Protein–RNA interactions for Protein: Q8VIG3

Rsph1, Radial spoke head 1 homolog, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph1Q8VIG3 Gm25239-201ENSMUST00000174915 86 ntBASIC41.07■■■■■ 4.17
Rsph1Q8VIG3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.95■■■■□ 3.67
Rsph1Q8VIG3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
Rsph1Q8VIG3 Gm15042-201ENSMUST00000120212 883 ntBASIC35.9■■■■□ 3.34
Rsph1Q8VIG3 Gm24109-201ENSMUST00000175489 103 ntBASIC35.58■■■■□ 3.29
Rsph1Q8VIG3 Gm15045-201ENSMUST00000117359 883 ntBASIC35.05■■■■□ 3.2
Rsph1Q8VIG3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Rsph1Q8VIG3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.72■■■■□ 3.15
Rsph1Q8VIG3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
Rsph1Q8VIG3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Rsph1Q8VIG3 Gm23366-201ENSMUST00000175022 89 ntBASIC34.39■■■■□ 3.1
Rsph1Q8VIG3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Rsph1Q8VIG3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Rsph1Q8VIG3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.52■■■□□ 2.96
Rsph1Q8VIG3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Rsph1Q8VIG3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.21■■■□□ 2.91
Rsph1Q8VIG3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.13■■■□□ 2.89
Rsph1Q8VIG3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Rsph1Q8VIG3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Rsph1Q8VIG3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.88■■■□□ 2.85
Rsph1Q8VIG3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.88■■■□□ 2.85
Rsph1Q8VIG3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.87■■■□□ 2.85
Rsph1Q8VIG3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Rsph1Q8VIG3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Rsph1Q8VIG3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Rsph1Q8VIG3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Rsph1Q8VIG3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.56■■■□□ 2.8
Rsph1Q8VIG3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Rsph1Q8VIG3 Gm25238-201ENSMUST00000174914 89 ntBASIC32.38■■■□□ 2.77
Rsph1Q8VIG3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Rsph1Q8VIG3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Rsph1Q8VIG3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
Rsph1Q8VIG3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.34■■■□□ 2.77
Rsph1Q8VIG3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.77
Rsph1Q8VIG3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.99■■■□□ 2.71
Rsph1Q8VIG3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
Rsph1Q8VIG3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Rsph1Q8VIG3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Rsph1Q8VIG3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.68■■■□□ 2.66
Rsph1Q8VIG3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.68■■■□□ 2.66
Rsph1Q8VIG3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.63■■■□□ 2.65
Rsph1Q8VIG3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Rsph1Q8VIG3 Psd-208ENSMUST00000224556 2034 ntBASIC31.6■■■□□ 2.65
Rsph1Q8VIG3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
Rsph1Q8VIG3 Gm27325-201ENSMUST00000175467 74 ntBASIC31.46■■■□□ 2.63
Rsph1Q8VIG3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.32■■■□□ 2.6
Rsph1Q8VIG3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rsph1Q8VIG3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.2■■■□□ 2.58
Rsph1Q8VIG3 Gm25262-201ENSMUST00000174934 133 ntBASIC31.17■■■□□ 2.58
Rsph1Q8VIG3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Rsph1Q8VIG3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rsph1Q8VIG3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Rsph1Q8VIG3 Rab21-202ENSMUST00000218831 843 ntBASIC30.97■■■□□ 2.55
Rsph1Q8VIG3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.9■■■□□ 2.54
Rsph1Q8VIG3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Rsph1Q8VIG3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Rsph1Q8VIG3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.88■■■□□ 2.53
Rsph1Q8VIG3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.83■■■□□ 2.53
Rsph1Q8VIG3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Rsph1Q8VIG3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Rsph1Q8VIG3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.67■■■□□ 2.5
Rsph1Q8VIG3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Rsph1Q8VIG3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.55■■■□□ 2.48
Rsph1Q8VIG3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.53■■■□□ 2.48
Rsph1Q8VIG3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.51■■■□□ 2.47
Rsph1Q8VIG3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
Rsph1Q8VIG3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Rsph1Q8VIG3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Rsph1Q8VIG3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Rsph1Q8VIG3 Gm26115-201ENSMUST00000175605 87 ntBASIC30.41■■■□□ 2.46
Rsph1Q8VIG3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
Rsph1Q8VIG3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Rsph1Q8VIG3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Rsph1Q8VIG3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Rsph1Q8VIG3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Rsph1Q8VIG3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.34■■■□□ 2.45
Rsph1Q8VIG3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Rsph1Q8VIG3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Rsph1Q8VIG3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Rsph1Q8VIG3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Rsph1Q8VIG3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.2■■■□□ 2.43
Rsph1Q8VIG3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rsph1Q8VIG3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Rsph1Q8VIG3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Rsph1Q8VIG3 Gm8109-201ENSMUST00000194076 746 ntBASIC30.12■■■□□ 2.41
Rsph1Q8VIG3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Rsph1Q8VIG3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Rsph1Q8VIG3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.09■■■□□ 2.41
Rsph1Q8VIG3 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.04■■■□□ 2.4
Rsph1Q8VIG3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Rsph1Q8VIG3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rsph1Q8VIG3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.98■■■□□ 2.39
Rsph1Q8VIG3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.98■■■□□ 2.39
Rsph1Q8VIG3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Rsph1Q8VIG3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Rsph1Q8VIG3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Rsph1Q8VIG3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
Rsph1Q8VIG3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.84■■■□□ 2.37
Rsph1Q8VIG3 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.81■■■□□ 2.36
Rsph1Q8VIG3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms