RNA–Protein interactions for RNA: YKR065C

PAM17, Transcript of Constituent of the TIM23 complex, yeast

Gene PAM17, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM17	YKR065C	ARO9	P38840	513 aa	Predicted RBP	6.64	□□□□□ -1.35
PAM17	YKR065C	RCY1	P39531	840 aa		6.64	□□□□□ -1.35
PAM17	YKR065C	MET28	P40573	187 aa		6.64	□□□□□ -1.35
PAM17	YKR065C	ARF3	P40994	183 aa	RIP-Chip data	6.64	□□□□□ -1.35	not detected
PAM17	YKR065C	CUP9	P41817	306 aa		6.64	□□□□□ -1.35
PAM17	YKR065C	FAR7	P43592	221 aa		6.64	□□□□□ -1.35
PAM17	YKR065C	NAT4	Q04751	285 aa		6.64	□□□□□ -1.35
PAM17	YKR065C	YMR226C	Q05016	267 aa	Known RBP	6.64	□□□□□ -1.35
PAM17	YKR065C	AKR2	Q12013	749 aa		6.64	□□□□□ -1.35
PAM17	YKR065C	HER1	Q12276	1246 aa		6.64	□□□□□ -1.35
PAM17	YKR065C	MRX4	Q12467	430 aa		6.64	□□□□□ -1.35
PAM17	YKR065C	YSF3	P0C074	85 aa	Predicted RBP	6.63	□□□□□ -1.35
PAM17	YKR065C	YAK1	P14680	807 aa		6.63	□□□□□ -1.35
PAM17	YKR065C	MXR2	P25566	168 aa		6.63	□□□□□ -1.35
PAM17	YKR065C	AST1	P35183	429 aa		6.63	□□□□□ -1.35
PAM17	YKR065C	TEL1	P38110	2787 aa		6.63	□□□□□ -1.35
PAM17	YKR065C	SNL1	P40548	159 aa		6.63	□□□□□ -1.35
PAM17	YKR065C	CDH1	P53197	566 aa		6.63	□□□□□ -1.35
PAM17	YKR065C	YGR168C	P53293	376 aa		6.63	□□□□□ -1.35
PAM17	YKR065C	SPR6	Q01684	191 aa		6.63	□□□□□ -1.35
PAM17	YKR065C	SWP1	Q02795	286 aa		6.63	□□□□□ -1.35
PAM17	YKR065C	MDM30	Q05930	598 aa		6.63	□□□□□ -1.35
PAM17	YKR065C	YOR389W	Q08912	624 aa		6.63	□□□□□ -1.35
PAM17	YKR065C	YPL191C	Q08930	360 aa		6.63	□□□□□ -1.35
PAM17	YKR065C	YPL278C	Q08990	100 aa		6.63	□□□□□ -1.35
PAM17	YKR065C	CSF1	Q12150	2958 aa		6.62	□□□□□ -1.35
PAM17	YKR065C	SUI3	P09064	285 aa	Known RBP	6.62	□□□□□ -1.35
PAM17	YKR065C	KSS1	P14681	368 aa		6.62	□□□□□ -1.35
PAM17	YKR065C	FAR1	P21268	830 aa		6.62	□□□□□ -1.35
PAM17	YKR065C	RRP7	P25368	297 aa	Predicted RBP	6.62	□□□□□ -1.35
PAM17	YKR065C	RER1	P25560	188 aa		6.62	□□□□□ -1.35
PAM17	YKR065C	NTG1	P31378	399 aa		6.62	□□□□□ -1.35
PAM17	YKR065C	PTR2	P32901	601 aa		6.62	□□□□□ -1.35
PAM17	YKR065C	LHP1	P33399	275 aa	Known RBP	6.62	□□□□□ -1.35
PAM17	YKR065C	MPM1	P40364	252 aa		6.62	□□□□□ -1.35
PAM17	YKR065C	NUP57	P48837	541 aa		6.62	□□□□□ -1.35
PAM17	YKR065C	RMR1	P53060	241 aa		6.62	□□□□□ -1.35
PAM17	YKR065C	YGR067C	P53243	804 aa		6.62	□□□□□ -1.35
PAM17	YKR065C	DBP6	P53734	629 aa	Known RBP	6.62	□□□□□ -1.35
PAM17	YKR065C	CSL4	P53859	292 aa	Predicted RBP	6.62	□□□□□ -1.35
PAM17	YKR065C	HNT3	Q08702	217 aa		6.62	□□□□□ -1.35
PAM17	YKR065C	TPO4	Q12256	659 aa		6.62	□□□□□ -1.35
PAM17	YKR065C	APC2	Q12440	853 aa		6.62	□□□□□ -1.35
PAM17	YKR065C	PSF1	Q12488	208 aa		6.62	□□□□□ -1.35
PAM17	YKR065C	RPL20A	P0CX23	172 aa	Known RBP	6.61	□□□□□ -1.35
PAM17	YKR065C	RPL20B	P0CX24	172 aa	Predicted RBP	6.61	□□□□□ -1.35
PAM17	YKR065C	SNF4	P12904	322 aa		6.61	□□□□□ -1.35
PAM17	YKR065C	ATR1	P13090	542 aa		6.61	□□□□□ -1.35
PAM17	YKR065C	MCK1	P21965	375 aa	Known RBP	6.61	□□□□□ -1.35
PAM17	YKR065C	POL4	P25615	582 aa		6.61	□□□□□ -1.35
PAM17	YKR065C	MRPL6	P32904	214 aa		6.61	□□□□□ -1.35
PAM17	YKR065C	TUL1	P36096	758 aa		6.61	□□□□□ -1.35
PAM17	YKR065C	YBR139W	P38109	508 aa		6.61	□□□□□ -1.35
PAM17	YKR065C	SEC24	P40482	926 aa	Known RBP	6.61	□□□□□ -1.35
PAM17	YKR065C	UTP25	P40498	721 aa	Known RBP	6.61	□□□□□ -1.35
PAM17	YKR065C	IRC6	P43615	237 aa		6.61	□□□□□ -1.35
PAM17	YKR065C	YNL181W	P53878	407 aa		6.61	□□□□□ -1.35
PAM17	YKR065C	SKI8	Q02793	397 aa	Predicted RBP	6.61	□□□□□ -1.35
PAM17	YKR065C	DCI1	Q08558	271 aa		6.61	□□□□□ -1.35
PAM17	YKR065C	RIB3	Q99258	208 aa		6.61	□□□□□ -1.35
PAM17	YKR065C	YOL163W	P0CF20	169 aa		6.6	□□□□□ -1.35
PAM17	YKR065C	GPI12	P23797	304 aa		6.6	□□□□□ -1.35
PAM17	YKR065C	YIM1	P28625	365 aa		6.6	□□□□□ -1.35
PAM17	YKR065C	SSE2	P32590	693 aa	Known RBP	6.6	□□□□□ -1.35
PAM17	YKR065C	PDR3	P33200	976 aa		6.6	□□□□□ -1.35
PAM17	YKR065C	SNU114	P36048	1008 aa	Known RBP	6.6	□□□□□ -1.35
PAM17	YKR065C	SMK1	P41808	388 aa		6.6	□□□□□ -1.35
PAM17	YKR065C	MPC1	P53157	130 aa	Known RBP	6.6	□□□□□ -1.35
PAM17	YKR065C	DCP2	P53550	970 aa	Known RBP	6.6	□□□□□ -1.35
PAM17	YKR065C	NCE101	Q02820	53 aa		6.6	□□□□□ -1.35
PAM17	YKR065C	DCR2	Q05924	578 aa		6.6	□□□□□ -1.35
PAM17	YKR065C	YLR446W	Q06204	433 aa		6.6	□□□□□ -1.35
PAM17	YKR065C	FAS1	P07149	2051 aa	Known RBP	6.59	□□□□□ -1.35
PAM17	YKR065C	PET9	P18239	318 aa	Known RBP	6.59	□□□□□ -1.35
PAM17	YKR065C	YCR102C	P25608	368 aa		6.59	□□□□□ -1.35
PAM17	YKR065C	GDH2	P33327	1092 aa	Known RBP	6.59	□□□□□ -1.35
PAM17	YKR065C	VBA2	P38358	474 aa	Known RBP	6.59	□□□□□ -1.35
PAM17	YKR065C	MDE1	P47095	244 aa		6.59	□□□□□ -1.35
PAM17	YKR065C	OCA1	P50946	238 aa	Predicted RBP	6.59	□□□□□ -1.35
PAM17	YKR065C	SEH1	P53011	349 aa	Known RBP	6.59	□□□□□ -1.35
PAM17	YKR065C	TPC1	P53257	314 aa		6.59	□□□□□ -1.35
PAM17	YKR065C	RPL15B	P54780	204 aa	Predicted RBP	6.59	□□□□□ -1.35
PAM17	YKR065C	YSA1	Q01976	231 aa		6.59	□□□□□ -1.35
PAM17	YKR065C	NUP53	Q03790	475 aa		6.59	□□□□□ -1.35
PAM17	YKR065C	ERB1	Q04660	807 aa	Known RBP	6.59	□□□□□ -1.35
PAM17	YKR065C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	6.59	□□□□□ -1.35	not detected
PAM17	YKR065C	STP22	P25604	385 aa		6.58	□□□□□ -1.36
PAM17	YKR065C	HIR2	P32480	875 aa		6.58	□□□□□ -1.36
PAM17	YKR065C	SLM4	P38247	162 aa		6.58	□□□□□ -1.36
PAM17	YKR065C	SWD1	P39706	426 aa		6.58	□□□□□ -1.36
PAM17	YKR065C	SER3	P40054	469 aa		6.58	□□□□□ -1.36
PAM17	YKR065C	LSG1	P53145	640 aa	Known RBP	6.58	□□□□□ -1.36
PAM17	YKR065C	MTQ1	P53944	314 aa		6.58	□□□□□ -1.36
PAM17	YKR065C	SUR7	P54003	302 aa		6.58	□□□□□ -1.36
PAM17	YKR065C	ACS1	Q01574	713 aa		6.58	□□□□□ -1.36
PAM17	YKR065C	RAX1	Q08760	435 aa		6.58	□□□□□ -1.36
PAM17	YKR065C	FMP40	Q08968	688 aa	Predicted RBP	6.58	□□□□□ -1.36
PAM17	YKR065C	YDL211C	Q12121	372 aa		6.58	□□□□□ -1.36
PAM17	YKR065C	YOR342C	Q12182	319 aa		6.58	□□□□□ -1.36
PAM17	YKR065C	TIM9	O74700	87 aa		6.57	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms