RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Ampd3O08739 766 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 EgfP01132 1217 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Gm428Q3UTE2 360 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 E2f8Q58FA4 860 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Kpna1Q60960 538 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Q6P2K3 674 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Tas2r124Q7M718 309 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Olfr538Q7TRT5 310 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Ano1Q8BHY3 960 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Kif2bQ8C0N1 668 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Ccdc113Q8C5T8 377 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Fam20aQ8CID3 541 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 MiosQ8VE19 875 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Olfr1352Q8VGX5 309 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Mob2Q8VI63 235 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Polr3fQ921X6 316 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Slc12a9Q99MR3 914 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Josd2Q9CR30 188 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Armc9Q9D2I5 817 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Snrnp35Q9D384 244 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Clec1bQ9JL99 229 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Git2Q9JLQ2 708 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Bcl11aQ9QYE3 773 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Plxna4Q80UG2 1893 aa13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Myo5aQ99104 1853 aaKnown RBP13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Nup210Q9QY81 1886 aaKnown RBP13.55□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Pex10B1AUE5 324 aa13.54□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Syn1O88935 706 aa13.54□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Gtf3c3Q3TMP1 882 aa13.54□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Exoc3Q6KAR6 755 aa13.54□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Ppp2r5aQ6PD03 486 aa13.54□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Mrgprb8Q7TN51 330 aa13.54□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 HomezQ80W88 542 aa13.54□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Znf467Q8JZL0 594 aa13.54□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Kremen2Q8K1S7 461 aa13.54□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Cldnd1Q9CQX5 253 aa13.54□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Gde1Q9JL56 331 aa13.54□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Egfl7Q9QXT5 275 aa13.54□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Phtf1Q9QZ09 761 aa13.54□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Slc26a4Q9R155 780 aa13.54□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Scn5aQ9JJV9 2019 aa13.54□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Cypt3B1AY64 174 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Gm5134E9QAB5 671 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Entpd2O55026 495 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Ercc5P35689 1170 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Arf4P61750 180 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Cyb5r4Q3TDX8 528 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Znrf3Q5SSZ7 913 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Klra7Q60654 280 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Cyp7b1Q60991 507 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Znf365Q8BG89 408 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Metap1Q8BP48 386 aaKnown RBP13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Rsl1d1Q8BVY0 452 aaKnown RBP13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Acvr1cQ8K348 493 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Hexim1Q8R409 356 aaKnown RBP13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Smg8Q8VE18 991 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Rsph1Q8VIG3 301 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 B4galt3Q91YY2 395 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Dqx1Q924H9 718 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Calml3Q9D6P8 149 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Akr1a1Q9JII6 325 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Eya4Q9Z191 616 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 TectaO08523 2155 aa13.53□□□□□ -0.24
Ccdc28b-202ENSMUST00000106035 Plekha5E9Q6H8 1269 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Efna5O08543 228 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Rabep1O35551 862 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 PparaP23204 468 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Cd22P35329 862 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 GaltQ03249 379 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Nat8lQ3UGX3 299 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Capn13Q3UW68 665 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Scarf1Q5ND28 820 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Ccna1Q61456 421 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Has1Q61647 583 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Atp11bQ6DFW5 1175 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Mtss1lQ6P9S0 715 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Pwp2Q8BU03 919 aaKnown RBP13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Ddx19bQ8BZY3 494 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Smc2Q8CG48 1191 aaKnown RBP13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Olfr390Q8VEZ7 311 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Fuca2Q99KR8 461 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Scyl1Q9EQC5 806 aaKnown RBP13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Arl6ip4Q9JM93 229 aa13.52□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Umodl1Q5DID3 1319 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Krt36B1AQ75 473 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Arhgap6O54834 987 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Idh1O88844 414 aaKnown RBP13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 P01648 108 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Got1P05201 413 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 EpoP07321 192 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 GlulP15105 373 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Setd4P58467 439 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Paxbp1P58501 919 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Smad4P97471 551 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Edem3Q2HXL6 931 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Mcm7Q61881 719 aaKnown RBP13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Smad2Q62432 467 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Lrfn2Q80TG9 788 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Gpc3Q8CFZ4 579 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Eif2b5Q8CHW4 717 aa13.51□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 55.1 ms