RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	CDC36	P06100	191 aa	Predicted RBP	4.87	□□□□□ -1.63
DBF4	YDR052C	SGA1	P08019	549 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	STE4	P18851	423 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	YUH1	P35127	236 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	ADD66	P36040	267 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	RCR1	P38212	213 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	FIG1	P38224	298 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	YHR035W	P38769	630 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	VPS52	P39904	641 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	GDI1	P39958	451 aa	Known RBP	4.87	□□□□□ -1.63
DBF4	YDR052C	SWM2	P40342	146 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	PMT6	P42934	759 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	GAT1	P43574	510 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	GWT1	P47026	490 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	GCV1	P48015	400 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	KXD1	P53158	218 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	FMP41	P53889	259 aa	Known RBP	4.87	□□□□□ -1.63
DBF4	YDR052C	EOS1	P53938	366 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	GPI15	P53961	229 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	CGI121	Q03705	181 aa	Known RBP	4.87	□□□□□ -1.63
DBF4	YDR052C	EKI1	Q03764	534 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	VBA1	Q04301	562 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	CSM3	Q04659	317 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	SPR28	Q04921	423 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	THI7	Q05998	598 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	CSI2	Q08054	341 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	AIM39	Q08223	395 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	TPO4	Q12256	659 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	AHA1	Q12449	350 aa	Known RBP	4.87	□□□□□ -1.63
DBF4	YDR052C	MHF2	Q3E829	80 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	YLR358C	O13565	187 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	UNG1	P12887	359 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	NUP1	P20676	1076 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	SDH2	P21801	266 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	VBA3	P25594	458 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	STP22	P25604	385 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	PER1	P25625	357 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	HOM6	P31116	359 aa	Known RBP	4.87	□□□□□ -1.63
DBF4	YDR052C	YEF1	P32622	495 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	PPG1	P32838	368 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	CLB6	P32943	380 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	DOA1	P36037	715 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	ALY1	P36117	915 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	YCR087C-A	P37263	153 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	FLR1	P38124	548 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	FAT1	P38225	669 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	MTC4	P38335	694 aa	Known RBP	4.87	□□□□□ -1.63
DBF4	YDR052C	YHR033W	P38690	423 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	LRP1	P38801	184 aa	Known RBP	4.87	□□□□□ -1.63
DBF4	YDR052C	RFC4	P40339	323 aa	Known RBP	4.87	□□□□□ -1.63
DBF4	YDR052C	YIL161W	P40449	235 aa	Known RBP	4.87	□□□□□ -1.63
DBF4	YDR052C	YIL152W	P40455	235 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	GDS1	P41913	522 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	MDM34	P53083	459 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	PRM8	P53174	237 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	YGR053C	P53234	283 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	COQ6	P53318	479 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	NRK1	P53915	240 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	YSA1	Q01976	231 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	UPS3	Q04006	179 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	YDR391C	Q04170	232 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	PEX30	Q06169	523 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	TUM1	Q08686	304 aa	Known RBP	4.87	□□□□□ -1.63
DBF4	YDR052C	WSC3	Q12215	556 aa		4.87	□□□□□ -1.63
DBF4	YDR052C	HKR1	P41809	1802 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	HAP3	P13434	144 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	SNF5	P18480	905 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	CDC42	P19073	191 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	AIM17	P23180	465 aa	Known RBP	4.86	□□□□□ -1.63
DBF4	YDR052C	YCK2	P23292	546 aa	Known RBP	4.86	□□□□□ -1.63
DBF4	YDR052C	PPH21	P23594	369 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	URA10	P30402	227 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	AFG1	P32317	509 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	YPC1	P38298	316 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	ALP1	P38971	573 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	GCV3	P39726	170 aa	Predicted RBP	4.86	□□□□□ -1.63
DBF4	YDR052C	SMB1	P40018	196 aa	Known RBP	4.86	□□□□□ -1.63
DBF4	YDR052C	LRO1	P40345	661 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	THI12	P42883	340 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	THI5	P43534	340 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	IRC7	P43623	340 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	NNF1	P47149	201 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	AVT4	P50944	713 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	SDT1	P53078	280 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	YGL101W	P53144	215 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	YGR250C	P53316	781 aa	Known RBP	4.86	□□□□□ -1.63
DBF4	YDR052C	DUS1	P53759	423 aa	Known RBP	4.86	□□□□□ -1.63
DBF4	YDR052C	VPS28	Q02767	242 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	DIG2	Q03373	323 aa	Known RBP	4.86	□□□□□ -1.63
DBF4	YDR052C	MSS11	Q03825	758 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	ATG39	Q06159	398 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	MRPL35	Q06678	367 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	BER1	Q06688	274 aa	Known RBP	4.86	□□□□□ -1.63
DBF4	YDR052C	MRX9	Q07349	420 aa	Known RBP	4.86	□□□□□ -1.63
DBF4	YDR052C	UPC2	Q12151	913 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	WTM1	Q12363	437 aa	Known RBP	4.86	□□□□□ -1.63
DBF4	YDR052C	SRF1	Q12516	437 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	COA6	Q3E846	104 aa		4.86	□□□□□ -1.63
DBF4	YDR052C	YEL009C-A	A0A023PZF2	135 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	COX5B	P00425	151 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms