RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	SSO2	P39926	295 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	YNL320W	P42840	284 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	IGD1	P43598	195 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	ADD37	Q03233	198 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	ABZ2	Q03266	374 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	YLR177W	Q06251	628 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	FRE8	Q12209	686 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	COX4	P04037	155 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	UTH1	P36135	365 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	SOL2	P37262	315 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	AIM20	P40451	204 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	AIM23	P47015	356 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	TSA2	Q04120	196 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	CSI1	Q04368	295 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	BUR2	Q05949	395 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	MDY2	Q12285	212 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	APC2	Q12440	853 aa		4.64	□□□□□ -1.67
SIR2	YDL042C	COS9	P36034	407 aa		4.63	□□□□□ -1.67
SIR2	YDL042C	RCK2	P38623	610 aa		4.63	□□□□□ -1.67
SIR2	YDL042C	MMS21	P38632	267 aa		4.63	□□□□□ -1.67
SIR2	YDL042C	LSG1	P53145	640 aa	Known RBP	4.63	□□□□□ -1.67
SIR2	YDL042C	YLR297W	Q05899	129 aa		4.63	□□□□□ -1.67
SIR2	YDL042C	FAS2	P19097	1887 aa	Known RBP	4.62	□□□□□ -1.67
SIR2	YDL042C	VPS63	O13549	108 aa		4.62	□□□□□ -1.67
SIR2	YDL042C	RPS14A	P06367	137 aa	Known RBP	4.62	□□□□□ -1.67
SIR2	YDL042C	UNG1	P12887	359 aa		4.62	□□□□□ -1.67
SIR2	YDL042C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SIR2	YDL042C	VMA5	P31412	392 aa	Known RBP	4.62	□□□□□ -1.67
SIR2	YDL042C	GPI18	P38211	433 aa		4.62	□□□□□ -1.67
SIR2	YDL042C	RPS14B	P39516	138 aa	Known RBP	4.62	□□□□□ -1.67
SIR2	YDL042C	SLT2	Q00772	484 aa		4.62	□□□□□ -1.67
SIR2	YDL042C	RPL18A	P0CX49	186 aa	Known RBP	4.61	□□□□□ -1.67
SIR2	YDL042C	RPL18B	P0CX50	186 aa	Known RBP	4.61	□□□□□ -1.67
SIR2	YDL042C	PET18	P25362	215 aa		4.61	□□□□□ -1.67
SIR2	YDL042C	END3	P39013	349 aa		4.61	□□□□□ -1.67
SIR2	YDL042C	RVB1	Q03940	463 aa	Known RBP	4.61	□□□□□ -1.67
SIR2	YDL042C	UBX2	Q04228	584 aa		4.61	□□□□□ -1.67
SIR2	YDL042C	TOM1	Q03280	3268 aa		4.61	□□□□□ -1.67
SIR2	YDL042C	FLO11	P08640	1367 aa		4.61	□□□□□ -1.67
SIR2	YDL042C	CBP2	P03874	630 aa	Predicted RBP	4.61	□□□□□ -1.67
SIR2	YDL042C	DCC1	P25559	380 aa		4.61	□□□□□ -1.67
SIR2	YDL042C	PCH2	P38126	564 aa		4.61	□□□□□ -1.67
SIR2	YDL042C	YBR241C	P38142	488 aa		4.61	□□□□□ -1.67
SIR2	YDL042C	BMT2	P38278	337 aa		4.61	□□□□□ -1.67
SIR2	YDL042C	SEH1	P53011	349 aa	Known RBP	4.61	□□□□□ -1.67
SIR2	YDL042C	TAF6	P53040	516 aa		4.61	□□□□□ -1.67
SIR2	YDL042C	CDH1	P53197	566 aa		4.61	□□□□□ -1.67
SIR2	YDL042C	SUR7	P54003	302 aa		4.61	□□□□□ -1.67
SIR2	YDL042C	CAB5	Q03941	241 aa		4.61	□□□□□ -1.67
SIR2	YDL042C	YPS1	P32329	569 aa		4.6	□□□□□ -1.67
SIR2	YDL042C	TOA1	P32773	286 aa		4.6	□□□□□ -1.67
SIR2	YDL042C	ALD5	P40047	520 aa	Known RBP	4.6	□□□□□ -1.67
SIR2	YDL042C	MOB2	P43563	287 aa		4.6	□□□□□ -1.67
SIR2	YDL042C	VHT1	P53241	593 aa		4.6	□□□□□ -1.67
SIR2	YDL042C	MRPS16	Q02608	121 aa		4.6	□□□□□ -1.67
SIR2	YDL042C	FOL3	Q12676	427 aa	Predicted RBP	4.6	□□□□□ -1.67
SIR2	YDL042C	DUR1,2	P32528	1835 aa	Known RBP	4.59	□□□□□ -1.67
SIR2	YDL042C	DAL5	P15365	543 aa		4.59	□□□□□ -1.67
SIR2	YDL042C	YGR168C	P53293	376 aa		4.59	□□□□□ -1.67
SIR2	YDL042C	PXR1	P53335	271 aa	Predicted RBP	4.59	□□□□□ -1.67
SIR2	YDL042C	IRC4	Q03036	179 aa		4.59	□□□□□ -1.67
SIR2	YDL042C	YDR115W	Q04598	105 aa		4.59	□□□□□ -1.67
SIR2	YDL042C	RPL21B	Q12672	160 aa	Known RBP	4.59	□□□□□ -1.67
SIR2	YDL042C	GCD2	P12754	651 aa	Predicted RBP	4.58	□□□□□ -1.68
SIR2	YDL042C	SWC5	P38326	303 aa		4.58	□□□□□ -1.68
SIR2	YDL042C	YPS5	P53057	165 aa		4.58	□□□□□ -1.68
SIR2	YDL042C	YOR376W	Q08900	122 aa		4.58	□□□□□ -1.68
SIR2	YDL042C	DDC1	Q08949	612 aa		4.58	□□□□□ -1.68
SIR2	YDL042C	RPN6	Q12377	434 aa		4.58	□□□□□ -1.68
SIR2	YDL042C	RBK1	P25332	333 aa		4.57	□□□□□ -1.68
SIR2	YDL042C	YFR018C	P43599	363 aa		4.57	□□□□□ -1.68
SIR2	YDL042C	YJR054W	P47114	497 aa		4.57	□□□□□ -1.68
SIR2	YDL042C	PGU1	P47180	361 aa		4.57	□□□□□ -1.68
SIR2	YDL042C	BIO3	P50277	480 aa		4.57	□□□□□ -1.68
SIR2	YDL042C	YGR015C	P53208	328 aa		4.57	□□□□□ -1.68
SIR2	YDL042C	PEX22	P39718	180 aa		4.57	□□□□□ -1.68
SIR2	YDL042C	MKC7	P53379	596 aa		4.57	□□□□□ -1.68
SIR2	YDL042C	HCH1	P53834	153 aa		4.57	□□□□□ -1.68
SIR2	YDL042C	RNH201	P53942	307 aa		4.57	□□□□□ -1.68
SIR2	YDL042C	KTR6	P54070	446 aa		4.57	□□□□□ -1.68
SIR2	YDL042C	TRM44	Q02648	567 aa	Known RBP	4.57	□□□□□ -1.68
SIR2	YDL042C	ACB1	P31787	87 aa		4.56	□□□□□ -1.68
SIR2	YDL042C	BUD2	P33314	1104 aa		4.56	□□□□□ -1.68
SIR2	YDL042C	MNN9	P39107	395 aa	Known RBP	4.56	□□□□□ -1.68
SIR2	YDL042C	UTP25	P40498	721 aa	Known RBP	4.56	□□□□□ -1.68
SIR2	YDL042C	YGL262W	P53054	175 aa		4.56	□□□□□ -1.68
SIR2	YDL042C	CUR1	Q06469	252 aa		4.56	□□□□□ -1.68
SIR2	YDL042C	LDB17	Q12342	491 aa		4.56	□□□□□ -1.68
SIR2	YDL042C	URA10	P30402	227 aa		4.55	□□□□□ -1.68
SIR2	YDL042C	ITR2	P30606	609 aa		4.55	□□□□□ -1.68
SIR2	YDL042C	SHE1	P38200	338 aa		4.55	□□□□□ -1.68
SIR2	YDL042C	SMF2	P38778	549 aa		4.55	□□□□□ -1.68
SIR2	YDL042C	STB1	P42845	420 aa		4.55	□□□□□ -1.68
SIR2	YDL042C	TAF10	Q12030	206 aa		4.55	□□□□□ -1.68
SIR2	YDL042C	HPR1	P17629	752 aa	Known RBP	4.54	□□□□□ -1.68
SIR2	YDL042C	YFH7	P43591	353 aa		4.54	□□□□□ -1.68
SIR2	YDL042C	RIB4	P50861	169 aa	Predicted RBP	4.54	□□□□□ -1.68
SIR2	YDL042C	SRO7	Q12038	1033 aa		4.54	□□□□□ -1.68
SIR2	YDL042C	PAA1	Q12447	191 aa	Known RBP	4.54	□□□□□ -1.68
SIR2	YDL042C	SAL1	D6W196	494 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms