RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 COG6P53959 839 aa-2.67□□□□□ -2.84
snR40snR40 NSE1Q07913 336 aa-2.67□□□□□ -2.84
snR40snR40 MSA1Q08471 629 aa-2.67□□□□□ -2.84
snR40snR40 SCM3Q12334 223 aa-2.67□□□□□ -2.84
snR40snR40 YNL146C-AQ3E7Z1 64 aa-2.67□□□□□ -2.84
snR40snR40 ATP1P07251 545 aaKnown RBP-2.68□□□□□ -2.84
snR40snR40 MCR1P36060 302 aaKnown RBP-2.68□□□□□ -2.84
snR40snR40 VMA13P41807 478 aaKnown RBP-2.68□□□□□ -2.84
snR40snR40 VTC2P43585 828 aa-2.68□□□□□ -2.84
snR40snR40 BNA1P47096 177 aa-2.68□□□□□ -2.84
snR40snR40 KEL2P50090 882 aa-2.68□□□□□ -2.84
snR40snR40 ARC35P53731 342 aaKnown RBP-2.68□□□□□ -2.84
snR40snR40 SML1Q04964 104 aa-2.68□□□□□ -2.84
snR40snR40 YOL087CQ99247 1116 aa-2.68□□□□□ -2.84
snR40snR40 GAL80P04387 435 aa-2.69□□□□□ -2.84
snR40snR40 NUC1P08466 329 aa-2.69□□□□□ -2.84
snR40snR40 SLM6P38343 150 aa-2.69□□□□□ -2.84
snR40snR40 MNL1P38888 796 aa-2.69□□□□□ -2.84
snR40snR40 YFL065CP43539 102 aa-2.69□□□□□ -2.84
snR40snR40 YNL247WP53852 767 aaKnown RBP-2.69□□□□□ -2.84
snR40snR40 MRPS8Q03799 155 aa-2.69□□□□□ -2.84
snR40snR40 MDM30Q05930 598 aa-2.69□□□□□ -2.84
snR40snR40 SNT309Q06091 175 aaPredicted RBP-2.69□□□□□ -2.84
snR40snR40 RPN8Q08723 338 aaKnown RBP-2.69□□□□□ -2.84
snR40snR40 AKR2Q12013 749 aa-2.69□□□□□ -2.84
snR40snR40 GPH1P06738 902 aaKnown RBP-2.7□□□□□ -2.84
snR40snR40 MAS1P10507 462 aa-2.7□□□□□ -2.84
snR40snR40 POX1P13711 748 aa-2.7□□□□□ -2.84
snR40snR40 WBP1P33767 430 aaKnown RBP-2.7□□□□□ -2.84
snR40snR40 MUD2P36084 527 aaKnown RBP-2.7□□□□□ -2.84
snR40snR40 MOB2P43563 287 aa-2.7□□□□□ -2.84
snR40snR40 OSW7P43611 510 aa-2.7□□□□□ -2.84
snR40snR40 OST3P48439 350 aa-2.7□□□□□ -2.84
snR40snR40 RAD30Q04049 632 aa-2.7□□□□□ -2.84
snR40snR40 MHT1Q12525 324 aa-2.7□□□□□ -2.84
snR40snR40 YLR157W-EP0CF00 54 aa-2.71□□□□□ -2.84
snR40snR40 RNA1P11745 407 aaKnown RBP-2.71□□□□□ -2.84
snR40snR40 URA10P30402 227 aa-2.71□□□□□ -2.84
snR40snR40 YKL133CP36066 463 aa-2.71□□□□□ -2.84
snR40snR40 YKL071WP36086 256 aa-2.71□□□□□ -2.84
snR40snR40 PHO88P38264 188 aaPredicted RBP-2.71□□□□□ -2.84
snR40snR40 ARN2P38724 620 aa-2.71□□□□□ -2.84
snR40snR40 DSE1P40077 573 aa-2.71□□□□□ -2.84
snR40snR40 MAL13P53338 473 aa-2.71□□□□□ -2.84
snR40snR40 SUR7P54003 302 aa-2.71□□□□□ -2.84
snR40snR40 MRPL13Q02204 264 aa-2.71□□□□□ -2.84
snR40snR40 RQC1Q05468 723 aaKnown RBP-2.71□□□□□ -2.84
snR40snR40 NBP2Q12163 236 aa-2.71□□□□□ -2.84
snR40snR40 ISA2Q12425 185 aa-2.71□□□□□ -2.84
snR40snR40 YPT6Q99260 215 aa-2.71□□□□□ -2.84
snR40snR40 MSS18P08593 268 aa-2.72□□□□□ -2.84
snR40snR40 GRX4P32642 244 aa-2.72□□□□□ -2.84
snR40snR40 DOG1P38774 246 aa-2.72□□□□□ -2.84
snR40snR40 PET8P38921 284 aa-2.72□□□□□ -2.84
snR40snR40 HXT14P42833 540 aa-2.72□□□□□ -2.84
snR40snR40 ABM1P47146 123 aa-2.72□□□□□ -2.84
snR40snR40 PRP3Q03338 469 aaPredicted RBP-2.72□□□□□ -2.84
snR40snR40 UTP14Q04500 899 aaKnown RBP-2.72□□□□□ -2.84
snR40snR40 YLH47Q06493 454 aa-2.72□□□□□ -2.84
snR40snR40 SIP4P46954 829 aa-2.73□□□□□ -2.85
snR40snR40 ALE1Q08548 619 aa-2.73□□□□□ -2.85
snR40snR40 RQC2Q12532 1038 aaKnown RBP-2.73□□□□□ -2.85
snR40snR40 AAC3P18238 307 aa-2.74□□□□□ -2.85
snR40snR40 PRE8P23639 250 aa-2.74□□□□□ -2.85
snR40snR40 ZRT1P32804 376 aa-2.74□□□□□ -2.85
snR40snR40 YIL102CP40488 101 aa-2.74□□□□□ -2.85
snR40snR40 GON7P46984 123 aa-2.74□□□□□ -2.85
snR40snR40 YJR111CP47148 283 aaKnown RBP-2.74□□□□□ -2.85
snR40snR40 TAN1P53072 289 aaPredicted RBP-2.74□□□□□ -2.85
snR40snR40 RRN9P53437 365 aa-2.74□□□□□ -2.85
snR40snR40 YDR541CQ03049 344 aa-2.74□□□□□ -2.85
snR40snR40 GIR2Q03768 265 aaPredicted RBP-2.74□□□□□ -2.85
snR40snR40 YDL144CQ07589 356 aa-2.74□□□□□ -2.85
snR40snR40 YEH1Q07804 573 aa-2.74□□□□□ -2.85
snR40snR40 SCEIP03882 235 aa-2.75□□□□□ -2.85
snR40snR40 RHB1P25378 209 aa-2.75□□□□□ -2.85
snR40snR40 SPL2P38839 148 aa-2.75□□□□□ -2.85
snR40snR40 EDC3P39998 551 aaKnown RBP-2.75□□□□□ -2.85
snR40snR40 SGN1P40561 250 aaKnown RBP RIP-Chip data-2.75□□□□□ -2.85not detected
snR40snR40 SYS1P41544 203 aa-2.75□□□□□ -2.85
snR40snR40 TRM8Q12009 286 aa-2.75□□□□□ -2.85
snR40snR40 YOP1Q12402 180 aa-2.75□□□□□ -2.85
snR40snR40 GCN4P03069 281 aa-2.76□□□□□ -2.85
snR40snR40 PTC1P35182 281 aa-2.76□□□□□ -2.85
snR40snR40 RRP14P36080 434 aaKnown RBP-2.76□□□□□ -2.85
snR40snR40 AGE2P40529 298 aa-2.76□□□□□ -2.85
snR40snR40 SEC27P41811 889 aaKnown RBP-2.76□□□□□ -2.85
snR40snR40 CIK1Q01649 594 aa-2.76□□□□□ -2.85
snR40snR40 YMR130WQ04223 302 aa-2.76□□□□□ -2.85
snR40snR40 PEX12Q04370 399 aa-2.76□□□□□ -2.85
snR40snR40 YMR114CQ04471 368 aaKnown RBP-2.76□□□□□ -2.85
snR40snR40 RNH1Q04740 348 aa-2.76□□□□□ -2.85
snR40snR40 RRG1Q12167 365 aaPredicted RBP-2.76□□□□□ -2.85
snR40snR40 BNI1P41832 1953 aa-2.76□□□□□ -2.85
snR40snR40 RPL43AP0CX25 92 aaKnown RBP-2.77□□□□□ -2.85
snR40snR40 RPL43BP0CX26 92 aa-2.77□□□□□ -2.85
snR40snR40 SUR2P38992 349 aa-2.77□□□□□ -2.85
snR40snR40 YEL057CP39983 233 aa-2.77□□□□□ -2.85
snR40snR40 RPS0BP46654 252 aaKnown RBP-2.77□□□□□ -2.85
snR40snR40 COG7P53195 279 aa-2.77□□□□□ -2.85
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms