Protein–RNA interactions for Protein: Q3UTE2

Gm428, Predicted gene 428, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm428Q3UTE2 Gm25239-201ENSMUST00000174915 86 ntBASIC41.36■■■■■ 4.21
Gm428Q3UTE2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.24■■■■□ 3.71
Gm428Q3UTE2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
Gm428Q3UTE2 Gm15042-201ENSMUST00000120212 883 ntBASIC36.08■■■■□ 3.37
Gm428Q3UTE2 Gm24109-201ENSMUST00000175489 103 ntBASIC35.86■■■■□ 3.33
Gm428Q3UTE2 Gm15045-201ENSMUST00000117359 883 ntBASIC35.27■■■■□ 3.24
Gm428Q3UTE2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Gm428Q3UTE2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Gm428Q3UTE2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.94■■■■□ 3.18
Gm428Q3UTE2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
Gm428Q3UTE2 Gm23366-201ENSMUST00000175022 89 ntBASIC34.56■■■■□ 3.12
Gm428Q3UTE2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Gm428Q3UTE2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Gm428Q3UTE2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.9■■■■□ 3.02
Gm428Q3UTE2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Gm428Q3UTE2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.43■■■□□ 2.94
Gm428Q3UTE2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.38■■■□□ 2.93
Gm428Q3UTE2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Gm428Q3UTE2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.19■■■□□ 2.9
Gm428Q3UTE2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
Gm428Q3UTE2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.17■■■□□ 2.9
Gm428Q3UTE2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.1■■■□□ 2.89
Gm428Q3UTE2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
Gm428Q3UTE2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Gm428Q3UTE2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Gm428Q3UTE2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Gm428Q3UTE2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Gm428Q3UTE2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.7■■■□□ 2.83
Gm428Q3UTE2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Gm428Q3UTE2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
Gm428Q3UTE2 Gm25238-201ENSMUST00000174914 89 ntBASIC32.66■■■□□ 2.82
Gm428Q3UTE2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Gm428Q3UTE2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Gm428Q3UTE2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.55■■■□□ 2.8
Gm428Q3UTE2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Gm428Q3UTE2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Gm428Q3UTE2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
Gm428Q3UTE2 Psd-208ENSMUST00000224556 2034 ntBASIC32.09■■■□□ 2.73
Gm428Q3UTE2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.9■■■□□ 2.7
Gm428Q3UTE2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Gm428Q3UTE2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.85■■■□□ 2.69
Gm428Q3UTE2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Gm428Q3UTE2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.74■■■□□ 2.67
Gm428Q3UTE2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
Gm428Q3UTE2 Gm27325-201ENSMUST00000175467 74 ntBASIC31.63■■■□□ 2.65
Gm428Q3UTE2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
Gm428Q3UTE2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Gm428Q3UTE2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.48■■■□□ 2.63
Gm428Q3UTE2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Gm428Q3UTE2 Gm25262-201ENSMUST00000174934 133 ntBASIC31.35■■■□□ 2.61
Gm428Q3UTE2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.34■■■□□ 2.61
Gm428Q3UTE2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Gm428Q3UTE2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Gm428Q3UTE2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Gm428Q3UTE2 Rab21-202ENSMUST00000218831 843 ntBASIC31.11■■■□□ 2.57
Gm428Q3UTE2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.1■■■□□ 2.57
Gm428Q3UTE2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.03■■■□□ 2.56
Gm428Q3UTE2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.02■■■□□ 2.56
Gm428Q3UTE2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Gm428Q3UTE2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.92■■■□□ 2.54
Gm428Q3UTE2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Gm428Q3UTE2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Gm428Q3UTE2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Gm428Q3UTE2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Gm428Q3UTE2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.78■■■□□ 2.52
Gm428Q3UTE2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
Gm428Q3UTE2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.71■■■□□ 2.51
Gm428Q3UTE2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.5
Gm428Q3UTE2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.69■■■□□ 2.5
Gm428Q3UTE2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Gm428Q3UTE2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Gm428Q3UTE2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.62■■■□□ 2.49
Gm428Q3UTE2 Gm26115-201ENSMUST00000175605 87 ntBASIC30.59■■■□□ 2.49
Gm428Q3UTE2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Gm428Q3UTE2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Gm428Q3UTE2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Gm428Q3UTE2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Gm428Q3UTE2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Gm428Q3UTE2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Gm428Q3UTE2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Gm428Q3UTE2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Gm428Q3UTE2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Gm428Q3UTE2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Gm428Q3UTE2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Gm428Q3UTE2 Gm8109-201ENSMUST00000194076 746 ntBASIC30.36■■■□□ 2.45
Gm428Q3UTE2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Gm428Q3UTE2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.34■■■□□ 2.45
Gm428Q3UTE2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Gm428Q3UTE2 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.29■■■□□ 2.44
Gm428Q3UTE2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.29■■■□□ 2.44
Gm428Q3UTE2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Gm428Q3UTE2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Gm428Q3UTE2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.2■■■□□ 2.43
Gm428Q3UTE2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Gm428Q3UTE2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.12■■■□□ 2.41
Gm428Q3UTE2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Gm428Q3UTE2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Gm428Q3UTE2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.07■■■□□ 2.4
Gm428Q3UTE2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Gm428Q3UTE2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms