RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W RHO5P53879 331 aaKnown RBP10.21□□□□□ -0.78
SIM1YIL123W GUP2Q08929 609 aa10.21□□□□□ -0.78
SIM1YIL123W MCP1Q12106 302 aa10.21□□□□□ -0.78
SIM1YIL123W SET6Q12529 373 aa10.21□□□□□ -0.78
SIM1YIL123W DAT1P13483 248 aaKnown RBP10.2□□□□□ -0.78
SIM1YIL123W PMT2P31382 759 aa10.2□□□□□ -0.78
SIM1YIL123W ACH1P32316 526 aa10.2□□□□□ -0.78
SIM1YIL123W VPS17P32913 551 aa10.2□□□□□ -0.78
SIM1YIL123W SLC1P33333 303 aa10.2□□□□□ -0.78
SIM1YIL123W TMA19P35691 167 aaKnown RBP10.2□□□□□ -0.78
SIM1YIL123W SHE2P36068 246 aaKnown RBP RIP-Chip data10.2□□□□□ -0.78not detected
SIM1YIL123W MRPL16P38064 232 aa10.2□□□□□ -0.78
SIM1YIL123W SHR5P41912 237 aa10.2□□□□□ -0.78
SIM1YIL123W SPG5P42933 373 aa10.2□□□□□ -0.78
SIM1YIL123W SFH5P47008 294 aa10.2□□□□□ -0.78
SIM1YIL123W PMT5P52867 743 aa10.2□□□□□ -0.78
SIM1YIL123W NRM1P53718 249 aa10.2□□□□□ -0.78
SIM1YIL123W PAL1Q05518 499 aaKnown RBP10.2□□□□□ -0.78
SIM1YIL123W COQ10Q08058 207 aa10.2□□□□□ -0.78
SIM1YIL123W ENB1Q08299 606 aa10.2□□□□□ -0.78
SIM1YIL123W KIN28P06242 306 aa10.19□□□□□ -0.78
SIM1YIL123W COX9P07255 59 aa10.19□□□□□ -0.78
SIM1YIL123W DBF2P22204 572 aa10.19□□□□□ -0.78
SIM1YIL123W PUT3P25502 979 aaPredicted RBP10.19□□□□□ -0.78
SIM1YIL123W HOM6P31116 359 aaKnown RBP10.19□□□□□ -0.78
SIM1YIL123W MDH3P32419 343 aaKnown RBP RIP-Chip data10.19□□□□□ -0.78not detected
SIM1YIL123W ANR2P36090 516 aaPredicted RBP10.19□□□□□ -0.78
SIM1YIL123W ALG3P38179 458 aa10.19□□□□□ -0.78
SIM1YIL123W MTC4P38335 694 aaKnown RBP10.19□□□□□ -0.78
SIM1YIL123W VBA2P38358 474 aaKnown RBP10.19□□□□□ -0.78
SIM1YIL123W PHO90P39535 881 aa10.19□□□□□ -0.78
SIM1YIL123W YKE4P40544 346 aa10.19□□□□□ -0.78
SIM1YIL123W PMT6P42934 759 aa10.19□□□□□ -0.78
SIM1YIL123W PAM16P42949 149 aa10.19□□□□□ -0.78
SIM1YIL123W OGG1P53397 376 aaPredicted RBP10.19□□□□□ -0.78
SIM1YIL123W RSM28Q03430 361 aa10.19□□□□□ -0.78
SIM1YIL123W EKI1Q03764 534 aa10.19□□□□□ -0.78
SIM1YIL123W HLR1Q04429 423 aa10.19□□□□□ -0.78
SIM1YIL123W MRPL1Q04599 285 aa10.19□□□□□ -0.78
SIM1YIL123W PAR32Q12515 295 aaKnown RBP10.19□□□□□ -0.78
SIM1YIL123W CYT1P07143 309 aa10.18□□□□□ -0.78
SIM1YIL123W HOM3P10869 527 aa10.18□□□□□ -0.78
SIM1YIL123W HIS7P33734 552 aaKnown RBP10.18□□□□□ -0.78
SIM1YIL123W CHK1P38147 527 aa10.18□□□□□ -0.78
SIM1YIL123W MLH1P38920 769 aa10.18□□□□□ -0.78
SIM1YIL123W VOA1P53262 265 aa10.18□□□□□ -0.78
SIM1YIL123W ERV29P53337 310 aa10.18□□□□□ -0.78
SIM1YIL123W PLB2Q03674 706 aa10.18□□□□□ -0.78
SIM1YIL123W YMR252CQ04814 134 aa10.18□□□□□ -0.78
SIM1YIL123W TPO3Q06451 622 aa10.18□□□□□ -0.78
SIM1YIL123W YPR196WQ06595 470 aa10.18□□□□□ -0.78
SIM1YIL123W YLR125WQ12138 136 aa10.18□□□□□ -0.78
SIM1YIL123W RLM1Q12224 676 aa10.18□□□□□ -0.78
SIM1YIL123W FAS1P07149 2051 aaKnown RBP10.18□□□□□ -0.78
SIM1YIL123W CYR1P08678 2026 aaKnown RBP10.17□□□□□ -0.78
SIM1YIL123W CYC1P00044 109 aaPredicted RBP10.17□□□□□ -0.78
SIM1YIL123W HOP09932 586 aa10.17□□□□□ -0.78
SIM1YIL123W MRP1P10662 321 aaKnown RBP10.17□□□□□ -0.78
SIM1YIL123W STE12P13574 688 aa10.17□□□□□ -0.78
SIM1YIL123W PTH1P38876 190 aaKnown RBP10.17□□□□□ -0.78
SIM1YIL123W FET3P38993 636 aa10.17□□□□□ -0.78
SIM1YIL123W RPE1P46969 238 aa10.17□□□□□ -0.78
SIM1YIL123W LCL3P53153 274 aa10.17□□□□□ -0.78
SIM1YIL123W YPR109WQ06104 294 aa10.17□□□□□ -0.78
SIM1YIL123W PHO92Q06390 306 aa10.17□□□□□ -0.78
SIM1YIL123W AIM6Q07716 390 aa10.17□□□□□ -0.78
SIM1YIL123W YOL073CQ08232 322 aa10.17□□□□□ -0.78
SIM1YIL123W RDR1Q08904 546 aa10.17□□□□□ -0.78
SIM1YIL123W YOR283WQ12040 230 aaKnown RBP10.17□□□□□ -0.78
SIM1YIL123W TAD3Q9URQ3 322 aa10.17□□□□□ -0.78
SIM1YIL123W HIS3P06633 220 aa10.16□□□□□ -0.78
SIM1YIL123W ARF1P11076 181 aaKnown RBP10.16□□□□□ -0.78
SIM1YIL123W NCP1P16603 691 aaKnown RBP10.16□□□□□ -0.78
SIM1YIL123W CWH43P25618 953 aa10.16□□□□□ -0.78
SIM1YIL123W EMP70P32802 667 aa10.16□□□□□ -0.78
SIM1YIL123W YHR210CP38893 341 aa10.16□□□□□ -0.78
SIM1YIL123W YNL208WP40159 199 aaKnown RBP10.16□□□□□ -0.78
SIM1YIL123W SNO3P43544 222 aa10.16□□□□□ -0.78
SIM1YIL123W YFR054CP43622 192 aa10.16□□□□□ -0.78
SIM1YIL123W YJR115WP47152 169 aa10.16□□□□□ -0.78
SIM1YIL123W NUP116Q02630 1113 aa10.16□□□□□ -0.78
SIM1YIL123W UTP21Q06078 939 aaPredicted RBP10.16□□□□□ -0.78
SIM1YIL123W HRT1Q08273 121 aa10.16□□□□□ -0.78
SIM1YIL123W TIR4Q12218 487 aaPredicted RBP10.16□□□□□ -0.78
SIM1YIL123W SCM3Q12334 223 aa10.16□□□□□ -0.78
SIM1YIL123W YOS9Q99220 542 aa10.16□□□□□ -0.78
SIM1YIL123W GCN4P03069 281 aa10.16□□□□□ -0.78
SIM1YIL123W PHO4P07270 312 aaKnown RBP10.16□□□□□ -0.78
SIM1YIL123W BOS1P25385 244 aa10.16□□□□□ -0.78
SIM1YIL123W PAU2P32612 120 aa10.16□□□□□ -0.78
SIM1YIL123W PAD1P33751 242 aaKnown RBP RIP-Chip data10.16□□□□□ -0.78not detected
SIM1YIL123W MTH1P35198 433 aa10.16□□□□□ -0.78
SIM1YIL123W YJL193WP39542 402 aa10.16□□□□□ -0.78
SIM1YIL123W ASK10P48361 1146 aa10.16□□□□□ -0.78
SIM1YIL123W LSM7P53905 115 aaKnown RBP10.16□□□□□ -0.78
SIM1YIL123W RRP9Q06506 573 aaKnown RBP10.16□□□□□ -0.78
SIM1YIL123W ATG41Q12048 136 aa10.16□□□□□ -0.78
SIM1YIL123W BTS1Q12051 335 aa10.16□□□□□ -0.78
SIM1YIL123W HSP42Q12329 375 aa10.16□□□□□ -0.78
SIM1YIL123W COX1P00401 534 aa10.15□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms