RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C NAS6P50086 228 aa3.87□□□□□ -1.79
RPB7YDR404C YGL260WP53056 76 aa3.87□□□□□ -1.79
RPB7YDR404C CWC25P53854 179 aaKnown RBP3.87□□□□□ -1.79
RPB7YDR404C PGA2P53903 129 aa3.87□□□□□ -1.79
RPB7YDR404C MTQ1P53944 314 aa3.87□□□□□ -1.79
RPB7YDR404C PRM6Q04705 352 aa3.87□□□□□ -1.79
RPB7YDR404C PBA1Q05778 276 aa3.87□□□□□ -1.79
RPB7YDR404C YOR387CQ08910 206 aa3.87□□□□□ -1.79
RPB7YDR404C YGK3Q12222 375 aaPredicted RBP3.87□□□□□ -1.79
RPB7YDR404C ERV2Q12284 196 aa3.87□□□□□ -1.79
RPB7YDR404C APC2Q12440 853 aa3.87□□□□□ -1.79
RPB7YDR404C PAA1Q12447 191 aaKnown RBP3.87□□□□□ -1.79
RPB7YDR404C MRPL23Q12487 163 aaPredicted RBP3.87□□□□□ -1.79
RPB7YDR404C MSF1P08425 469 aa3.86□□□□□ -1.79
RPB7YDR404C REV1P12689 985 aa3.86□□□□□ -1.79
RPB7YDR404C ECM8P38246 354 aa3.86□□□□□ -1.79
RPB7YDR404C IML3P38265 245 aa3.86□□□□□ -1.79
RPB7YDR404C RBG1P39729 369 aa3.86□□□□□ -1.79
RPB7YDR404C GCD14P46959 383 aaPredicted RBP3.86□□□□□ -1.79
RPB7YDR404C CTK3P46963 296 aaPredicted RBP3.86□□□□□ -1.79
RPB7YDR404C AIM24P47127 394 aa3.86□□□□□ -1.79
RPB7YDR404C TRF5P48561 642 aaKnown RBP3.86□□□□□ -1.79
RPB7YDR404C VOA1P53262 265 aa3.86□□□□□ -1.79
RPB7YDR404C NRM1P53718 249 aa3.86□□□□□ -1.79
RPB7YDR404C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
RPB7YDR404C BUR2Q05949 395 aa3.86□□□□□ -1.79
RPB7YDR404C RRG8Q06109 277 aa3.86□□□□□ -1.79
RPB7YDR404C VAC14Q06708 880 aa3.86□□□□□ -1.79
RPB7YDR404C DCP1Q12517 231 aaPredicted RBP3.86□□□□□ -1.79
RPB7YDR404C RPL43AP0CX25 92 aaKnown RBP3.85□□□□□ -1.79
RPB7YDR404C RPL43BP0CX26 92 aa3.85□□□□□ -1.79
RPB7YDR404C MSS116P15424 664 aaKnown RBP3.85□□□□□ -1.79
RPB7YDR404C POP5P28005 173 aa3.85□□□□□ -1.79
RPB7YDR404C COT1P32798 439 aa3.85□□□□□ -1.79
RPB7YDR404C CSE1P33307 960 aa3.85□□□□□ -1.79
RPB7YDR404C PAD1P33751 242 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
RPB7YDR404C PTH1P38876 190 aaKnown RBP3.85□□□□□ -1.79
RPB7YDR404C FET3P38993 636 aa3.85□□□□□ -1.79
RPB7YDR404C MAM33P40513 266 aa3.85□□□□□ -1.79
RPB7YDR404C YJR085CP47131 105 aaKnown RBP3.85□□□□□ -1.79
RPB7YDR404C VEL1P53058 206 aa3.85□□□□□ -1.79
RPB7YDR404C ELP3Q02908 557 aaKnown RBP3.85□□□□□ -1.79
RPB7YDR404C SPO19Q03029 223 aa3.85□□□□□ -1.79
RPB7YDR404C PCL9Q12477 304 aa3.85□□□□□ -1.79
RPB7YDR404C CAR2P07991 424 aaKnown RBP3.84□□□□□ -1.79
RPB7YDR404C TCP1P12612 559 aaKnown RBP3.84□□□□□ -1.79
RPB7YDR404C UGA1P17649 471 aa3.84□□□□□ -1.79
RPB7YDR404C SAR1P20606 190 aaKnown RBP3.84□□□□□ -1.79
RPB7YDR404C VPS3P23643 1011 aa3.84□□□□□ -1.79
RPB7YDR404C MKK1P32490 508 aa3.84□□□□□ -1.79
RPB7YDR404C RAD23P32628 398 aaKnown RBP3.84□□□□□ -1.79
RPB7YDR404C SPO23P33757 523 aa3.84□□□□□ -1.79
RPB7YDR404C CAB3P36076 571 aa3.84□□□□□ -1.79
RPB7YDR404C PFS1P38872 237 aa3.84□□□□□ -1.79
RPB7YDR404C YHR218WP38899 603 aa3.84□□□□□ -1.79
RPB7YDR404C TIF34P40217 347 aaKnown RBP3.84□□□□□ -1.79
RPB7YDR404C UTP25P40498 721 aaKnown RBP3.84□□□□□ -1.79
RPB7YDR404C CDC40P40968 455 aaPredicted RBP3.84□□□□□ -1.79
RPB7YDR404C HAC1P41546 238 aa3.84□□□□□ -1.79
RPB7YDR404C YCH1P42937 148 aa3.84□□□□□ -1.79
RPB7YDR404C YJR030CP47101 745 aa3.84□□□□□ -1.79
RPB7YDR404C RPN14P53196 417 aa3.84□□□□□ -1.79
RPB7YDR404C YGR168CP53293 376 aa3.84□□□□□ -1.79
RPB7YDR404C ALF1P53904 254 aa3.84□□□□□ -1.79
RPB7YDR404C CSM3Q04659 317 aa3.84□□□□□ -1.79
RPB7YDR404C YPR091CQ06833 770 aa3.84□□□□□ -1.79
RPB7YDR404C YPL278CQ08990 100 aa3.84□□□□□ -1.79
RPB7YDR404C FCY22Q12119 530 aa3.84□□□□□ -1.79
RPB7YDR404C HHF1P02309 103 aaKnown RBP3.83□□□□□ -1.8
RPB7YDR404C RAD3P06839 778 aa3.83□□□□□ -1.8
RPB7YDR404C MSI1P13712 422 aa3.83□□□□□ -1.8
RPB7YDR404C VMA5P31412 392 aaKnown RBP3.83□□□□□ -1.8
RPB7YDR404C YBL059WP34224 193 aa3.83□□□□□ -1.8
RPB7YDR404C YKL162CP36052 402 aa3.83□□□□□ -1.8
RPB7YDR404C AVT5P38176 459 aa3.83□□□□□ -1.8
RPB7YDR404C TAF6P53040 516 aa3.83□□□□□ -1.8
RPB7YDR404C YGL185CP53100 379 aa3.83□□□□□ -1.8
RPB7YDR404C TMS1Q12116 473 aa3.83□□□□□ -1.8
RPB7YDR404C HTZ1Q12692 134 aaKnown RBP3.83□□□□□ -1.8
RPB7YDR404C NAM2P11325 894 aa3.82□□□□□ -1.8
RPB7YDR404C SPT15P13393 240 aaKnown RBP3.82□□□□□ -1.8
RPB7YDR404C VPS1P21576 704 aaKnown RBP3.82□□□□□ -1.8
RPB7YDR404C MMS21P38632 267 aa3.82□□□□□ -1.8
RPB7YDR404C REE1P40893 198 aa3.82□□□□□ -1.8
RPB7YDR404C CIN2P46670 268 aa3.82□□□□□ -1.8
RPB7YDR404C LOH1P47055 219 aa3.82□□□□□ -1.8
RPB7YDR404C MST27P53176 234 aa3.82□□□□□ -1.8
RPB7YDR404C PXR1P53335 271 aaPredicted RBP3.82□□□□□ -1.8
RPB7YDR404C BOR1P53838 576 aa3.82□□□□□ -1.8
RPB7YDR404C RVB1Q03940 463 aaKnown RBP3.82□□□□□ -1.8
RPB7YDR404C YMR111CQ04461 462 aaPredicted RBP3.82□□□□□ -1.8
RPB7YDR404C ERV41Q04651 352 aa3.82□□□□□ -1.8
RPB7YDR404C RTN1Q04947 295 aaKnown RBP3.82□□□□□ -1.8
RPB7YDR404C HRI1Q05905 244 aaKnown RBP3.82□□□□□ -1.8
RPB7YDR404C NKP2Q06162 153 aa3.82□□□□□ -1.8
RPB7YDR404C YDL114WQ07530 308 aa3.82□□□□□ -1.8
RPB7YDR404C YDL199CQ12407 687 aa3.82□□□□□ -1.8
RPB7YDR404C YPR1Q12458 312 aa3.82□□□□□ -1.8
RPB7YDR404C DAL2P25335 343 aa3.81□□□□□ -1.8
RPB7YDR404C CHA1P25379 360 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms