RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR35, Length 204 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR35	snR35	PMT4	P46971	762 aa		2.61	□□□□□ -1.99
snR35	snR35	GTO1	P48239	356 aa		2.61	□□□□□ -1.99
snR35	snR35	YGL039W	P53183	348 aa	Known RBP	2.61	□□□□□ -1.99
snR35	snR35	YNL260C	P53846	198 aa		2.61	□□□□□ -1.99
snR35	snR35	SLT2	Q00772	484 aa		2.61	□□□□□ -1.99
snR35	snR35	LIP2	Q06005	328 aa		2.61	□□□□□ -1.99
snR35	snR35	DTD1	Q07648	150 aa	Known RBP	2.61	□□□□□ -1.99
snR35	snR35	YLR012C	Q07927	99 aa		2.61	□□□□□ -1.99
snR35	snR35	RDL2	Q08742	149 aa	Known RBP	2.61	□□□□□ -1.99
snR35	snR35	SIA1	Q12212	622 aa		2.61	□□□□□ -1.99
snR35	snR35	PRM4	Q12498	284 aa		2.61	□□□□□ -1.99
snR35	snR35	INO80	P53115	1489 aa		2.6	□□□□□ -1.99
snR35	snR35	RAD23	P32628	398 aa	Known RBP	2.6	□□□□□ -1.99
snR35	snR35	SHE1	P38200	338 aa		2.6	□□□□□ -1.99
snR35	snR35	SMF2	P38778	549 aa		2.6	□□□□□ -1.99
snR35	snR35	PET100	P38958	111 aa		2.6	□□□□□ -1.99
snR35	snR35	HEM14	P40012	539 aa		2.6	□□□□□ -1.99
snR35	snR35	ALD5	P40047	520 aa	Known RBP	2.6	□□□□□ -1.99
snR35	snR35	PRE5	P40302	234 aa	Known RBP	2.6	□□□□□ -1.99
snR35	snR35	RPN14	P53196	417 aa		2.6	□□□□□ -1.99
snR35	snR35	BIO4	P53630	237 aa		2.6	□□□□□ -1.99
snR35	snR35	IRC4	Q03036	179 aa		2.6	□□□□□ -1.99
snR35	snR35	FAR10	Q06001	478 aa		2.6	□□□□□ -1.99
snR35	snR35	YLR177W	Q06251	628 aa		2.6	□□□□□ -1.99
snR35	snR35	MHR1	Q06630	226 aa		2.6	□□□□□ -1.99
snR35	snR35	LDB17	Q12342	491 aa		2.6	□□□□□ -1.99
snR35	snR35	MRPL23	Q12487	163 aa	Predicted RBP	2.6	□□□□□ -1.99
snR35	snR35	REP1	P03871	373 aa		2.59	□□□□□ -1.99
snR35	snR35	RAD7	P06779	565 aa		2.59	□□□□□ -1.99
snR35	snR35	SSA3	P09435	649 aa	Known RBP	2.59	□□□□□ -1.99
snR35	snR35	CMK2	P22517	447 aa		2.59	□□□□□ -1.99
snR35	snR35	MEK1	P24719	497 aa	Predicted RBP	2.59	□□□□□ -1.99
snR35	snR35	URA10	P30402	227 aa		2.59	□□□□□ -1.99
snR35	snR35	PDC2	P32896	925 aa		2.59	□□□□□ -1.99
snR35	snR35	ECT1	P33412	323 aa		2.59	□□□□□ -1.99
snR35	snR35	YKL071W	P36086	256 aa		2.59	□□□□□ -1.99
snR35	snR35	YKL070W	P36087	169 aa		2.59	□□□□□ -1.99
snR35	snR35	SHE3	P38272	425 aa	Known RBP	2.59	□□□□□ -1.99
snR35	snR35	EFM1	P38732	585 aa		2.59	□□□□□ -1.99
snR35	snR35	PFS1	P38872	237 aa		2.59	□□□□□ -1.99
snR35	snR35	CHL4	P38907	458 aa		2.59	□□□□□ -1.99
snR35	snR35	IGD1	P43598	195 aa		2.59	□□□□□ -1.99
snR35	snR35	MPP10	P47083	593 aa	Known RBP	2.59	□□□□□ -1.99
snR35	snR35	YJR054W	P47114	497 aa		2.59	□□□□□ -1.99
snR35	snR35	KEL2	P50090	882 aa		2.59	□□□□□ -1.99
snR35	snR35	SEH1	P53011	349 aa	Known RBP	2.59	□□□□□ -1.99
snR35	snR35	MND1	P53102	219 aa		2.59	□□□□□ -1.99
snR35	snR35	YGR015C	P53208	328 aa		2.59	□□□□□ -1.99
snR35	snR35	RNH201	P53942	307 aa		2.59	□□□□□ -1.99
snR35	snR35	MRX9	Q07349	420 aa	Known RBP	2.59	□□□□□ -1.99
snR35	snR35	TAF10	Q12030	206 aa		2.59	□□□□□ -1.99
snR35	snR35	APC9	Q12107	265 aa		2.59	□□□□□ -1.99
snR35	snR35	STE2	D6VTK4	431 aa		2.58	□□□□□ -2
snR35	snR35	SAL1	D6W196	494 aa		2.58	□□□□□ -2
snR35	snR35	REV1	P12689	985 aa		2.58	□□□□□ -2
snR35	snR35	GPI12	P23797	304 aa		2.58	□□□□□ -2
snR35	snR35	ZRT1	P32804	376 aa		2.58	□□□□□ -2
snR35	snR35	KTI12	P34253	313 aa	Known RBP	2.58	□□□□□ -2
snR35	snR35	DTR1	P38125	572 aa		2.58	□□□□□ -2
snR35	snR35	GPI18	P38211	433 aa		2.58	□□□□□ -2
snR35	snR35	CTM1	P38818	585 aa		2.58	□□□□□ -2
snR35	snR35	DSE1	P40077	573 aa		2.58	□□□□□ -2
snR35	snR35	SHE10	P53075	577 aa		2.58	□□□□□ -2
snR35	snR35	YNL050C	P53952	270 aa		2.58	□□□□□ -2
snR35	snR35	YLR152C	P54072	576 aa		2.58	□□□□□ -2
snR35	snR35	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
snR35	snR35	YPL080C	Q02826	108 aa		2.58	□□□□□ -2
snR35	snR35	IZH4	Q99393	312 aa		2.58	□□□□□ -2
snR35	snR35	ATP6	P00854	259 aa		2.57	□□□□□ -2
snR35	snR35	COX4	P04037	155 aa		2.57	□□□□□ -2
snR35	snR35	HPR1	P17629	752 aa	Known RBP	2.57	□□□□□ -2
snR35	snR35	LDB16	P25587	256 aa		2.57	□□□□□ -2
snR35	snR35	SWD2	P36104	329 aa	Predicted RBP	2.57	□□□□□ -2
snR35	snR35	PEX22	P39718	180 aa		2.57	□□□□□ -2
snR35	snR35	EMC2	P47133	292 aa	Known RBP	2.57	□□□□□ -2
snR35	snR35	BIO3	P50277	480 aa		2.57	□□□□□ -2
snR35	snR35	YGL185C	P53100	379 aa		2.57	□□□□□ -2
snR35	snR35	CDH1	P53197	566 aa		2.57	□□□□□ -2
snR35	snR35	SWC4	P53201	476 aa		2.57	□□□□□ -2
snR35	snR35	YGR266W	P53326	701 aa		2.57	□□□□□ -2
snR35	snR35	SCS7	Q03529	384 aa		2.57	□□□□□ -2
snR35	snR35	SNX41	Q04053	625 aa		2.57	□□□□□ -2
snR35	snR35	YMR111C	Q04461	462 aa	Predicted RBP	2.57	□□□□□ -2
snR35	snR35	BER1	Q06688	274 aa	Known RBP	2.57	□□□□□ -2
snR35	snR35	PBP4	Q07362	185 aa	Known RBP	2.57	□□□□□ -2
snR35	snR35	YPQ1	Q12010	308 aa		2.57	□□□□□ -2
snR35	snR35	FMP16	Q12497	93 aa		2.57	□□□□□ -2
snR35	snR35	FOL3	Q12676	427 aa	Predicted RBP	2.57	□□□□□ -2
snR35	snR35	RPS14A	P06367	137 aa	Known RBP	2.56	□□□□□ -2
snR35	snR35	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	not detected
snR35	snR35	IES6	P32617	166 aa		2.56	□□□□□ -2
snR35	snR35	YOX1	P34161	385 aa		2.56	□□□□□ -2
snR35	snR35	YBR241C	P38142	488 aa		2.56	□□□□□ -2
snR35	snR35	RCK1	P38622	512 aa		2.56	□□□□□ -2
snR35	snR35	HIS2	P38635	335 aa		2.56	□□□□□ -2
snR35	snR35	WSC4	P38739	605 aa		2.56	□□□□□ -2
snR35	snR35	RPS14B	P39516	138 aa	Known RBP	2.56	□□□□□ -2
snR35	snR35	SOP4	P39543	234 aa	Predicted RBP	2.56	□□□□□ -2
snR35	snR35	AGP3	P43548	558 aa		2.56	□□□□□ -2
snR35	snR35	YPL077C	Q02831	240 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms