RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene SLD5, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD5YDR489W ECM34P38728 170 aa2.39□□□□□ -2.03
SLD5YDR489W PET8P38921 284 aa2.39□□□□□ -2.03
SLD5YDR489W VPS45P38932 577 aa2.39□□□□□ -2.03
SLD5YDR489W SOP4P39543 234 aaPredicted RBP2.39□□□□□ -2.03
SLD5YDR489W YFL012WP43580 148 aa2.39□□□□□ -2.03
SLD5YDR489W NRM1P53718 249 aa2.39□□□□□ -2.03
SLD5YDR489W ERV25P54837 211 aaKnown RBP2.39□□□□□ -2.03
SLD5YDR489W SPO19Q03029 223 aa2.39□□□□□ -2.03
SLD5YDR489W ECM11Q04110 302 aa2.39□□□□□ -2.03
SLD5YDR489W YMR111CQ04461 462 aaPredicted RBP2.39□□□□□ -2.03
SLD5YDR489W DIB1Q06819 143 aaPredicted RBP2.39□□□□□ -2.03
SLD5YDR489W YOL029CQ08187 201 aa2.39□□□□□ -2.03
SLD5YDR489W APC9Q12107 265 aa2.39□□□□□ -2.03
SLD5YDR489W DCP1Q12517 231 aaPredicted RBP2.39□□□□□ -2.03
SLD5YDR489W DFM1Q12743 341 aaKnown RBP2.39□□□□□ -2.03
SLD5YDR489W STE2D6VTK4 431 aa2.38□□□□□ -2.03
SLD5YDR489W RAD23P32628 398 aaKnown RBP2.38□□□□□ -2.03
SLD5YDR489W MRPL40P36534 297 aa2.38□□□□□ -2.03
SLD5YDR489W FRM2P37261 193 aa2.38□□□□□ -2.03
SLD5YDR489W UFE1P41834 346 aa2.38□□□□□ -2.03
SLD5YDR489W MPP10P47083 593 aaKnown RBP2.38□□□□□ -2.03
SLD5YDR489W COQ5P49017 307 aa2.38□□□□□ -2.03
SLD5YDR489W FLC3P53121 802 aa2.38□□□□□ -2.03
SLD5YDR489W VOA1P53262 265 aa2.38□□□□□ -2.03
SLD5YDR489W ARP5P53946 755 aa2.38□□□□□ -2.03
SLD5YDR489W YPL080CQ02826 108 aa2.38□□□□□ -2.03
SLD5YDR489W IRC4Q03036 179 aa2.38□□□□□ -2.03
SLD5YDR489W INP2Q03824 705 aa2.38□□□□□ -2.03
SLD5YDR489W SNX41Q04053 625 aa2.38□□□□□ -2.03
SLD5YDR489W APC4Q04601 652 aa2.38□□□□□ -2.03
SLD5YDR489W PFK27Q12471 397 aaPredicted RBP2.38□□□□□ -2.03
SLD5YDR489W AUS1Q08409 1394 aa2.37□□□□□ -2.03
SLD5YDR489W HPR1P17629 752 aaKnown RBP2.37□□□□□ -2.03
SLD5YDR489W COX10P21592 462 aa2.37□□□□□ -2.03
SLD5YDR489W MCH2P36032 473 aa2.37□□□□□ -2.03
SLD5YDR489W DSE1P40077 573 aa2.37□□□□□ -2.03
SLD5YDR489W SLM1P40485 686 aa2.37□□□□□ -2.03
SLD5YDR489W UBC13P52490 153 aa2.37□□□□□ -2.03
SLD5YDR489W ECM19Q06011 112 aa2.37□□□□□ -2.03
SLD5YDR489W IES4Q08561 116 aa2.37□□□□□ -2.03
SLD5YDR489W SLF1Q12034 447 aaKnown RBP2.37□□□□□ -2.03
SLD5YDR489W YPR1Q12458 312 aa2.37□□□□□ -2.03
SLD5YDR489W SAR1P20606 190 aaKnown RBP2.36□□□□□ -2.03
SLD5YDR489W RPB9P27999 122 aa2.36□□□□□ -2.03
SLD5YDR489W ZRT1P32804 376 aa2.36□□□□□ -2.03
SLD5YDR489W GPX1P36014 167 aa2.36□□□□□ -2.03
SLD5YDR489W RFT1P38206 574 aaPredicted RBP2.36□□□□□ -2.03
SLD5YDR489W YPC1P38298 316 aa2.36□□□□□ -2.03
SLD5YDR489W CTM1P38818 585 aa2.36□□□□□ -2.03
SLD5YDR489W PCL7P40186 285 aa2.36□□□□□ -2.03
SLD5YDR489W GDS1P41913 522 aa2.36□□□□□ -2.03
SLD5YDR489W COX16P47081 118 aa2.36□□□□□ -2.03
SLD5YDR489W YNR066CP53752 436 aa2.36□□□□□ -2.03
SLD5YDR489W ERV41Q04651 352 aa2.36□□□□□ -2.03
SLD5YDR489W YLR446WQ06204 433 aa2.36□□□□□ -2.03
SLD5YDR489W SAM4Q08985 325 aaKnown RBP2.36□□□□□ -2.03
SLD5YDR489W YPL245WQ12179 454 aaKnown RBP2.36□□□□□ -2.03
SLD5YDR489W TRM10Q12400 293 aa2.36□□□□□ -2.03
SLD5YDR489W ATP6P00854 259 aa2.35□□□□□ -2.03
SLD5YDR489W RPL31AP0C2H8 113 aaKnown RBP2.35□□□□□ -2.03
SLD5YDR489W FUS3P16892 353 aaKnown RBP2.35□□□□□ -2.03
SLD5YDR489W UGA1P17649 471 aa2.35□□□□□ -2.03
SLD5YDR489W DAL80P26343 269 aa2.35□□□□□ -2.03
SLD5YDR489W RPC25P35718 212 aa2.35□□□□□ -2.03
SLD5YDR489W YBR062CP38239 180 aa2.35□□□□□ -2.03
SLD5YDR489W ACT1P60010 375 aaKnown RBP2.35□□□□□ -2.03
SLD5YDR489W INP1Q03694 420 aa2.35□□□□□ -2.03
SLD5YDR489W YMR244WQ04018 355 aa2.35□□□□□ -2.03
SLD5YDR489W SIA1Q12212 622 aa2.35□□□□□ -2.03
SLD5YDR489W BI3Q9ZZW7 517 aa2.35□□□□□ -2.03
SLD5YDR489W TDH3P00359 332 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
SLD5YDR489W MRPL20P22354 195 aaPredicted RBP2.34□□□□□ -2.03
SLD5YDR489W GPI12P23797 304 aa2.34□□□□□ -2.03
SLD5YDR489W TPS2P31688 896 aaKnown RBP2.34□□□□□ -2.03
SLD5YDR489W VPH2P32341 215 aa2.34□□□□□ -2.03
SLD5YDR489W ZRT3P34240 503 aa2.34□□□□□ -2.03
SLD5YDR489W FRT2P39734 528 aa2.34□□□□□ -2.03
SLD5YDR489W MIC19P43594 170 aa2.34□□□□□ -2.03
SLD5YDR489W YGL185CP53100 379 aa2.34□□□□□ -2.03
SLD5YDR489W PNC1P53184 216 aaKnown RBP2.34□□□□□ -2.03
SLD5YDR489W FMP48P53233 369 aa2.34□□□□□ -2.03
SLD5YDR489W SMD1Q02260 146 aaPredicted RBP2.34□□□□□ -2.03
SLD5YDR489W SEC13Q04491 297 aaKnown RBP2.34□□□□□ -2.03
SLD5YDR489W PBP4Q07362 185 aaKnown RBP2.34□□□□□ -2.03
SLD5YDR489W UTP23Q12339 254 aaKnown RBP2.34□□□□□ -2.03
SLD5YDR489W FRS2P15625 503 aaKnown RBP2.33□□□□□ -2.04
SLD5YDR489W CKA2P19454 339 aa2.33□□□□□ -2.04
SLD5YDR489W MEK1P24719 497 aaPredicted RBP2.33□□□□□ -2.04
SLD5YDR489W IMP3P32899 183 aaPredicted RBP2.33□□□□□ -2.04
SLD5YDR489W RPS0AP32905 252 aaKnown RBP2.33□□□□□ -2.04
SLD5YDR489W TRR2P38816 342 aa2.33□□□□□ -2.04
SLD5YDR489W BDH1P39714 382 aa2.33□□□□□ -2.04
SLD5YDR489W YER184CP39961 794 aa2.33□□□□□ -2.04
SLD5YDR489W GTO1P48239 356 aa2.33□□□□□ -2.04
SLD5YDR489W SWC4P53201 476 aa2.33□□□□□ -2.04
SLD5YDR489W YGR266WP53326 701 aa2.33□□□□□ -2.04
SLD5YDR489W HST4P53688 370 aa2.33□□□□□ -2.04
SLD5YDR489W YNL260CP53846 198 aa2.33□□□□□ -2.04
SLD5YDR489W UTP15Q04305 513 aaKnown RBP2.33□□□□□ -2.04
SLD5YDR489W GMC1Q04399 608 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms