RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C YDL109CQ12103 647 aa6.97□□□□□ -1.29
SNP1YIL061C HSP42Q12329 375 aa6.97□□□□□ -1.29
SNP1YIL061C SCM3Q12334 223 aa6.97□□□□□ -1.29
SNP1YIL061C YPR1Q12458 312 aa6.97□□□□□ -1.29
SNP1YIL061C SET6Q12529 373 aa6.97□□□□□ -1.29
SNP1YIL061C YLR099W-AQ3E798 87 aa6.97□□□□□ -1.29
SNP1YIL061C GPM1P00950 247 aaKnown RBP6.96□□□□□ -1.3
SNP1YIL061C COX9P07255 59 aa6.96□□□□□ -1.3
SNP1YIL061C FAA1P30624 700 aaKnown RBP6.96□□□□□ -1.3
SNP1YIL061C PRE2P30656 287 aaKnown RBP6.96□□□□□ -1.3
SNP1YIL061C HIS7P33734 552 aaKnown RBP6.96□□□□□ -1.3
SNP1YIL061C SHE2P36068 246 aaKnown RBP RIP-Chip data6.96□□□□□ -1.3not detected
SNP1YIL061C VPS52P39904 641 aa6.96□□□□□ -1.3
SNP1YIL061C YIL067CP40514 678 aa6.96□□□□□ -1.3
SNP1YIL061C HXT9P40885 567 aa6.96□□□□□ -1.3
SNP1YIL061C RPE1P46969 238 aa6.96□□□□□ -1.3
SNP1YIL061C ORM1P53224 222 aa6.96□□□□□ -1.3
SNP1YIL061C YGR067CP53243 804 aa6.96□□□□□ -1.3
SNP1YIL061C YGR266WP53326 701 aa6.96□□□□□ -1.3
SNP1YIL061C MPA43P53583 542 aaPredicted RBP6.96□□□□□ -1.3
SNP1YIL061C HXT11P54862 567 aa6.96□□□□□ -1.3
SNP1YIL061C MRPL13Q02204 264 aa6.96□□□□□ -1.3
SNP1YIL061C NUP116Q02630 1113 aa6.96□□□□□ -1.3
SNP1YIL061C CYK3Q07533 885 aa6.96□□□□□ -1.3
SNP1YIL061C YOR283WQ12040 230 aaKnown RBP6.96□□□□□ -1.3
SNP1YIL061C REX3Q12090 404 aa6.96□□□□□ -1.3
SNP1YIL061C KIN28P06242 306 aa6.95□□□□□ -1.3
SNP1YIL061C HIS3P06633 220 aa6.95□□□□□ -1.3
SNP1YIL061C CYT1P07143 309 aa6.95□□□□□ -1.3
SNP1YIL061C PHO4P07270 312 aaKnown RBP6.95□□□□□ -1.3
SNP1YIL061C YSF3P0C074 85 aaPredicted RBP6.95□□□□□ -1.3
SNP1YIL061C MRP1P10662 321 aaKnown RBP6.95□□□□□ -1.3
SNP1YIL061C PET54P10834 293 aa6.95□□□□□ -1.3
SNP1YIL061C STE12P13574 688 aa6.95□□□□□ -1.3
SNP1YIL061C STF2P16965 84 aa6.95□□□□□ -1.3
SNP1YIL061C PUT3P25502 979 aaPredicted RBP6.95□□□□□ -1.3
SNP1YIL061C MKK2P32491 506 aa6.95□□□□□ -1.3
SNP1YIL061C PAU2P32612 120 aa6.95□□□□□ -1.3
SNP1YIL061C PPQ1P32945 549 aa6.95□□□□□ -1.3
SNP1YIL061C MSN4P33749 630 aa6.95□□□□□ -1.3
SNP1YIL061C TAF14P35189 244 aa6.95□□□□□ -1.3
SNP1YIL061C GPX1P36014 167 aa6.95□□□□□ -1.3
SNP1YIL061C MRPL16P38064 232 aa6.95□□□□□ -1.3
SNP1YIL061C OCA5P38738 679 aa6.95□□□□□ -1.3
SNP1YIL061C NSG1P38837 291 aa6.95□□□□□ -1.3
SNP1YIL061C MLH1P38920 769 aa6.95□□□□□ -1.3
SNP1YIL061C MSS4P38994 779 aa6.95□□□□□ -1.3
SNP1YIL061C FAA3P39002 694 aa6.95□□□□□ -1.3
SNP1YIL061C BOL3P39724 118 aa6.95□□□□□ -1.3
SNP1YIL061C SDP1P40479 209 aa6.95□□□□□ -1.3
SNP1YIL061C POP1P41812 875 aa6.95□□□□□ -1.3
SNP1YIL061C LEM3P42838 414 aa6.95□□□□□ -1.3
SNP1YIL061C BNA6P43619 295 aa6.95□□□□□ -1.3
SNP1YIL061C ALK1P43633 760 aaKnown RBP6.95□□□□□ -1.3
SNP1YIL061C SFH5P47008 294 aa6.95□□□□□ -1.3
SNP1YIL061C YJR141WP47172 347 aaPredicted RBP6.95□□□□□ -1.3
SNP1YIL061C SEH1P53011 349 aaKnown RBP6.95□□□□□ -1.3
SNP1YIL061C MPP6P53725 186 aaPredicted RBP6.95□□□□□ -1.3
SNP1YIL061C LSM7P53905 115 aaKnown RBP6.95□□□□□ -1.3
SNP1YIL061C YLR460CP54007 376 aa6.95□□□□□ -1.3
SNP1YIL061C YMR252CQ04814 134 aa6.95□□□□□ -1.3
SNP1YIL061C ATG41Q12048 136 aa6.95□□□□□ -1.3
SNP1YIL061C MCP1Q12106 302 aa6.95□□□□□ -1.3
SNP1YIL061C FLP1P03870 423 aa6.94□□□□□ -1.3
SNP1YIL061C NUP1P20676 1076 aa6.94□□□□□ -1.3
SNP1YIL061C MDH3P32419 343 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
SNP1YIL061C HYM1P32464 399 aa6.94□□□□□ -1.3
SNP1YIL061C AAD14P42884 376 aa6.94□□□□□ -1.3
SNP1YIL061C DIE2P50076 525 aa6.94□□□□□ -1.3
SNP1YIL061C SAM37P50110 327 aa6.94□□□□□ -1.3
SNP1YIL061C RHO5P53879 331 aaKnown RBP6.94□□□□□ -1.3
SNP1YIL061C MRPS16Q02608 121 aa6.94□□□□□ -1.3
SNP1YIL061C MRPL1Q04599 285 aa6.94□□□□□ -1.3
SNP1YIL061C PAL1Q05518 499 aaKnown RBP6.94□□□□□ -1.3
SNP1YIL061C YPR109WQ06104 294 aa6.94□□□□□ -1.3
SNP1YIL061C COQ10Q08058 207 aa6.94□□□□□ -1.3
SNP1YIL061C ENV7Q12003 364 aa6.94□□□□□ -1.3
SNP1YIL061C TIR4Q12218 487 aaPredicted RBP6.94□□□□□ -1.3
SNP1YIL061C GCN4P03069 281 aa6.93□□□□□ -1.3
SNP1YIL061C RPS18AP0CX55 146 aaKnown RBP6.93□□□□□ -1.3
SNP1YIL061C RPS18BP0CX56 146 aaPredicted RBP6.93□□□□□ -1.3
SNP1YIL061C DAT1P13483 248 aaKnown RBP6.93□□□□□ -1.3
SNP1YIL061C YCR102CP25608 368 aa6.93□□□□□ -1.3
SNP1YIL061C KRE6P32486 720 aa6.93□□□□□ -1.3
SNP1YIL061C SLC1P33333 303 aa6.93□□□□□ -1.3
SNP1YIL061C UTP30P36144 274 aaKnown RBP6.93□□□□□ -1.3
SNP1YIL061C CHK1P38147 527 aa6.93□□□□□ -1.3
SNP1YIL061C ALG3P38179 458 aa6.93□□□□□ -1.3
SNP1YIL061C YBR242WP38331 238 aa6.93□□□□□ -1.3
SNP1YIL061C VBA2P38358 474 aaKnown RBP6.93□□□□□ -1.3
SNP1YIL061C PHO90P39535 881 aa6.93□□□□□ -1.3
SNP1YIL061C HPA3P39979 161 aa6.93□□□□□ -1.3
SNP1YIL061C SIT1P39980 628 aa6.93□□□□□ -1.3
SNP1YIL061C SHR5P41912 237 aa6.93□□□□□ -1.3
SNP1YIL061C TRM9P49957 279 aa6.93□□□□□ -1.3
SNP1YIL061C DOC1P53068 250 aa6.93□□□□□ -1.3
SNP1YIL061C VOA1P53262 265 aa6.93□□□□□ -1.3
SNP1YIL061C OGG1P53397 376 aaPredicted RBP6.93□□□□□ -1.3
SNP1YIL061C EKI1Q03764 534 aa6.93□□□□□ -1.3
SNP1YIL061C TPP1Q03796 238 aa6.93□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms