 aa1.25□□□□□ -2.21
RPL40BYKR094C MIR1P23641 311 aaKnown RBP1.25□□□□□ -2.21
RPL40BYKR094C GPI12P23797 304 aa1.25□□□□□ -2.21
RPL40BYKR094C RPL16BP26785 198 aaKnown RBP1.25□□□□□ -2.21
RPL40BYKR094C INO2P26798 304 aa1.25□□□□□ -2.21
RPL40BYKR094C DEP1P31385 405 aa1.25□□□□□ -2.21
RPL40BYKR094C YUH1P35127 236 aa1.25□□□□□ -2.21
RPL40BYKR094C HIS2P38635 335 aa1.25□□□□□ -2.21
RPL40BYKR094C YHR035WP38769 630 aa1.25□□□□□ -2.21
RPL40BYKR094C PEX22P39718 180 aa1.25□□□□□ -2.21
RPL40BYKR094C YIA6P40556 373 aa1.25□□□□□ -2.21
RPL40BYKR094C INA22P40576 216 aa1.25□□□□□ -2.21
RPL40BYKR094C CIN2P46670 268 aa1.25□□□□□ -2.21
RPL40BYKR094C CTK3P46963 296 aaPredicted RBP1.25□□□□□ -2.21
RPL40BYKR094C SEH1P53011 349 aaKnown RBP1.25□□□□□ -2.21
RPL40BYKR094C MND1P53102 219 aa1.25□□□□□ -2.21
RPL40BYKR094C LSG1P53145 640 aaKnown RBP1.25□□□□□ -2.21
RPL40BYKR094C RNH201P53942 307 aa1.25□□□□□ -2.21
RPL40BYKR094C TRM82Q03774 444 aa1.25□□□□□ -2.21
RPL40BYKR094C UBX2Q04228 584 aa1.25□□□□□ -2.21
RPL40BYKR094C CSI1Q04368 295 aa1.25□□□□□ -2.21
RPL40BYKR094C ERV41Q04651 352 aa1.25□□□□□ -2.21
RPL40BYKR094C BCP1Q06338 283 aa1.25□□□□□ -2.21
RPL40BYKR094C GPN3Q06543 272 aa1.25□□□□□ -2.21
RPL40BYKR094C DTD1Q07648 150 aaKnown RBP1.25□□□□□ -2.21
RPL40BYKR094C ALE1Q08548 619 aa1.25□□□□□ -2.21
RPL40BYKR094C SFM1Q12314 213 aa1.25□□□□□ -2.21
RPL40BYKR094C UTP23Q12339 254 aaKnown RBP1.25□□□□□ -2.21
RPL40BYKR094C SSK22P25390 1331 aaPredicted RBP1.24□□□□□ -2.21
RPL40BYKR094C ILV1P00927 576 aaKnown RBP1.24□□□□□ -2.21
RPL40BYKR094C UNG1P12887 359 aa1.24□□□□□ -2.21
RPL40BYKR094C MSS116P15424 664 aaKnown RBP1.24□□□□□ -2.21
RPL40BYKR094C BGL2P15703 313 aaKnown RBP1.24□□□□□ -2.21
RPL40BYKR094C CMK2P22517 447 aa1.24□□□□□ -2.21
RPL40BYKR094C MEK1P24719 497 aaPredicted RBP1.24□□□□□ -2.21
RPL40BYKR094C SKG6P32900 734 aaPredicted RBP1.24□□□□□ -2.21
RPL40BYKR094C YKL063CP35725 167 aa1.24□□□□□ -2.21
RPL40BYKR094C YKL070WP36087 169 aa1.24□□□□□ -2.21
RPL40BYKR094C CTM1P38818 585 aa1.24□□□□□ -2.21
RPL40BYKR094C STB1P42845 420 aa1.24□□□□□ -2.21
RPL40BYKR094C YCH1P42937 148 aa1.24□□□□□ -2.21
RPL40BYKR094C YFL040WP43562 540 aa1.24□□□□□ -2.21
RPL40BYKR094C LOC1P43586 204 aaPredicted RBP1.24□□□□□ -2.21
RPL40BYKR094C GCD14P46959 383 aaPredicted RBP1.24□□□□□ -2.21
RPL40BYKR094C CDH1P53197 566 aa1.24□□□□□ -2.21
RPL40BYKR094C SWC4P53201 476 aa1.24□□□□□ -2.21
RPL40BYKR094C OKP1P53298 406 aa1.24□□□□□ -2.21
RPL40BYKR094C PRP38Q00723 242 aaPredicted RBP1.24□□□□□ -2.21
RPL40BYKR094C ENT5Q03769 411 aaKnown RBP1.24□□□□□ -2.21
RPL40BYKR094C ATC1Q04005 294 aa1.24□□□□□ -2.21
RPL40BYKR094C SNX41Q04053 625 aa1.24□□□□□ -2.21
RPL40BYKR094C YDR115WQ04598 105 aa1.24□□□□□ -2.21
RPL40BYKR094C YHC1Q05900 231 aaKnown RBP1.24□□□□□ -2.21
RPL40BYKR094C YLR177WQ06251 628 aa1.24□□□□□ -2.21
RPL40BYKR094C BER1Q06688 274 aaKnown RBP1.24□□□□□ -2.21
RPL40BYKR094C SRO7Q12038 1033 aa1.24□□□□□ -2.21
RPL40BYKR094C POM33Q12164 279 aa1.24□□□□□ -2.21
RPL40BYKR094C ATP16Q12165 160 aa1.24□□□□□ -2.21
RPL40BYKR094C FRE8Q12209 686 aa1.24□□□□□ -2.21
RPL40BYKR094C INO80P53115 1489 aa1.24□□□□□ -2.21
RPL40BYKR094C REP1P03871 373 aa1.23□□□□□ -2.21
RPL40BYKR094C RPS14AP06367 137 aaKnown RBP1.23□□□□□ -2.21
RPL40BYKR094C MRP1P10662 321 aaKnown RBP1.23□□□□□ -2.21
RPL40BYKR094C SPS100P13130 326 aa1.23□□□□□ -2.21
RPL40BYKR094C CHA1P25379 360 aaKnown RBP1.23□□□□□ -2.21
RPL40BYKR094C COT1P32798 439 aa1.23□□□□□ -2.21
RPL40BYKR094C YKL162CP36052 402 aa1.23□□□□□ -2.21
RPL40BYKR094C SMF2P38778 549 aa1.23□□□□□ -2.21
RPL40BYKR094C SPT8P38915 602 aa1.23□□□□□ -2.21
RPL40BYKR094C PET100P38958 111 aa1.23□□□□□ -2.21
RPL40BYKR094C SMC2P38989 1170 aaKnown RBP1.23□□□□□ -2.21
RPL40BYKR094C RPS14BP39516 138 aaKnown RBP1.23□□□□□ -2.21
RPL40BYKR094C RCY1P39531 840 aa1.23□□□□□ -2.21
RPL40BYKR094C CDC40P40968 455 aaPredicted RBP1.23□□□□□ -2.21
RPL40BYKR094C BIO3P50277 480 aa1.23□□□□□ -2.21
RPL40BYKR094C VEL1P53058 206 aa1.23□□□□□ -2.21
RPL40BYKR094C YGL185CP53100 379 aa1.23□□□□□ -2.21
RPL40BYKR094C SED5Q01590 340 aa1.23□□□□□ -2.21
RPL40BYKR094C SPP2Q02521 185 aa1.23□□□□□ -2.21
RPL40BYKR094C YPL077CQ02831 240 aa1.23□□□□□ -2.21
RPL40BYKR094C RRN5Q02983 363 aa1.23□□□□□ -2.21
RPL40BYKR094C ECM18Q04623 453 aa1.23□□□□□ -2.21
RPL40BYKR094C ASR1Q06834 288 aa1.23□□□□□ -2.21
RPL40BYKR094C MRX9Q07349 420 aaKnown RBP1.23□□□□□ -2.21
RPL40BYKR094C RDL2Q08742 149 aaKnown RBP1.23□□□□□ -2.21
RPL40BYKR094C BTS1Q12051 335 aa1.23□□□□□ -2.21
RPL40BYKR094C APC9Q12107 265 aa1.23□□□□□ -2.21
RPL40BYKR094C YPL245WQ12179 454 aaKnown RBP1.23□□□□□ -2.21
RPL40BYKR094C RRP36Q12481 300 aaPredicted RBP1.23□□□□□ -2.21
RPL40BYKR094C YPR064WQ12492 139 aa1.23□□□□□ -2.21
RPL40BYKR094C FMP16Q12497 93 aa1.23□□□□□ -2.21
RPL40BYKR094C RPL31AP0C2H8 113 aaKnown RBP1.22□□□□□ -2.21
RPL40BYKR094C EPT1P22140 391 aa1.22□□□□□ -2.21
RPL40BYKR094C MRPL20P22354 195 aaPredicted RBP1.22□□□□□ -2.21
RPL40BYKR094C IFM1P25038 676 aa1.22□□□□□ -2.21
RPL40BYKR094C PMT2P31382 759 aa1.22□□□□□ -2.21
RPL40BYKR094C ECM34P38728 170 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 66.6 ms