Protein–RNA interactions for Protein: Q8CFZ4

Gpc3, Glypican-3, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc3Q8CFZ4 Gm25239-201ENSMUST00000174915 86 ntBASIC41.45■■■■■ 4.23
Gpc3Q8CFZ4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.29■■■■□ 3.72
Gpc3Q8CFZ4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.64
Gpc3Q8CFZ4 Gm15042-201ENSMUST00000120212 883 ntBASIC36.29■■■■□ 3.4
Gpc3Q8CFZ4 Gm24109-201ENSMUST00000175489 103 ntBASIC35.9■■■■□ 3.34
Gpc3Q8CFZ4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Gpc3Q8CFZ4 Gm15045-201ENSMUST00000117359 883 ntBASIC35.51■■■■□ 3.28
Gpc3Q8CFZ4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
Gpc3Q8CFZ4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Gpc3Q8CFZ4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.98■■■■□ 3.19
Gpc3Q8CFZ4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
Gpc3Q8CFZ4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.69■■■■□ 3.14
Gpc3Q8CFZ4 Gm23366-201ENSMUST00000175022 89 ntBASIC34.62■■■■□ 3.13
Gpc3Q8CFZ4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Gpc3Q8CFZ4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Gpc3Q8CFZ4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Gpc3Q8CFZ4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.67■■■□□ 2.98
Gpc3Q8CFZ4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.56■■■□□ 2.96
Gpc3Q8CFZ4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.48■■■□□ 2.95
Gpc3Q8CFZ4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.42■■■□□ 2.94
Gpc3Q8CFZ4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Gpc3Q8CFZ4 Psd-208ENSMUST00000224556 2034 ntBASIC33.36■■■□□ 2.93
Gpc3Q8CFZ4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.24■■■□□ 2.91
Gpc3Q8CFZ4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.17■■■□□ 2.9
Gpc3Q8CFZ4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Gpc3Q8CFZ4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Gpc3Q8CFZ4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.9
Gpc3Q8CFZ4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.05■■■□□ 2.88
Gpc3Q8CFZ4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
Gpc3Q8CFZ4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.97■■■□□ 2.87
Gpc3Q8CFZ4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Gpc3Q8CFZ4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Gpc3Q8CFZ4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Gpc3Q8CFZ4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Gpc3Q8CFZ4 Gm25238-201ENSMUST00000174914 89 ntBASIC32.7■■■□□ 2.83
Gpc3Q8CFZ4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.65■■■□□ 2.82
Gpc3Q8CFZ4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Gpc3Q8CFZ4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.37■■■□□ 2.77
Gpc3Q8CFZ4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Gpc3Q8CFZ4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
Gpc3Q8CFZ4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Gpc3Q8CFZ4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.07■■■□□ 2.72
Gpc3Q8CFZ4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Gpc3Q8CFZ4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Gpc3Q8CFZ4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.94■■■□□ 2.7
Gpc3Q8CFZ4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Gpc3Q8CFZ4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
Gpc3Q8CFZ4 Gm27325-201ENSMUST00000175467 74 ntBASIC31.81■■■□□ 2.68
Gpc3Q8CFZ4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Gpc3Q8CFZ4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.78■■■□□ 2.68
Gpc3Q8CFZ4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.69■■■□□ 2.66
Gpc3Q8CFZ4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Gpc3Q8CFZ4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
Gpc3Q8CFZ4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Gpc3Q8CFZ4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.54■■■□□ 2.64
Gpc3Q8CFZ4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.54■■■□□ 2.64
Gpc3Q8CFZ4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Gpc3Q8CFZ4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Gpc3Q8CFZ4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.38■■■□□ 2.61
Gpc3Q8CFZ4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Gpc3Q8CFZ4 Gm25262-201ENSMUST00000174934 133 ntBASIC31.26■■■□□ 2.59
Gpc3Q8CFZ4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Gpc3Q8CFZ4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Gpc3Q8CFZ4 Rab21-202ENSMUST00000218831 843 ntBASIC31.19■■■□□ 2.58
Gpc3Q8CFZ4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.15■■■□□ 2.58
Gpc3Q8CFZ4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Gpc3Q8CFZ4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Gpc3Q8CFZ4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.08■■■□□ 2.57
Gpc3Q8CFZ4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Gpc3Q8CFZ4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Gpc3Q8CFZ4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Gpc3Q8CFZ4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.95■■■□□ 2.54
Gpc3Q8CFZ4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Gpc3Q8CFZ4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.92■■■□□ 2.54
Gpc3Q8CFZ4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Gpc3Q8CFZ4 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.91■■■□□ 2.54
Gpc3Q8CFZ4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Gpc3Q8CFZ4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
Gpc3Q8CFZ4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Gpc3Q8CFZ4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Gpc3Q8CFZ4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.78■■■□□ 2.52
Gpc3Q8CFZ4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Gpc3Q8CFZ4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.76■■■□□ 2.51
Gpc3Q8CFZ4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Gpc3Q8CFZ4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Gpc3Q8CFZ4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
Gpc3Q8CFZ4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Gpc3Q8CFZ4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.64■■■□□ 2.5
Gpc3Q8CFZ4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.59■■■□□ 2.49
Gpc3Q8CFZ4 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.56■■■□□ 2.48
Gpc3Q8CFZ4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Gpc3Q8CFZ4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.56■■■□□ 2.48
Gpc3Q8CFZ4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Gpc3Q8CFZ4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Gpc3Q8CFZ4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Gpc3Q8CFZ4 Gm26115-201ENSMUST00000175605 87 ntBASIC30.45■■■□□ 2.47
Gpc3Q8CFZ4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Gpc3Q8CFZ4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Gpc3Q8CFZ4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Gpc3Q8CFZ4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms