RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W ATG38Q05789 226 aaKnown RBP4.37□□□□□ -1.71
UBC6YER100W RIF2Q06208 395 aa4.37□□□□□ -1.71
UBC6YER100W MRX9Q07349 420 aaKnown RBP4.37□□□□□ -1.71
UBC6YER100W TMS1Q12116 473 aa4.37□□□□□ -1.71
UBC6YER100W SFM1Q12314 213 aa4.37□□□□□ -1.71
UBC6YER100W YER078W-AQ3E7A2 54 aa4.37□□□□□ -1.71
UBC6YER100W QCR6P00127 147 aa4.36□□□□□ -1.71
UBC6YER100W PRB1P09232 635 aa4.36□□□□□ -1.71
UBC6YER100W CBS2P14905 389 aa4.36□□□□□ -1.71
UBC6YER100W RPS5P26783 225 aaKnown RBP4.36□□□□□ -1.71
UBC6YER100W RPL16BP26785 198 aaKnown RBP4.36□□□□□ -1.71
UBC6YER100W CSE1P33307 960 aa4.36□□□□□ -1.71
UBC6YER100W PTI1P39927 425 aaPredicted RBP4.36□□□□□ -1.71
UBC6YER100W YJR085CP47131 105 aaKnown RBP4.36□□□□□ -1.71
UBC6YER100W SHY1P53266 389 aa4.36□□□□□ -1.71
UBC6YER100W GTO3Q04806 366 aa4.36□□□□□ -1.71
UBC6YER100W FAR10Q06001 478 aa4.36□□□□□ -1.71
UBC6YER100W TSR1Q07381 788 aaKnown RBP4.36□□□□□ -1.71
UBC6YER100W RSA1Q08932 381 aa4.36□□□□□ -1.71
UBC6YER100W YOR029WQ12243 111 aa4.36□□□□□ -1.71
UBC6YER100W ERV2Q12284 196 aa4.36□□□□□ -1.71
UBC6YER100W JID1Q12350 301 aa4.36□□□□□ -1.71
UBC6YER100W YBL111CQ3E7Y5 667 aa4.36□□□□□ -1.71
UBC6YER100W HIS1P00498 297 aaKnown RBP4.35□□□□□ -1.71
UBC6YER100W MRP1P10662 321 aaKnown RBP4.35□□□□□ -1.71
UBC6YER100W LDS1P31379 325 aa4.35□□□□□ -1.71
UBC6YER100W DEP1P31385 405 aa4.35□□□□□ -1.71
UBC6YER100W MRPL6P32904 214 aa4.35□□□□□ -1.71
UBC6YER100W AIM10P39965 576 aaKnown RBP4.35□□□□□ -1.71
UBC6YER100W REE1P40893 198 aa4.35□□□□□ -1.71
UBC6YER100W MOB2P43563 287 aa4.35□□□□□ -1.71
UBC6YER100W TAD2P47058 250 aa4.35□□□□□ -1.71
UBC6YER100W RPN8Q08723 338 aaKnown RBP4.35□□□□□ -1.71
UBC6YER100W TAF10Q12030 206 aa4.35□□□□□ -1.71
UBC6YER100W MSH5Q12175 901 aa4.35□□□□□ -1.71
UBC6YER100W ICT1Q12385 394 aa4.35□□□□□ -1.71
UBC6YER100W YBR298C-AQ8TGK4 73 aa4.35□□□□□ -1.71
UBC6YER100W CFT1Q06632 1357 aaKnown RBP4.35□□□□□ -1.71
UBC6YER100W HHF1P02309 103 aaKnown RBP4.34□□□□□ -1.71
UBC6YER100W ARG80P07249 177 aa4.34□□□□□ -1.71
UBC6YER100W KTI12P34253 313 aaKnown RBP4.34□□□□□ -1.71
UBC6YER100W MRX3P38172 270 aa4.34□□□□□ -1.71
UBC6YER100W YIL067CP40514 678 aa4.34□□□□□ -1.71
UBC6YER100W YIA6P40556 373 aa4.34□□□□□ -1.71
UBC6YER100W AIM23P47015 356 aa4.34□□□□□ -1.71
UBC6YER100W CPD1P53314 239 aa4.34□□□□□ -1.71
UBC6YER100W MRPS17Q03246 237 aaPredicted RBP4.34□□□□□ -1.71
UBC6YER100W YHC1Q05900 231 aaKnown RBP4.34□□□□□ -1.71
UBC6YER100W YOR387CQ08910 206 aa4.34□□□□□ -1.71
UBC6YER100W CSM4Q08955 156 aa4.34□□□□□ -1.71
UBC6YER100W POM33Q12164 279 aa4.34□□□□□ -1.71
UBC6YER100W YPR064WQ12492 139 aa4.34□□□□□ -1.71
UBC6YER100W NAM2P11325 894 aa4.33□□□□□ -1.72
UBC6YER100W TFS1P14306 219 aa4.33□□□□□ -1.72
UBC6YER100W RPO26P20435 155 aa4.33□□□□□ -1.72
UBC6YER100W ARO2P28777 376 aaKnown RBP4.33□□□□□ -1.72
UBC6YER100W PRS2P38620 318 aaKnown RBP4.33□□□□□ -1.72
UBC6YER100W SIP3P38717 1229 aa4.33□□□□□ -1.72
UBC6YER100W YPT32P51996 222 aaKnown RBP4.33□□□□□ -1.72
UBC6YER100W VHT1P53241 593 aa4.33□□□□□ -1.72
UBC6YER100W TRM44Q02648 567 aaKnown RBP4.33□□□□□ -1.72
UBC6YER100W OST6Q03723 332 aa4.33□□□□□ -1.72
UBC6YER100W MYO5Q04439 1219 aaKnown RBP4.33□□□□□ -1.72
UBC6YER100W PBA1Q05778 276 aa4.33□□□□□ -1.72
UBC6YER100W YLR446WQ06204 433 aa4.33□□□□□ -1.72
UBC6YER100W MFG1Q07684 458 aa4.33□□□□□ -1.72
UBC6YER100W FDH1Q08911 376 aa4.33□□□□□ -1.72
UBC6YER100W ATP16Q12165 160 aa4.33□□□□□ -1.72
UBC6YER100W RRP42Q12277 265 aaPredicted RBP4.33□□□□□ -1.72
UBC6YER100W MCT1Q12283 360 aa4.33□□□□□ -1.72
UBC6YER100W RPS8AP0CX39 200 aaKnown RBP4.32□□□□□ -1.72
UBC6YER100W RPS8BP0CX40 200 aaKnown RBP4.32□□□□□ -1.72
UBC6YER100W SPT15P13393 240 aaKnown RBP4.32□□□□□ -1.72
UBC6YER100W MRPL25P23369 157 aa4.32□□□□□ -1.72
UBC6YER100W IFM1P25038 676 aa4.32□□□□□ -1.72
UBC6YER100W GIT1P25346 518 aa4.32□□□□□ -1.72
UBC6YER100W PMT2P31382 759 aa4.32□□□□□ -1.72
UBC6YER100W CAB3P36076 571 aa4.32□□□□□ -1.72
UBC6YER100W YPC1P38298 316 aa4.32□□□□□ -1.72
UBC6YER100W RCK1P38622 512 aa4.32□□□□□ -1.72
UBC6YER100W CHL4P38907 458 aa4.32□□□□□ -1.72
UBC6YER100W YFR057WP43625 151 aa4.32□□□□□ -1.72
UBC6YER100W BNS1P50084 137 aa4.32□□□□□ -1.72
UBC6YER100W NOP13P53883 403 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
UBC6YER100W GIM3P53900 129 aa4.32□□□□□ -1.72
UBC6YER100W VAC7P53950 1165 aa4.32□□□□□ -1.72
UBC6YER100W FSH2Q05015 223 aa4.32□□□□□ -1.72
UBC6YER100W GAS2Q06135 555 aa4.32□□□□□ -1.72
UBC6YER100W ERD1P16151 362 aa4.31□□□□□ -1.72
UBC6YER100W RPL24BP24000 155 aaKnown RBP4.31□□□□□ -1.72
UBC6YER100W CPR3P25719 182 aa4.31□□□□□ -1.72
UBC6YER100W LDB7P38210 180 aa4.31□□□□□ -1.72
UBC6YER100W NDT80P38830 627 aa4.31□□□□□ -1.72
UBC6YER100W PTH1P38876 190 aaKnown RBP4.31□□□□□ -1.72
UBC6YER100W YAT2P40017 923 aa4.31□□□□□ -1.72
UBC6YER100W ALD5P40047 520 aaKnown RBP4.31□□□□□ -1.72
UBC6YER100W YER186CP40101 306 aa4.31□□□□□ -1.72
UBC6YER100W YNL208WP40159 199 aaKnown RBP4.31□□□□□ -1.72
UBC6YER100W ATG18P43601 500 aa4.31□□□□□ -1.72
UBC6YER100W ASG7P46993 209 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms