RNA–Protein interactions for RNA: snR36

snR36, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR36, Length 182 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR36	snR36	YKL187C	P34231	750 aa		0.69	□□□□□ -2.3
snR36	snR36	SMF2	P38778	549 aa		0.69	□□□□□ -2.3
snR36	snR36	EPL1	P43572	832 aa		0.69	□□□□□ -2.3
snR36	snR36	MRPL20	P22354	195 aa	Predicted RBP	0.68	□□□□□ -2.3
snR36	snR36	DSE1	P40077	573 aa		0.68	□□□□□ -2.3
snR36	snR36	HIT1	P46973	164 aa		0.68	□□□□□ -2.3
snR36	snR36	TPC1	P53257	314 aa		0.68	□□□□□ -2.3
snR36	snR36	IPK1	Q06667	281 aa		0.68	□□□□□ -2.3
snR36	snR36	TRM10	Q12400	293 aa		0.68	□□□□□ -2.3
snR36	snR36	CDC31	P06704	161 aa	Known RBP	0.67	□□□□□ -2.3
snR36	snR36	YOL163W	P0CF20	169 aa		0.67	□□□□□ -2.3
snR36	snR36	EFB1	P32471	206 aa	Known RBP	0.67	□□□□□ -2.3
snR36	snR36	CSE1	P33307	960 aa		0.67	□□□□□ -2.3
snR36	snR36	LTV1	P34078	463 aa		0.67	□□□□□ -2.3
snR36	snR36	CAB3	P36076	571 aa		0.67	□□□□□ -2.3
snR36	snR36	PCH2	P38126	564 aa		0.67	□□□□□ -2.3
snR36	snR36	KAP104	P38217	918 aa	Known RBP	0.67	□□□□□ -2.3
snR36	snR36	SPP381	P38282	291 aa	Predicted RBP	0.67	□□□□□ -2.3
snR36	snR36	SRP72	P38688	640 aa	Known RBP	0.67	□□□□□ -2.3
snR36	snR36	MNL1	P38888	796 aa		0.67	□□□□□ -2.3
snR36	snR36	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.67	□□□□□ -2.3	not detected
snR36	snR36	LYS12	P40495	371 aa	Known RBP	0.67	□□□□□ -2.3
snR36	snR36	YFR054C	P43622	192 aa		0.67	□□□□□ -2.3
snR36	snR36	LSG1	P53145	640 aa	Known RBP	0.67	□□□□□ -2.3
snR36	snR36	RRB1	Q04225	511 aa	Known RBP	0.67	□□□□□ -2.3
snR36	snR36	DCR2	Q05924	578 aa		0.67	□□□□□ -2.3
snR36	snR36	YDL121C	Q07541	149 aa		0.67	□□□□□ -2.3
snR36	snR36	CDC42	P19073	191 aa		0.66	□□□□□ -2.3
snR36	snR36	PRE7	P23724	241 aa	Known RBP	0.66	□□□□□ -2.3
snR36	snR36	FCY21	P40039	528 aa		0.66	□□□□□ -2.3
snR36	snR36	ZIM17	P42844	174 aa		0.66	□□□□□ -2.3
snR36	snR36	SDS23	P53172	527 aa		0.66	□□□□□ -2.3
snR36	snR36	RET3	P53600	189 aa		0.66	□□□□□ -2.3
snR36	snR36	UBX2	Q04228	584 aa		0.66	□□□□□ -2.3
snR36	snR36	YPR078C	Q06813	372 aa		0.66	□□□□□ -2.3
snR36	snR36	YOL075C	Q08234	1294 aa		0.66	□□□□□ -2.3
snR36	snR36	RRG1	Q12167	365 aa	Predicted RBP	0.66	□□□□□ -2.3
snR36	snR36	YOR012W	Q12351	137 aa		0.66	□□□□□ -2.3
snR36	snR36	RPN6	Q12377	434 aa		0.66	□□□□□ -2.3
snR36	snR36	LCP5	P40079	357 aa	Predicted RBP	0.65	□□□□□ -2.31
snR36	snR36	LCB2	P40970	561 aa		0.65	□□□□□ -2.31
snR36	snR36	DSK2	P48510	373 aa		0.65	□□□□□ -2.31
snR36	snR36	UFD1	P53044	361 aa		0.65	□□□□□ -2.31
snR36	snR36	LST7	P53237	242 aa		0.65	□□□□□ -2.31
snR36	snR36	SSU72	P53538	206 aa	Predicted RBP	0.65	□□□□□ -2.31
snR36	snR36	SPH1	Q06160	661 aa		0.65	□□□□□ -2.31
snR36	snR36	DCI1	Q08558	271 aa		0.65	□□□□□ -2.31
snR36	snR36	TIM22	Q12328	207 aa		0.65	□□□□□ -2.31
snR36	snR36	ERP3	Q12403	225 aa		0.65	□□□□□ -2.31
snR36	snR36	YHR086W-A	Q3E746	53 aa		0.65	□□□□□ -2.31
snR36	snR36	RPL26A	P05743	127 aa	Known RBP	0.64	□□□□□ -2.31
snR36	snR36	PDX1	P16451	410 aa		0.64	□□□□□ -2.31
snR36	snR36	MDH1	P17505	334 aa	Known RBP RIP-Chip data	0.64	□□□□□ -2.31	not detected
snR36	snR36	SCO1	P23833	295 aa		0.64	□□□□□ -2.31
snR36	snR36	YNL320W	P42840	284 aa		0.64	□□□□□ -2.31
snR36	snR36	PMT4	P46971	762 aa		0.64	□□□□□ -2.31
snR36	snR36	RPL26B	P53221	127 aa	Known RBP	0.64	□□□□□ -2.31
snR36	snR36	AQR1	P53943	586 aa		0.64	□□□□□ -2.31
snR36	snR36	RPN5	Q12250	445 aa	Known RBP	0.64	□□□□□ -2.31
snR36	snR36	MHP1	P43638	1398 aa		0.63	□□□□□ -2.31
snR36	snR36	RPS16A	P0CX51	143 aa	Known RBP	0.63	□□□□□ -2.31
snR36	snR36	RPS16B	P0CX52	143 aa	Known RBP	0.63	□□□□□ -2.31
snR36	snR36	YAK1	P14680	807 aa		0.63	□□□□□ -2.31
snR36	snR36	ATG7	P38862	630 aa		0.63	□□□□□ -2.31
snR36	snR36	PIR5	P46999	287 aa		0.63	□□□□□ -2.31
snR36	snR36	YJR146W	P47174	117 aa		0.63	□□□□□ -2.31
snR36	snR36	YMR166C	Q03829	368 aa		0.63	□□□□□ -2.31
snR36	snR36	RDS3	Q06835	107 aa	Predicted RBP	0.63	□□□□□ -2.31
snR36	snR36	MIM1	Q08176	113 aa		0.63	□□□□□ -2.31
snR36	snR36	TY3A-G	Q12173	290 aa		0.63	□□□□□ -2.31
snR36	snR36	TY3A-I	Q99219	290 aa		0.63	□□□□□ -2.31
snR36	snR36	RPC53	P25441	422 aa		0.62	□□□□□ -2.31
snR36	snR36	SRN2	Q99176	213 aa		0.62	□□□□□ -2.31
snR36	snR36	HIS3	P06633	220 aa		0.61	□□□□□ -2.31
snR36	snR36	FUR1	P18562	216 aa	Known RBP	0.61	□□□□□ -2.31
snR36	snR36	DBR1	P24309	405 aa	Known RBP	0.61	□□□□□ -2.31
snR36	snR36	MSK1	P32048	576 aa		0.61	□□□□□ -2.31
snR36	snR36	YHL044W	P38727	235 aa		0.61	□□□□□ -2.31
snR36	snR36	MLH1	P38920	769 aa		0.61	□□□□□ -2.31
snR36	snR36	EDC2	P40023	145 aa	Predicted RBP	0.61	□□□□□ -2.31
snR36	snR36	RMT2	Q03305	412 aa		0.6	□□□□□ -2.31
snR36	snR36	CSM3	Q04659	317 aa		0.6	□□□□□ -2.31
snR36	snR36	ZWF1	P11412	505 aa	Known RBP	0.59	□□□□□ -2.31
snR36	snR36	MRPS5	P33759	307 aa		0.59	□□□□□ -2.31
snR36	snR36	YJL027C	P47063	138 aa	Predicted RBP	0.59	□□□□□ -2.31
snR36	snR36	MIG2	P53035	382 aa		0.59	□□□□□ -2.31
snR36	snR36	AIM33	Q04516	312 aa		0.59	□□□□□ -2.31
snR36	snR36	PRR2	Q12310	699 aa		0.59	□□□□□ -2.31
snR36	snR36	ISA2	Q12425	185 aa		0.59	□□□□□ -2.31
snR36	snR36	BUD2	P33314	1104 aa		0.58	□□□□□ -2.32
snR36	snR36	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.58	□□□□□ -2.32	not detected
snR36	snR36	OSH6	Q02201	448 aa		0.58	□□□□□ -2.32
snR36	snR36	SMP3	Q04174	516 aa		0.58	□□□□□ -2.32
snR36	snR36	SUE1	Q06524	206 aa		0.58	□□□□□ -2.32
snR36	snR36	GPM3	Q12326	303 aa		0.58	□□□□□ -2.32
snR36	snR36	PFK27	Q12471	397 aa	Predicted RBP	0.58	□□□□□ -2.32
snR36	snR36	FSH3	Q99369	266 aa		0.58	□□□□□ -2.32
snR36	snR36	CBP2	P03874	630 aa	Predicted RBP	0.57	□□□□□ -2.32
snR36	snR36	RPL1A	P0CX43	217 aa	Known RBP	0.57	□□□□□ -2.32
snR36	snR36	RPL1B	P0CX44	217 aa	Known RBP	0.57	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms