RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	ARC18	Q05933	178 aa	Known RBP	3.01	□□□□□ -1.93
CCM1	YGR150C	MHR1	Q06630	226 aa		3.01	□□□□□ -1.93
CCM1	YGR150C	SSK1	Q07084	712 aa		3.01	□□□□□ -1.93
CCM1	YGR150C	MUM3	Q08750	479 aa		3.01	□□□□□ -1.93
CCM1	YGR150C	RPL7B	Q12213	244 aa	Known RBP	3.01	□□□□□ -1.93
CCM1	YGR150C	YOR114W	Q12219	294 aa		3.01	□□□□□ -1.93
CCM1	YGR150C	NCA2	Q12374	616 aa		3.01	□□□□□ -1.93
CCM1	YGR150C	MEX67	Q99257	599 aa	Known RBP	3.01	□□□□□ -1.93
CCM1	YGR150C	IZH4	Q99393	312 aa		3.01	□□□□□ -1.93
CCM1	YGR150C	RPL28	P02406	149 aa	Known RBP	3	□□□□□ -1.93
CCM1	YGR150C	ASP3-2	P0CX77	362 aa		3	□□□□□ -1.93
CCM1	YGR150C	ASP3-3	P0CX78	362 aa		3	□□□□□ -1.93
CCM1	YGR150C	ASP3-4	P0CX79	362 aa		3	□□□□□ -1.93
CCM1	YGR150C	ASP3-1	P0CZ17	362 aa		3	□□□□□ -1.93
CCM1	YGR150C	ERG4	P25340	473 aa		3	□□□□□ -1.93
CCM1	YGR150C	HOM6	P31116	359 aa	Known RBP	3	□□□□□ -1.93
CCM1	YGR150C	PRE6	P40303	254 aa	Known RBP	3	□□□□□ -1.93
CCM1	YGR150C	GDS1	P41913	522 aa		3	□□□□□ -1.93
CCM1	YGR150C	CIN2	P46670	268 aa		3	□□□□□ -1.93
CCM1	YGR150C	ALG13	P53178	202 aa		3	□□□□□ -1.93
CCM1	YGR150C	SPC24	Q04477	213 aa		3	□□□□□ -1.93
CCM1	YGR150C	CTR3	Q06686	241 aa		3	□□□□□ -1.93
CCM1	YGR150C	NOT5	Q12514	560 aa	Predicted RBP	3	□□□□□ -1.93
CCM1	YGR150C	CDC10	P25342	322 aa	Known RBP	3	□□□□□ -1.93
CCM1	YGR150C	YCR007C	P25354	239 aa		3	□□□□□ -1.93
CCM1	YGR150C	QRI5	P32344	111 aa		3	□□□□□ -1.93
CCM1	YGR150C	RAD5	P32849	1169 aa	Predicted RBP	3	□□□□□ -1.93
CCM1	YGR150C	YCR041W	P37265	110 aa		3	□□□□□ -1.93
CCM1	YGR150C	GPX2	P38143	162 aa		3	□□□□□ -1.93
CCM1	YGR150C	SFH5	P47008	294 aa		3	□□□□□ -1.93
CCM1	YGR150C	YJR012C	P47087	207 aa		3	□□□□□ -1.93
CCM1	YGR150C	PRP24	P49960	444 aa	Known RBP	3	□□□□□ -1.93
CCM1	YGR150C	IMD3	P50095	523 aa	Known RBP	3	□□□□□ -1.93
CCM1	YGR150C	USE1	P53146	245 aa		3	□□□□□ -1.93
CCM1	YGR150C	MAL13	P53338	473 aa		3	□□□□□ -1.93
CCM1	YGR150C	PRM6	Q04705	352 aa		3	□□□□□ -1.93
CCM1	YGR150C	MRPL51	Q06090	140 aa	Predicted RBP	3	□□□□□ -1.93
CCM1	YGR150C	DIC1	Q06143	298 aa		3	□□□□□ -1.93
CCM1	YGR150C	DXO1	Q06349	442 aa		3	□□□□□ -1.93
CCM1	YGR150C	YDL218W	Q07629	317 aa		3	□□□□□ -1.93
CCM1	YGR150C	YCT1	Q12235	531 aa		3	□□□□□ -1.93
CCM1	YGR150C	ALG7	P07286	448 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	SSC1	P0CS90	654 aa	Known RBP	2.99	□□□□□ -1.93
CCM1	YGR150C	MTF1	P14908	341 aa	Known RBP	2.99	□□□□□ -1.93
CCM1	YGR150C	SPO11	P23179	398 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	YEF1	P32622	495 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	NTF2	P33331	125 aa	Known RBP	2.99	□□□□□ -1.93
CCM1	YGR150C	LOS1	P33418	1100 aa	Predicted RBP	2.99	□□□□□ -1.93
CCM1	YGR150C	DRE2	P36152	348 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	SHG1	P38337	142 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	VMA22	P38784	181 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	YPT35	P38815	214 aa	Known RBP	2.99	□□□□□ -1.93
CCM1	YGR150C	MET30	P39014	640 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	DHH1	P39517	506 aa	Known RBP	2.99	□□□□□ -1.93
CCM1	YGR150C	BDH2	P39713	417 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	VRG4	P40107	337 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	VMA10	P48836	114 aa	Known RBP	2.99	□□□□□ -1.93
CCM1	YGR150C	ORC5	P50874	479 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	YGL235W	P53071	178 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	CDH1	P53197	566 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	BET5	Q03630	159 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	MFG1	Q07684	458 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	YPL199C	Q08954	240 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	SME1	Q12330	94 aa	Predicted RBP	2.99	□□□□□ -1.93
CCM1	YGR150C	SAL1	D6W196	494 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	TPI1	P00942	248 aa	Known RBP	2.99	□□□□□ -1.93
CCM1	YGR150C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
CCM1	YGR150C	TFS1	P14306	219 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	RPL16B	P26785	198 aa	Known RBP	2.99	□□□□□ -1.93
CCM1	YGR150C	MUD1	P32605	298 aa	Known RBP	2.99	□□□□□ -1.93
CCM1	YGR150C	DER1	P38307	211 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	COG3	P40094	801 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	YIA6	P40556	373 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	YJR056C	P47115	236 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	SBH2	P52871	88 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	YGL204C	P53089	101 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	NQM1	P53228	333 aa	Predicted RBP	2.99	□□□□□ -1.93
CCM1	YGR150C	YNR048W	P53740	393 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	YNL040W	P53960	456 aa	Predicted RBP	2.99	□□□□□ -1.93
CCM1	YGR150C	STP1	Q00947	519 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	LGE1	Q02796	332 aa	Known RBP	2.99	□□□□□ -1.93
CCM1	YGR150C	ECI1	Q05871	280 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	TMA10	Q06177	86 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	YNG1	Q08465	219 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	YPL150W	Q12152	901 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	YDL009C	Q12210	107 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	EMP46	Q12396	444 aa		2.99	□□□□□ -1.93
CCM1	YGR150C	RPL20A	P0CX23	172 aa	Known RBP	2.98	□□□□□ -1.93
CCM1	YGR150C	RPL20B	P0CX24	172 aa	Predicted RBP	2.98	□□□□□ -1.93
CCM1	YGR150C	MCH2	P36032	473 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	APD1	P38281	316 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	GEP4	P38812	185 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	PAC2	P39937	518 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	MRM2	P53123	320 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	ASI3	P53983	676 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	NUP100	Q02629	959 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	SNX41	Q04053	625 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	SFH1	Q06168	426 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	YLR012C	Q07927	99 aa		2.98	□□□□□ -1.93
CCM1	YGR150C	POM152	P39685	1337 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms