RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W YPK2P18961 677 aa2.31□□□□□ -2.04
TRA1YHR099W VID24P38263 362 aa2.31□□□□□ -2.04
TRA1YHR099W YGP1P38616 354 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W INM1P38710 295 aa2.31□□□□□ -2.04
TRA1YHR099W CRG1P38892 291 aaRIP-Chip data2.31□□□□□ -2.04not detected
TRA1YHR099W SMX2P40204 77 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W DIP5P53388 608 aa2.31□□□□□ -2.04
TRA1YHR099W CBK1P53894 756 aa2.31□□□□□ -2.04
TRA1YHR099W ECM9Q02202 377 aa2.31□□□□□ -2.04
TRA1YHR099W YMR181CQ03231 154 aa2.31□□□□□ -2.04
TRA1YHR099W COX17Q12287 69 aa2.31□□□□□ -2.04
TRA1YHR099W ATG40Q99325 256 aa2.31□□□□□ -2.04
TRA1YHR099W RPL31BP0C2H9 113 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W RPL20AP0CX23 172 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W RPL20BP0CX24 172 aaPredicted RBP2.31□□□□□ -2.04
TRA1YHR099W NUD1P32336 851 aa2.31□□□□□ -2.04
TRA1YHR099W RAD24P32641 659 aa2.31□□□□□ -2.04
TRA1YHR099W SLM4P38247 162 aa2.31□□□□□ -2.04
TRA1YHR099W EFM4P40516 257 aa2.31□□□□□ -2.04
TRA1YHR099W OYE3P41816 400 aaPredicted RBP2.31□□□□□ -2.04
TRA1YHR099W BUD32P53323 261 aa2.31□□□□□ -2.04
TRA1YHR099W ODC1Q03028 310 aa2.31□□□□□ -2.04
TRA1YHR099W BLS1Q06071 122 aa2.31□□□□□ -2.04
TRA1YHR099W YLR053CQ12026 108 aa2.31□□□□□ -2.04
TRA1YHR099W SPO12P17123 173 aa2.31□□□□□ -2.04
TRA1YHR099W ARG1P22768 420 aa2.31□□□□□ -2.04
TRA1YHR099W SRB5P32585 307 aa2.31□□□□□ -2.04
TRA1YHR099W PET130P47065 347 aa2.31□□□□□ -2.04
TRA1YHR099W YNR014WP53719 212 aa2.31□□□□□ -2.04
TRA1YHR099W TRM112P53738 135 aaPredicted RBP2.31□□□□□ -2.04
TRA1YHR099W CTL1Q03220 320 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W RNH202Q05635 350 aa2.31□□□□□ -2.04
TRA1YHR099W MRX9Q07349 420 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W YOR338WQ99326 363 aa2.31□□□□□ -2.04
TRA1YHR099W TY1B-JR2P47100 1755 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W TY1B-ER2Q03619 1755 aa2.31□□□□□ -2.04
TRA1YHR099W TY1B-MR1Q04214 1755 aa2.31□□□□□ -2.04
TRA1YHR099W TY1B-MR2Q04670 1755 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W TY1B-LR1Q12088 1755 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W TY1B-NL1Q12112 1755 aa2.31□□□□□ -2.04
TRA1YHR099W TY1B-GR1Q12141 1755 aa2.31□□□□□ -2.04
TRA1YHR099W TY1B-BLQ12490 1755 aa2.31□□□□□ -2.04
TRA1YHR099W RAD52P06778 471 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W PHO3P24031 467 aa2.31□□□□□ -2.04
TRA1YHR099W PTP1P25044 335 aa2.31□□□□□ -2.04
TRA1YHR099W CAP1P28495 268 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W NEM1P38757 446 aa2.31□□□□□ -2.04
TRA1YHR099W PIG2P40187 538 aa2.31□□□□□ -2.04
TRA1YHR099W SNP1Q00916 300 aaPredicted RBP2.31□□□□□ -2.04
TRA1YHR099W MHR1Q06630 226 aa2.31□□□□□ -2.04
TRA1YHR099W PAM18Q07914 168 aa2.31□□□□□ -2.04
TRA1YHR099W YOR105WQ08504 108 aa2.31□□□□□ -2.04
TRA1YHR099W FDH1Q08911 376 aa2.31□□□□□ -2.04
TRA1YHR099W YDL199CQ12407 687 aa2.31□□□□□ -2.04
TRA1YHR099W ISA2Q12425 185 aa2.31□□□□□ -2.04
TRA1YHR099W POM34Q12445 299 aa2.31□□□□□ -2.04
TRA1YHR099W CYC7P00045 113 aa2.31□□□□□ -2.04
TRA1YHR099W SCH9P11792 824 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W KAR4P25583 335 aa2.31□□□□□ -2.04
TRA1YHR099W PPZ2P33329 710 aa2.31□□□□□ -2.04
TRA1YHR099W YBR292CP38357 123 aa2.31□□□□□ -2.04
TRA1YHR099W YJR096WP47137 282 aa2.31□□□□□ -2.04
TRA1YHR099W MTC3P53077 123 aa2.31□□□□□ -2.04
TRA1YHR099W GPI15P53961 229 aa2.31□□□□□ -2.04
TRA1YHR099W YML096WQ04489 525 aa2.31□□□□□ -2.04
TRA1YHR099W YOR192C-CQ3E736 78 aa2.31□□□□□ -2.04
TRA1YHR099W YLR278CQ05854 1341 aa2.31□□□□□ -2.04
TRA1YHR099W ALG7P07286 448 aa2.31□□□□□ -2.04
TRA1YHR099W NAR1P23503 491 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W CNE1P27825 502 aa2.31□□□□□ -2.04
TRA1YHR099W PRP18P33411 251 aaPredicted RBP2.31□□□□□ -2.04
TRA1YHR099W JEN1P36035 616 aa2.31□□□□□ -2.04
TRA1YHR099W LYS20P48570 428 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W CTR1P49573 406 aa2.31□□□□□ -2.04
TRA1YHR099W ART5P53244 586 aaKnown RBP2.31□□□□□ -2.04
TRA1YHR099W AI3P03877 415 aa2.3□□□□□ -2.04
TRA1YHR099W ATP10P18496 279 aa2.3□□□□□ -2.04
TRA1YHR099W BAS1P22035 811 aa2.3□□□□□ -2.04
TRA1YHR099W YBR220CP38318 560 aa2.3□□□□□ -2.04
TRA1YHR099W YIL060WP40519 144 aa2.3□□□□□ -2.04
TRA1YHR099W SWF1Q04629 336 aa2.3□□□□□ -2.04
TRA1YHR099W THI73Q07904 523 aa2.3□□□□□ -2.04
TRA1YHR099W INO4P13902 151 aa2.3□□□□□ -2.04
TRA1YHR099W SAM35P14693 329 aa2.3□□□□□ -2.04
TRA1YHR099W PUT4P15380 627 aa2.3□□□□□ -2.04
TRA1YHR099W RPB5P20434 215 aa2.3□□□□□ -2.04
TRA1YHR099W SFP1P32432 683 aa2.3□□□□□ -2.04
TRA1YHR099W CSG2P35206 410 aa2.3□□□□□ -2.04
TRA1YHR099W EDS1P38073 919 aa2.3□□□□□ -2.04
TRA1YHR099W SWC5P38326 303 aa2.3□□□□□ -2.04
TRA1YHR099W SVP26P38869 228 aa2.3□□□□□ -2.04
TRA1YHR099W QDR1P40475 563 aa2.3□□□□□ -2.04
TRA1YHR099W IBA57P47158 497 aa2.3□□□□□ -2.04
TRA1YHR099W CCC1P47818 322 aa2.3□□□□□ -2.04
TRA1YHR099W DUG3P53871 357 aa2.3□□□□□ -2.04
TRA1YHR099W DIA1P54005 336 aa2.3□□□□□ -2.04
TRA1YHR099W LYS21Q12122 440 aaKnown RBP2.3□□□□□ -2.04
TRA1YHR099W PKH2Q12236 1081 aaKnown RBP2.3□□□□□ -2.04
TRA1YHR099W NDJ1Q12366 352 aa2.3□□□□□ -2.04
TRA1YHR099W FUR4P05316 633 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 1680.2 ms