RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C SEI1Q06058 285 aa5.21□□□□□ -1.58
SEC20YDR498C PHO92Q06390 306 aa5.21□□□□□ -1.58
SEC20YDR498C YPR127WQ06494 345 aa5.21□□□□□ -1.58
SEC20YDR498C RRP9Q06506 573 aaKnown RBP5.21□□□□□ -1.58
SEC20YDR498C YPR172WQ06608 200 aa5.21□□□□□ -1.58
SEC20YDR498C SYO1Q07395 620 aa5.21□□□□□ -1.58
SEC20YDR498C NBA1Q08229 501 aaKnown RBP5.21□□□□□ -1.58
SEC20YDR498C FMP40Q08968 688 aaPredicted RBP5.21□□□□□ -1.58
SEC20YDR498C ATG41Q12048 136 aa5.21□□□□□ -1.58
SEC20YDR498C RTK1Q12100 620 aaPredicted RBP5.21□□□□□ -1.58
SEC20YDR498C TIR4Q12218 487 aaPredicted RBP5.21□□□□□ -1.58
SEC20YDR498C YOL114CQ12322 202 aa5.21□□□□□ -1.58
SEC20YDR498C PCL9Q12477 304 aa5.21□□□□□ -1.58
SEC20YDR498C PSF1Q12488 208 aa5.21□□□□□ -1.58
SEC20YDR498C PHO80P20052 293 aa5.2□□□□□ -1.58
SEC20YDR498C HSP30P25619 332 aa5.2□□□□□ -1.58
SEC20YDR498C HSP150P32478 413 aa5.2□□□□□ -1.58
SEC20YDR498C CLG1P35190 452 aa5.2□□□□□ -1.58
SEC20YDR498C RSM22P36056 628 aa5.2□□□□□ -1.58
SEC20YDR498C BET3P36149 193 aa5.2□□□□□ -1.58
SEC20YDR498C DTR1P38125 572 aa5.2□□□□□ -1.58
SEC20YDR498C MAL32P38158 584 aa5.2□□□□□ -1.58
SEC20YDR498C YBR137WP38276 179 aa5.2□□□□□ -1.58
SEC20YDR498C MBA1P38300 278 aa5.2□□□□□ -1.58
SEC20YDR498C RPS20P38701 121 aaKnown RBP5.2□□□□□ -1.58
SEC20YDR498C YHR210CP38893 341 aa5.2□□□□□ -1.58
SEC20YDR498C TRM9P49957 279 aa5.2□□□□□ -1.58
SEC20YDR498C SPT20P50875 604 aa5.2□□□□□ -1.58
SEC20YDR498C YGL101WP53144 215 aa5.2□□□□□ -1.58
SEC20YDR498C ERV29P53337 310 aa5.2□□□□□ -1.58
SEC20YDR498C MAL12P53341 584 aa5.2□□□□□ -1.58
SEC20YDR498C DML1Q03652 475 aa5.2□□□□□ -1.58
SEC20YDR498C URC2Q04411 772 aa5.2□□□□□ -1.58
SEC20YDR498C PAL1Q05518 499 aaKnown RBP5.2□□□□□ -1.58
SEC20YDR498C BUR2Q05949 395 aa5.2□□□□□ -1.58
SEC20YDR498C SNT309Q06091 175 aaPredicted RBP5.2□□□□□ -1.58
SEC20YDR498C NMA1Q06178 401 aaKnown RBP5.2□□□□□ -1.58
SEC20YDR498C YOL073CQ08232 322 aa5.2□□□□□ -1.58
SEC20YDR498C AVO1Q08236 1176 aa5.2□□□□□ -1.58
SEC20YDR498C HRT1Q08273 121 aa5.2□□□□□ -1.58
SEC20YDR498C RDR1Q08904 546 aa5.2□□□□□ -1.58
SEC20YDR498C GUP2Q08929 609 aa5.2□□□□□ -1.58
SEC20YDR498C SKM1Q12469 655 aa5.2□□□□□ -1.58
SEC20YDR498C CDC31P06704 161 aaKnown RBP5.19□□□□□ -1.58
SEC20YDR498C GRX2P17695 143 aaKnown RBP5.19□□□□□ -1.58
SEC20YDR498C RPB8P20436 146 aa5.19□□□□□ -1.58
SEC20YDR498C YCR102CP25608 368 aa5.19□□□□□ -1.58
SEC20YDR498C PUB1P32588 453 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
SEC20YDR498C ECT1P33412 323 aa5.19□□□□□ -1.58
SEC20YDR498C MTC2P34246 357 aa5.19□□□□□ -1.58
SEC20YDR498C VPS51P36116 164 aa5.19□□□□□ -1.58
SEC20YDR498C NSG1P38837 291 aa5.19□□□□□ -1.58
SEC20YDR498C SIT1P39980 628 aa5.19□□□□□ -1.58
SEC20YDR498C QDR1P40475 563 aa5.19□□□□□ -1.58
SEC20YDR498C HXT9P40885 567 aa5.19□□□□□ -1.58
SEC20YDR498C PMT6P42934 759 aa5.19□□□□□ -1.58
SEC20YDR498C IRC18P47056 224 aa5.19□□□□□ -1.58
SEC20YDR498C DIE2P50076 525 aa5.19□□□□□ -1.58
SEC20YDR498C COS10P52924 374 aa5.19□□□□□ -1.58
SEC20YDR498C SEH1P53011 349 aaKnown RBP5.19□□□□□ -1.58
SEC20YDR498C PAU12P53343 120 aa5.19□□□□□ -1.58
SEC20YDR498C HXT11P54862 567 aa5.19□□□□□ -1.58
SEC20YDR498C YMR210WQ03649 449 aa5.19□□□□□ -1.58
SEC20YDR498C SNO4Q04902 237 aa5.19□□□□□ -1.58
SEC20YDR498C MFB1Q04922 465 aa5.19□□□□□ -1.58
SEC20YDR498C DIC1Q06143 298 aa5.19□□□□□ -1.58
SEC20YDR498C TPO3Q06451 622 aa5.19□□□□□ -1.58
SEC20YDR498C YEH1Q07804 573 aa5.19□□□□□ -1.58
SEC20YDR498C NOP12Q08208 459 aaKnown RBP5.19□□□□□ -1.58
SEC20YDR498C HSP33Q08914 237 aaKnown RBP5.19□□□□□ -1.58
SEC20YDR498C HSP32Q08992 237 aa5.19□□□□□ -1.58
SEC20YDR498C BTS1Q12051 335 aa5.19□□□□□ -1.58
SEC20YDR498C YOR214CQ12282 236 aa5.19□□□□□ -1.58
SEC20YDR498C YDR061WQ12298 539 aa5.19□□□□□ -1.58
SEC20YDR498C FRE7Q12333 620 aa5.19□□□□□ -1.58
SEC20YDR498C FRE6Q12473 712 aa5.19□□□□□ -1.58
SEC20YDR498C YLR099W-AQ3E798 87 aa5.19□□□□□ -1.58
SEC20YDR498C YBL113CQ7M4S9 792 aa5.19□□□□□ -1.58
SEC20YDR498C CYC1P00044 109 aaPredicted RBP5.18□□□□□ -1.58
SEC20YDR498C CDC9P04819 755 aa5.18□□□□□ -1.58
SEC20YDR498C YSF3P0C074 85 aaPredicted RBP5.18□□□□□ -1.58
SEC20YDR498C RPS18AP0CX55 146 aaKnown RBP5.18□□□□□ -1.58
SEC20YDR498C RPS18BP0CX56 146 aaPredicted RBP5.18□□□□□ -1.58
SEC20YDR498C EXG1P23776 448 aaKnown RBP5.18□□□□□ -1.58
SEC20YDR498C ATG22P25568 528 aa5.18□□□□□ -1.58
SEC20YDR498C PBN1P25580 416 aa5.18□□□□□ -1.58
SEC20YDR498C MDH3P32419 343 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
SEC20YDR498C PPQ1P32945 549 aa5.18□□□□□ -1.58
SEC20YDR498C ANR2P36090 516 aaPredicted RBP5.18□□□□□ -1.58
SEC20YDR498C MRPL15P36523 253 aa5.18□□□□□ -1.58
SEC20YDR498C PAU24P38155 120 aa5.18□□□□□ -1.58
SEC20YDR498C HIS6P40545 261 aa5.18□□□□□ -1.58
SEC20YDR498C FET5P43561 622 aa5.18□□□□□ -1.58
SEC20YDR498C LCL3P53153 274 aa5.18□□□□□ -1.58
SEC20YDR498C SAY1P53324 424 aa5.18□□□□□ -1.58
SEC20YDR498C MPP6P53725 186 aaPredicted RBP5.18□□□□□ -1.58
SEC20YDR498C MNT4P53745 580 aa5.18□□□□□ -1.58
SEC20YDR498C MRPL13Q02204 264 aa5.18□□□□□ -1.58
SEC20YDR498C NOG1Q02892 647 aaKnown RBP5.18□□□□□ -1.58
SEC20YDR498C ORM2Q06144 216 aa5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms