RNA–Protein interactions for RNA: YDR185C

UPS3, Transcript of Mitochondrial protein of unknown function, yeast

Gene UPS3, Length 540 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPS3	YDR185C	ILV1	P00927	576 aa	Known RBP	4.74	□□□□□ -1.65
UPS3	YDR185C	CDC36	P06100	191 aa	Predicted RBP	4.74	□□□□□ -1.65
UPS3	YDR185C	ZIP1	P31111	875 aa		4.74	□□□□□ -1.65
UPS3	YDR185C	NAT2	P37293	288 aa		4.74	□□□□□ -1.65
UPS3	YDR185C	PRS4	P38063	326 aa	Predicted RBP	4.74	□□□□□ -1.65
UPS3	YDR185C	MTC4	P38335	694 aa	Known RBP	4.74	□□□□□ -1.65
UPS3	YDR185C	XBP1	P40489	647 aa		4.74	□□□□□ -1.65
UPS3	YDR185C	YIA6	P40556	373 aa		4.74	□□□□□ -1.65
UPS3	YDR185C	YNL320W	P42840	284 aa		4.74	□□□□□ -1.65
UPS3	YDR185C	YFL040W	P43562	540 aa		4.74	□□□□□ -1.65
UPS3	YDR185C	YPL077C	Q02831	240 aa		4.74	□□□□□ -1.65
UPS3	YDR185C	MRPS17	Q03246	237 aa	Predicted RBP	4.74	□□□□□ -1.65
UPS3	YDR185C	SDO1	Q07953	250 aa	Known RBP	4.74	□□□□□ -1.65
UPS3	YDR185C	RGT2	Q12300	763 aa		4.74	□□□□□ -1.65
UPS3	YDR185C	EAF3	Q12432	401 aa		4.74	□□□□□ -1.65
UPS3	YDR185C	YOS9	Q99220	542 aa		4.74	□□□□□ -1.65
UPS3	YDR185C	YBT1	P32386	1661 aa		4.73	□□□□□ -1.65
UPS3	YDR185C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.73	□□□□□ -1.65
UPS3	YDR185C	YFL068W	P0CX99	160 aa		4.73	□□□□□ -1.65
UPS3	YDR185C	YLL066W-A	P0CY00	160 aa		4.73	□□□□□ -1.65
UPS3	YDR185C	YLL067W-A	P0CY01	160 aa		4.73	□□□□□ -1.65
UPS3	YDR185C	MATALPHA1	P0CY06	175 aa		4.73	□□□□□ -1.65
UPS3	YDR185C	HMLALPHA1	P0CY07	175 aa		4.73	□□□□□ -1.65
UPS3	YDR185C	HEM15	P16622	393 aa		4.73	□□□□□ -1.65
UPS3	YDR185C	HPR1	P17629	752 aa	Known RBP	4.73	□□□□□ -1.65
UPS3	YDR185C	RPL16A	P26784	199 aa	Known RBP	4.73	□□□□□ -1.65
UPS3	YDR185C	YBP1	P38315	674 aa		4.73	□□□□□ -1.65
UPS3	YDR185C	YIL029C	P40538	142 aa		4.73	□□□□□ -1.65
UPS3	YDR185C	CTK3	P46963	296 aa	Predicted RBP	4.73	□□□□□ -1.65
UPS3	YDR185C	ALG11	P53954	548 aa	Known RBP	4.73	□□□□□ -1.65
UPS3	YDR185C	KTR6	P54070	446 aa		4.73	□□□□□ -1.65
UPS3	YDR185C	DIG1	Q03063	452 aa	Known RBP	4.73	□□□□□ -1.65
UPS3	YDR185C	YMR010W	Q03687	405 aa		4.73	□□□□□ -1.65
UPS3	YDR185C	OST6	Q03723	332 aa		4.73	□□□□□ -1.65
UPS3	YDR185C	BNA7	Q04066	261 aa		4.73	□□□□□ -1.65
UPS3	YDR185C	CLP1	Q08685	445 aa	Predicted RBP	4.73	□□□□□ -1.65
UPS3	YDR185C	DDC1	Q08949	612 aa		4.73	□□□□□ -1.65
UPS3	YDR185C	HTZ1	Q12692	134 aa	Known RBP	4.73	□□□□□ -1.65
UPS3	YDR185C	SSN2	P38931	1420 aa		4.72	□□□□□ -1.65
UPS3	YDR185C	PIS1	P06197	220 aa	Known RBP	4.72	□□□□□ -1.65
UPS3	YDR185C	MGM101	P32787	269 aa	Known RBP	4.72	□□□□□ -1.65
UPS3	YDR185C	AIM29	P36154	155 aa		4.72	□□□□□ -1.65
UPS3	YDR185C	MAL32	P38158	584 aa		4.72	□□□□□ -1.65
UPS3	YDR185C	ECM8	P38246	354 aa		4.72	□□□□□ -1.65
UPS3	YDR185C	LCB3	P47013	409 aa		4.72	□□□□□ -1.65
UPS3	YDR185C	RAD17	P48581	401 aa		4.72	□□□□□ -1.65
UPS3	YDR185C	MRM2	P53123	320 aa		4.72	□□□□□ -1.65
UPS3	YDR185C	MAL12	P53341	584 aa		4.72	□□□□□ -1.65
UPS3	YDR185C	GOR1	P53839	350 aa		4.72	□□□□□ -1.65
UPS3	YDR185C	FMP42	Q04991	504 aa		4.72	□□□□□ -1.65
UPS3	YDR185C	HCR1	Q05775	265 aa	Known RBP	4.72	□□□□□ -1.65
UPS3	YDR185C	THP3	Q12049	470 aa	Known RBP	4.72	□□□□□ -1.65
UPS3	YDR185C	MRS3	P10566	314 aa		4.71	□□□□□ -1.66
UPS3	YDR185C	RNA14	P25298	677 aa	Known RBP	4.71	□□□□□ -1.66
UPS3	YDR185C	PPA2	P28239	310 aa		4.71	□□□□□ -1.66
UPS3	YDR185C	AGA1	P32323	725 aa		4.71	□□□□□ -1.66
UPS3	YDR185C	NUP2	P32499	720 aa		4.71	□□□□□ -1.66
UPS3	YDR185C	RPC37	P36121	282 aa		4.71	□□□□□ -1.66
UPS3	YDR185C	LDB7	P38210	180 aa		4.71	□□□□□ -1.66
UPS3	YDR185C	YIL152W	P40455	235 aa		4.71	□□□□□ -1.66
UPS3	YDR185C	PCI8	P40512	444 aa		4.71	□□□□□ -1.66
UPS3	YDR185C	HIT1	P46973	164 aa		4.71	□□□□□ -1.66
UPS3	YDR185C	SWC4	P53201	476 aa		4.71	□□□□□ -1.66
UPS3	YDR185C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
UPS3	YDR185C	ENT5	Q03769	411 aa	Known RBP	4.71	□□□□□ -1.66
UPS3	YDR185C	YMR027W	Q04371	470 aa		4.71	□□□□□ -1.66
UPS3	YDR185C	RTN1	Q04947	295 aa	Known RBP	4.71	□□□□□ -1.66
UPS3	YDR185C	MSH5	Q12175	901 aa		4.71	□□□□□ -1.66
UPS3	YDR185C	AYT1	Q12226	474 aa		4.71	□□□□□ -1.66
UPS3	YDR185C	HIS1	P00498	297 aa	Known RBP	4.7	□□□□□ -1.66
UPS3	YDR185C	RPL31A	P0C2H8	113 aa	Known RBP	4.7	□□□□□ -1.66
UPS3	YDR185C	NHP6B	P11633	99 aa	Known RBP	4.7	□□□□□ -1.66
UPS3	YDR185C	PTP1	P25044	335 aa		4.7	□□□□□ -1.66
UPS3	YDR185C	RPL16B	P26785	198 aa	Known RBP	4.7	□□□□□ -1.66
UPS3	YDR185C	ASF2	P32448	525 aa	Predicted RBP	4.7	□□□□□ -1.66
UPS3	YDR185C	SPO23	P33757	523 aa		4.7	□□□□□ -1.66
UPS3	YDR185C	YKL063C	P35725	167 aa		4.7	□□□□□ -1.66
UPS3	YDR185C	ARC40	P38328	384 aa	Known RBP	4.7	□□□□□ -1.66
UPS3	YDR185C	YER034W	P40022	185 aa	Known RBP	4.7	□□□□□ -1.66
UPS3	YDR185C	DDI1	P40087	428 aa		4.7	□□□□□ -1.66
UPS3	YDR185C	WWM1	P43582	211 aa	Known RBP	4.7	□□□□□ -1.66
UPS3	YDR185C	NCA3	P46955	337 aa		4.7	□□□□□ -1.66
UPS3	YDR185C	PMT4	P46971	762 aa		4.7	□□□□□ -1.66
UPS3	YDR185C	NUP116	Q02630	1113 aa		4.7	□□□□□ -1.66
UPS3	YDR185C	SNX41	Q04053	625 aa		4.7	□□□□□ -1.66
UPS3	YDR185C	ERP1	Q05359	219 aa	Known RBP	4.7	□□□□□ -1.66
UPS3	YDR185C	JIP3	O13555	125 aa		4.69	□□□□□ -1.66
UPS3	YDR185C	RPL15A	P05748	204 aa	Known RBP	4.69	□□□□□ -1.66
UPS3	YDR185C	RHO1	P06780	209 aa	Known RBP	4.69	□□□□□ -1.66
UPS3	YDR185C	CPR1	P14832	162 aa	Known RBP	4.69	□□□□□ -1.66
UPS3	YDR185C	FUS3	P16892	353 aa	Known RBP	4.69	□□□□□ -1.66
UPS3	YDR185C	DAL81	P21657	970 aa		4.69	□□□□□ -1.66
UPS3	YDR185C	RPL24B	P24000	155 aa	Known RBP	4.69	□□□□□ -1.66
UPS3	YDR185C	AVT5	P38176	459 aa		4.69	□□□□□ -1.66
UPS3	YDR185C	PFS1	P38872	237 aa		4.69	□□□□□ -1.66
UPS3	YDR185C	MAM33	P40513	266 aa		4.69	□□□□□ -1.66
UPS3	YDR185C	RPR2	P40571	144 aa		4.69	□□□□□ -1.66
UPS3	YDR185C	TAD2	P47058	250 aa		4.69	□□□□□ -1.66
UPS3	YDR185C	MST27	P53176	234 aa		4.69	□□□□□ -1.66
UPS3	YDR185C	CPD1	P53314	239 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms