RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 WARS2Q9UGM6 360 aaKnown RBP12.53□□□□□ -0.4
PRKN-206ENST00000366898 USTQ9Y2C2 406 aa12.53□□□□□ -0.4
PRKN-206ENST00000366898 CTDP1Q9Y5B0 961 aaPredicted RBP12.53□□□□□ -0.4
PRKN-206ENST00000366898 GTPBP6O43824 516 aaPredicted RBP12.52□□□□□ -0.4
PRKN-206ENST00000366898 HSD17B3P37058 310 aa12.52□□□□□ -0.4
PRKN-206ENST00000366898 CPA2P48052 419 aa12.52□□□□□ -0.4
PRKN-206ENST00000366898 TRIP10Q15642 601 aa12.52□□□□□ -0.4
PRKN-206ENST00000366898 INAQ16352 499 aa12.52□□□□□ -0.4
PRKN-206ENST00000366898 SNX30Q5VWJ9 437 aa12.52□□□□□ -0.4
PRKN-206ENST00000366898 HEATR4Q86WZ0 1026 aa12.52□□□□□ -0.4
PRKN-206ENST00000366898 SNX29Q8TEQ0 813 aa12.52□□□□□ -0.4
PRKN-206ENST00000366898 KIFC2Q96AC6 838 aa12.52□□□□□ -0.4
PRKN-206ENST00000366898 ABHD8Q96I13 439 aa12.52□□□□□ -0.4
PRKN-206ENST00000366898 MTA3Q9BTC8 594 aa12.52□□□□□ -0.4
PRKN-206ENST00000366898 TXNDC16Q9P2K2 825 aa12.52□□□□□ -0.4
PRKN-206ENST00000366898 ATXN10Q9UBB4 475 aa12.52□□□□□ -0.4
PRKN-206ENST00000366898 HDAC9Q9UKV0 1011 aa12.52□□□□□ -0.4
PRKN-206ENST00000366898 BCL9O00512 1426 aa12.52□□□□□ -0.4
PRKN-206ENST00000366898 STRCQ7RTU9 1775 aa12.52□□□□□ -0.4
PRKN-206ENST00000366898 ATP1A4Q13733 1029 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 THOC5Q13769 683 aaKnown RBP12.52□□□□□ -0.41
PRKN-206ENST00000366898 NCAPHQ15003 741 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 USH1GQ495M9 461 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 SEPT12Q8IYM1 358 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 TUBB6Q9BUF5 446 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 ALG13Q9NP73 1137 aaKnown RBP12.52□□□□□ -0.41
PRKN-206ENST00000366898 NARFQ9UHQ1 456 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 IVNS1ABPQ9Y6Y0 642 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 LRRC37A3O60309 1634 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 MGEA5O60502 916 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 TBCAO75347 108 aaKnown RBP12.52□□□□□ -0.41
PRKN-206ENST00000366898 MCF2P10911 925 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 BAG6P46379 1132 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 TUFMP49411 452 aaKnown RBP12.52□□□□□ -0.41
PRKN-206ENST00000366898 MAP3K7CLP57077 242 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 KDSRQ06136 332 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 SPARCL1Q14515 664 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 ZYXQ15942 572 aaKnown RBP12.52□□□□□ -0.41
PRKN-206ENST00000366898 UTS2BQ765I0 119 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 RBM17Q96I25 401 aaKnown RBP12.52□□□□□ -0.41
PRKN-206ENST00000366898 TSNARE1Q96NA8 513 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 TUBE1Q9UJT0 475 aa12.52□□□□□ -0.41
PRKN-206ENST00000366898 RPS6KA4O75676 772 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 FGFR4P22455 802 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 USP46P62068 366 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 CACNB1Q02641 598 aaPredicted RBP12.51□□□□□ -0.41
PRKN-206ENST00000366898 MCL1Q07820 350 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 TTMPQ5BVD1 217 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 DRAXINQ8NBI3 349 aaPredicted RBP12.51□□□□□ -0.41
PRKN-206ENST00000366898 TRIM55Q9BYV6 548 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 USP40Q9NVE5 1235 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 ARMCX3Q9UH62 379 aaPredicted RBP12.51□□□□□ -0.41
PRKN-206ENST00000366898 RBMX2Q9Y388 322 aaKnown RBP12.51□□□□□ -0.41
PRKN-206ENST00000366898 EXOC1LA0A1B0GW35 172 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 NOP56O00567 594 aaKnown RBP12.51□□□□□ -0.41
PRKN-206ENST00000366898 RAD51CO43502 376 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 GYPCP04921 128 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 PPIDQ08752 370 aaKnown RBP12.51□□□□□ -0.41
PRKN-206ENST00000366898 TNIP1Q15025 636 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 LRRC41Q15345 812 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 YTHDF3Q7Z739 585 aaKnown RBP12.51□□□□□ -0.41
PRKN-206ENST00000366898 SLC51AQ86UW1 340 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 HPS3Q969F9 1004 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 SH3GL1Q99961 368 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 TMEM47Q9BQJ4 181 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 PCDHA4Q9UN74 947 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 ZNF148Q9UQR1 794 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 LRCH1Q9Y2L9 728 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 THRAP3Q9Y2W1 955 aaKnown RBP12.51□□□□□ -0.41
PRKN-206ENST00000366898 DCCP43146 1447 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 AFDNP55196 1824 aaKnown RBP12.51□□□□□ -0.41
PRKN-206ENST00000366898 SERPINB2P05120 415 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 ATF2P15336 505 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 PLCG2P16885 1265 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 OCA2Q04671 838 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 MESDQ14696 234 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 NR1I3Q14994 352 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 CALCRLQ16602 461 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 HERC4Q5GLZ8 1057 aaPredicted RBP12.51□□□□□ -0.41
PRKN-206ENST00000366898 KCTD1Q719H9 257 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 EPM2AIP1Q7L775 607 aaPredicted RBP12.51□□□□□ -0.41
PRKN-206ENST00000366898 TRAPPC11Q7Z392 1133 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 PPP1R14BQ96C90 147 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 GJD4Q96KN9 370 aaPredicted RBP12.51□□□□□ -0.41
PRKN-206ENST00000366898 RIOK1Q9BRS2 568 aaKnown RBP12.51□□□□□ -0.41
PRKN-206ENST00000366898 LIMA1Q9UHB6 759 aaKnown RBP12.51□□□□□ -0.41
PRKN-206ENST00000366898 TROAPQ12815 778 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 PLS1Q14651 629 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 GALNT17Q6IS24 598 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 SESTD1Q86VW0 696 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 PALM2Q8IXS6 379 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 PBKQ96KB5 322 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 ABCF3Q9NUQ8 709 aa12.51□□□□□ -0.41
PRKN-206ENST00000366898 XDHP47989 1333 aa12.5□□□□□ -0.41
PRKN-206ENST00000366898 PSMD14O00487 310 aa12.5□□□□□ -0.41
PRKN-206ENST00000366898 P4HA2O15460 535 aa12.5□□□□□ -0.41
PRKN-206ENST00000366898 VCAM1P19320 739 aa12.5□□□□□ -0.41
PRKN-206ENST00000366898 LONP1P36776 959 aaKnown RBP12.5□□□□□ -0.41
PRKN-206ENST00000366898 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
PRKN-206ENST00000366898 IYDQ6PHW0 289 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms