RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W RRP36Q12481 300 aaPredicted RBP4.02□□□□□ -1.77
RER1YCL001W YKL018C-AQ3E7A7 99 aa4.02□□□□□ -1.77
RER1YCL001W PRP8P33334 2413 aaKnown RBP4.02□□□□□ -1.77
RER1YCL001W ARG81P05085 880 aa4.01□□□□□ -1.77
RER1YCL001W RPL15AP05748 204 aaKnown RBP4.01□□□□□ -1.77
RER1YCL001W MSS116P15424 664 aaKnown RBP4.01□□□□□ -1.77
RER1YCL001W RPC19P28000 142 aaKnown RBP4.01□□□□□ -1.77
RER1YCL001W SSE2P32590 693 aaKnown RBP4.01□□□□□ -1.77
RER1YCL001W CAT2P32796 670 aaKnown RBP4.01□□□□□ -1.77
RER1YCL001W TIF3P34167 436 aaKnown RBP4.01□□□□□ -1.77
RER1YCL001W VPS52P39904 641 aa4.01□□□□□ -1.77
RER1YCL001W GAB1P41733 394 aa4.01□□□□□ -1.77
RER1YCL001W RQC1Q05468 723 aaKnown RBP4.01□□□□□ -1.77
RER1YCL001W FMP40Q08968 688 aaPredicted RBP4.01□□□□□ -1.77
RER1YCL001W AKR2Q12013 749 aa4.01□□□□□ -1.77
RER1YCL001W PAR32Q12515 295 aaKnown RBP4.01□□□□□ -1.77
RER1YCL001W GCN4P03069 281 aa4□□□□□ -1.77
RER1YCL001W CBP2P03874 630 aaPredicted RBP4□□□□□ -1.77
RER1YCL001W DAP2P18962 818 aa4□□□□□ -1.77
RER1YCL001W IDH2P28241 369 aaKnown RBP4□□□□□ -1.77
RER1YCL001W ACH1P32316 526 aa4□□□□□ -1.77
RER1YCL001W YBR144CP34215 104 aa4□□□□□ -1.77
RER1YCL001W PTC1P35182 281 aa4□□□□□ -1.77
RER1YCL001W SWH1P35845 1188 aa4□□□□□ -1.77
RER1YCL001W ICS2P38284 255 aa4□□□□□ -1.77
RER1YCL001W YIL067CP40514 678 aa4□□□□□ -1.77
RER1YCL001W CUP9P41817 306 aa4□□□□□ -1.77
RER1YCL001W FMP32P43557 207 aa4□□□□□ -1.77
RER1YCL001W YPI1P43587 155 aa4□□□□□ -1.77
RER1YCL001W RBG2P53295 368 aaKnown RBP4□□□□□ -1.77
RER1YCL001W REX2P54964 269 aaKnown RBP4□□□□□ -1.77
RER1YCL001W RSM23Q01163 450 aa4□□□□□ -1.77
RER1YCL001W OAZ1Q02803 292 aa4□□□□□ -1.77
RER1YCL001W MMT1Q03218 510 aa4□□□□□ -1.77
RER1YCL001W YET2Q04210 160 aa4□□□□□ -1.77
RER1YCL001W YMR310CQ04867 317 aaPredicted RBP4□□□□□ -1.77
RER1YCL001W FAR10Q06001 478 aa4□□□□□ -1.77
RER1YCL001W YPR172WQ06608 200 aa4□□□□□ -1.77
RER1YCL001W YPR174CQ06616 221 aaPredicted RBP4□□□□□ -1.77
RER1YCL001W RPN5Q12250 445 aaKnown RBP4□□□□□ -1.77
RER1YCL001W MEC1P38111 2368 aa3.99□□□□□ -1.77
RER1YCL001W IPP1P00817 287 aaKnown RBP3.99□□□□□ -1.77
RER1YCL001W GDH1P07262 454 aaKnown RBP3.99□□□□□ -1.77
RER1YCL001W PUT2P07275 575 aa3.99□□□□□ -1.77
RER1YCL001W CBS1P14066 229 aa3.99□□□□□ -1.77
RER1YCL001W RPB5P20434 215 aa3.99□□□□□ -1.77
RER1YCL001W BOS1P25385 244 aa3.99□□□□□ -1.77
RER1YCL001W YCR102CP25608 368 aa3.99□□□□□ -1.77
RER1YCL001W MSN2P33748 704 aa3.99□□□□□ -1.77
RER1YCL001W STP2P38704 541 aa3.99□□□□□ -1.77
RER1YCL001W TRR2P38816 342 aa3.99□□□□□ -1.77
RER1YCL001W CIN4P39110 191 aa3.99□□□□□ -1.77
RER1YCL001W UTP25P40498 721 aaKnown RBP3.99□□□□□ -1.77
RER1YCL001W STE24P47154 453 aa3.99□□□□□ -1.77
RER1YCL001W TIM10P87108 93 aa3.99□□□□□ -1.77
RER1YCL001W RHO4Q00246 291 aa3.99□□□□□ -1.77
RER1YCL001W MSC1Q03104 513 aa3.99□□□□□ -1.77
RER1YCL001W MSS11Q03825 758 aa3.99□□□□□ -1.77
RER1YCL001W SSQ1Q05931 657 aaPredicted RBP3.99□□□□□ -1.77
RER1YCL001W YPR091CQ06833 770 aa3.99□□□□□ -1.77
RER1YCL001W YOL131WQ08270 108 aa3.99□□□□□ -1.77
RER1YCL001W SGT1Q08446 395 aa3.99□□□□□ -1.77
RER1YCL001W YOR365CQ08844 703 aa3.99□□□□□ -1.77
RER1YCL001W RDR1Q08904 546 aa3.99□□□□□ -1.77
RER1YCL001W TPO4Q12256 659 aa3.99□□□□□ -1.77
RER1YCL001W YJR112W-AQ3E743 109 aa3.99□□□□□ -1.77
RER1YCL001W ATP6P00854 259 aa3.98□□□□□ -1.77
RER1YCL001W RAS2P01120 322 aaKnown RBP3.98□□□□□ -1.77
RER1YCL001W BUD5P25300 642 aaPredicted RBP3.98□□□□□ -1.77
RER1YCL001W RVS161P25343 265 aaKnown RBP3.98□□□□□ -1.77
RER1YCL001W PBN1P25580 416 aa3.98□□□□□ -1.77
RER1YCL001W SEC17P32602 292 aa3.98□□□□□ -1.77
RER1YCL001W SSO1P32867 290 aa3.98□□□□□ -1.77
RER1YCL001W PTR2P32901 601 aa3.98□□□□□ -1.77
RER1YCL001W RFC3P38629 340 aa3.98□□□□□ -1.77
RER1YCL001W FAA2P39518 744 aa3.98□□□□□ -1.77
RER1YCL001W YJL213WP40896 331 aa3.98□□□□□ -1.77
RER1YCL001W ALB1P47019 175 aaPredicted RBP3.98□□□□□ -1.77
RER1YCL001W COS10P52924 374 aa3.98□□□□□ -1.77
RER1YCL001W YHC1Q05900 231 aaKnown RBP3.98□□□□□ -1.77
RER1YCL001W GMC2Q06201 188 aa3.98□□□□□ -1.77
RER1YCL001W GGA1Q06336 557 aa3.98□□□□□ -1.77
RER1YCL001W TSR2Q06672 205 aaKnown RBP3.98□□□□□ -1.77
RER1YCL001W SLF1Q12034 447 aaKnown RBP3.98□□□□□ -1.77
RER1YCL001W NSL1Q12143 216 aa3.98□□□□□ -1.77
RER1YCL001W YOR032W-AQ8TGS1 66 aa3.98□□□□□ -1.77
RER1YCL001W CYR1P08678 2026 aaKnown RBP3.98□□□□□ -1.77
RER1YCL001W FAS1P07149 2051 aaKnown RBP3.98□□□□□ -1.77
RER1YCL001W CSM1P25651 190 aa3.97□□□□□ -1.77
RER1YCL001W NAM9P27929 486 aa3.97□□□□□ -1.77
RER1YCL001W RAD14P28519 371 aa3.97□□□□□ -1.77
RER1YCL001W ZIP1P31111 875 aa3.97□□□□□ -1.77
RER1YCL001W MRPL4P36517 319 aa3.97□□□□□ -1.77
RER1YCL001W MRPL17P36528 281 aa3.97□□□□□ -1.77
RER1YCL001W ROT2P38138 954 aa3.97□□□□□ -1.77
RER1YCL001W SRO77P38163 1010 aa3.97□□□□□ -1.77
RER1YCL001W HEK2P38199 381 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
RER1YCL001W IST2P38250 946 aa3.97□□□□□ -1.77
RER1YCL001W AIM2P39721 246 aa3.97□□□□□ -1.77
RER1YCL001W ALG5P40350 334 aa3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms