RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTM1	YHR109W	TIS11	P47977	285 aa		3.12	□□□□□ -1.91
CTM1	YHR109W	NBP1	P52919	319 aa	Predicted RBP	3.12	□□□□□ -1.91
CTM1	YHR109W	VBA1	Q04301	562 aa		3.12	□□□□□ -1.91
CTM1	YHR109W	GRS2	Q06817	618 aa		3.12	□□□□□ -1.91
CTM1	YHR109W	CHD1	P32657	1468 aa		3.12	□□□□□ -1.91
CTM1	YHR109W	DAL82	P21705	255 aa		3.11	□□□□□ -1.91
CTM1	YHR109W	MIR1	P23641	311 aa	Known RBP	3.11	□□□□□ -1.91
CTM1	YHR109W	RRT12	P25381	491 aa		3.11	□□□□□ -1.91
CTM1	YHR109W	SDH3	P33421	198 aa		3.11	□□□□□ -1.91
CTM1	YHR109W	PTI1	P39927	425 aa	Predicted RBP	3.11	□□□□□ -1.91
CTM1	YHR109W	MSS2	P40990	351 aa		3.11	□□□□□ -1.91
CTM1	YHR109W	CDH1	P53197	566 aa		3.11	□□□□□ -1.91
CTM1	YHR109W	ALG11	P53954	548 aa	Known RBP	3.11	□□□□□ -1.91
CTM1	YHR109W	SDO1	Q07953	250 aa	Known RBP	3.11	□□□□□ -1.91
CTM1	YHR109W	ATP16	Q12165	160 aa		3.11	□□□□□ -1.91
CTM1	YHR109W	MRP1	P10662	321 aa	Known RBP	3.1	□□□□□ -1.91
CTM1	YHR109W	RPB4	P20433	221 aa	Predicted RBP	3.1	□□□□□ -1.91
CTM1	YHR109W	MRPL6	P32904	214 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	KTI12	P34253	313 aa	Known RBP	3.1	□□□□□ -1.91
CTM1	YHR109W	MCH2	P36032	473 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	RFS1	P38234	210 aa	Known RBP	3.1	□□□□□ -1.91
CTM1	YHR109W	YIA6	P40556	373 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	GCN20	P43535	752 aa	Known RBP	3.1	□□□□□ -1.91
CTM1	YHR109W	AIM23	P47015	356 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	BIR1	P47134	954 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	ELP3	Q02908	557 aa	Known RBP	3.1	□□□□□ -1.91
CTM1	YHR109W	YMR027W	Q04371	470 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	FSH2	Q05015	223 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	PAM18	Q07914	168 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	PPT2	Q12036	173 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	IZH2	Q12442	317 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	NAG1	Q8TGN9	163 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	CDC36	P06100	191 aa	Predicted RBP	3.1	□□□□□ -1.91
CTM1	YHR109W	CTA1	P15202	515 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	POF1	P25576	258 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	INO2	P26798	304 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	SRB4	P32569	687 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	PRS4	P38063	326 aa	Predicted RBP	3.1	□□□□□ -1.91
CTM1	YHR109W	LDB7	P38210	180 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	SOP4	P39543	234 aa	Predicted RBP	3.1	□□□□□ -1.91
CTM1	YHR109W	AIM10	P39965	576 aa	Known RBP	3.1	□□□□□ -1.91
CTM1	YHR109W	PAN6	P40459	309 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	MOB2	P43563	287 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	YFR057W	P43625	151 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	SWC4	P53201	476 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	VHT1	P53241	593 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	TPC1	P53257	314 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	YNL040W	P53960	456 aa	Predicted RBP	3.1	□□□□□ -1.91
CTM1	YHR109W	ADH6	Q04894	360 aa	Known RBP	3.1	□□□□□ -1.91
CTM1	YHR109W	ADF1	Q2V2Q1	113 aa		3.1	□□□□□ -1.91
CTM1	YHR109W	TDH2	P00358	332 aa	Known RBP	3.09	□□□□□ -1.91
CTM1	YHR109W	HIS1	P00498	297 aa	Known RBP	3.09	□□□□□ -1.91
CTM1	YHR109W	TFS1	P14306	219 aa		3.09	□□□□□ -1.91
CTM1	YHR109W	PDC2	P32896	925 aa		3.09	□□□□□ -1.91
CTM1	YHR109W	CYM1	P32898	989 aa		3.09	□□□□□ -1.91
CTM1	YHR109W	SPT4	P32914	102 aa	Predicted RBP	3.09	□□□□□ -1.91
CTM1	YHR109W	ANR2	P36090	516 aa	Predicted RBP	3.09	□□□□□ -1.91
CTM1	YHR109W	YBR062C	P38239	180 aa		3.09	□□□□□ -1.91
CTM1	YHR109W	ATG18	P43601	500 aa		3.09	□□□□□ -1.91
CTM1	YHR109W	UBC13	P52490	153 aa		3.09	□□□□□ -1.91
CTM1	YHR109W	YMR317W	Q04893	1140 aa		3.09	□□□□□ -1.91
CTM1	YHR109W	MRX9	Q07349	420 aa	Known RBP	3.09	□□□□□ -1.91
CTM1	YHR109W	MSH5	Q12175	901 aa		3.09	□□□□□ -1.91
CTM1	YHR109W	RRP42	Q12277	265 aa	Predicted RBP	3.09	□□□□□ -1.91
CTM1	YHR109W	ERV2	Q12284	196 aa		3.09	□□□□□ -1.91
CTM1	YHR109W	YBR298C-A	Q8TGK4	73 aa		3.09	□□□□□ -1.91
CTM1	YHR109W	NAM9	P27929	486 aa		3.08	□□□□□ -1.92
CTM1	YHR109W	IES6	P32617	166 aa		3.08	□□□□□ -1.92
CTM1	YHR109W	YBL059W	P34224	193 aa		3.08	□□□□□ -1.92
CTM1	YHR109W	WSC4	P38739	605 aa		3.08	□□□□□ -1.92
CTM1	YHR109W	ALD5	P40047	520 aa	Known RBP	3.08	□□□□□ -1.92
CTM1	YHR109W	OTU1	P43558	301 aa		3.08	□□□□□ -1.92
CTM1	YHR109W	PEX31	P53203	462 aa		3.08	□□□□□ -1.92
CTM1	YHR109W	CLD1	P53264	445 aa		3.08	□□□□□ -1.92
CTM1	YHR109W	SCS7	Q03529	384 aa		3.08	□□□□□ -1.92
CTM1	YHR109W	HRI1	Q05905	244 aa	Known RBP	3.08	□□□□□ -1.92
CTM1	YHR109W	NDD1	Q08887	554 aa		3.08	□□□□□ -1.92
CTM1	YHR109W	YOR376W	Q08900	122 aa		3.08	□□□□□ -1.92
CTM1	YHR109W	HMS1	Q12398	434 aa		3.08	□□□□□ -1.92
CTM1	YHR109W	YPR064W	Q12492	139 aa		3.08	□□□□□ -1.92
CTM1	YHR109W	MHP1	P43638	1398 aa		3.08	□□□□□ -1.92
CTM1	YHR109W	PHO2	P07269	559 aa		3.07	□□□□□ -1.92
CTM1	YHR109W	VPS3	P23643	1011 aa		3.07	□□□□□ -1.92
CTM1	YHR109W	NUP2	P32499	720 aa		3.07	□□□□□ -1.92
CTM1	YHR109W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
CTM1	YHR109W	MRPL10	P36520	322 aa		3.07	□□□□□ -1.92
CTM1	YHR109W	PFS1	P38872	237 aa		3.07	□□□□□ -1.92
CTM1	YHR109W	HIT1	P46973	164 aa		3.07	□□□□□ -1.92
CTM1	YHR109W	TAD2	P47058	250 aa		3.07	□□□□□ -1.92
CTM1	YHR109W	VAC7	P53950	1165 aa		3.07	□□□□□ -1.92
CTM1	YHR109W	SLT2	Q00772	484 aa		3.07	□□□□□ -1.92
CTM1	YHR109W	HHF1	P02309	103 aa	Known RBP	3.07	□□□□□ -1.92
CTM1	YHR109W	TCP1	P12612	559 aa	Known RBP	3.07	□□□□□ -1.92
CTM1	YHR109W	REV1	P12689	985 aa		3.07	□□□□□ -1.92
CTM1	YHR109W	MRPL20	P22354	195 aa	Predicted RBP	3.07	□□□□□ -1.92
CTM1	YHR109W	URA10	P30402	227 aa		3.07	□□□□□ -1.92
CTM1	YHR109W	FMP46	P36141	133 aa	Known RBP	3.07	□□□□□ -1.92
CTM1	YHR109W	ATG12	P38316	186 aa		3.07	□□□□□ -1.92
CTM1	YHR109W	BAT1	P38891	393 aa	Known RBP	3.07	□□□□□ -1.92
CTM1	YHR109W	CHL4	P38907	458 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 195 ms