RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W PHO86P46956 311 aa1.5□□□□□ -2.17
CTF4YPR135W JHD2P47156 728 aaPredicted RBP1.5□□□□□ -2.17
CTF4YPR135W TRM9P49957 279 aa1.5□□□□□ -2.17
CTF4YPR135W MAL12P53341 584 aa1.5□□□□□ -2.17
CTF4YPR135W SRL4Q03085 281 aa1.5□□□□□ -2.17
CTF4YPR135W ARO80Q04052 950 aa1.5□□□□□ -2.17
CTF4YPR135W SWF1Q04629 336 aa1.5□□□□□ -2.17
CTF4YPR135W NKP2Q06162 153 aa1.5□□□□□ -2.17
CTF4YPR135W MDM36Q06820 579 aa1.5□□□□□ -2.17
CTF4YPR135W TPO4Q12256 659 aa1.5□□□□□ -2.17
CTF4YPR135W YRM1Q12340 786 aa1.5□□□□□ -2.17
CTF4YPR135W FMP16Q12497 93 aa1.5□□□□□ -2.17
CTF4YPR135W RMD5Q12508 421 aa1.5□□□□□ -2.17
CTF4YPR135W CDC36P06100 191 aaPredicted RBP1.49□□□□□ -2.17
CTF4YPR135W IMA3P0CW40 589 aa1.49□□□□□ -2.17
CTF4YPR135W IMA4P0CW41 589 aa1.49□□□□□ -2.17
CTF4YPR135W MATALPHA2P0CY08 210 aa1.49□□□□□ -2.17
CTF4YPR135W HMLALPHA2P0CY09 210 aa1.49□□□□□ -2.17
CTF4YPR135W DAL2P25335 343 aa1.49□□□□□ -2.17
CTF4YPR135W ZUO1P32527 433 aaKnown RBP1.49□□□□□ -2.17
CTF4YPR135W YKL023WP36103 277 aaKnown RBP1.49□□□□□ -2.17
CTF4YPR135W BNA4P38169 460 aa1.49□□□□□ -2.17
CTF4YPR135W EFM2P38347 419 aa1.49□□□□□ -2.17
CTF4YPR135W YHR045WP38775 560 aa1.49□□□□□ -2.17
CTF4YPR135W ALP1P38971 573 aa1.49□□□□□ -2.17
CTF4YPR135W END3P39013 349 aa1.49□□□□□ -2.17
CTF4YPR135W TDA10P42938 290 aa1.49□□□□□ -2.17
CTF4YPR135W LIA1P47120 325 aaKnown RBP1.49□□□□□ -2.17
CTF4YPR135W LYS20P48570 428 aaKnown RBP1.49□□□□□ -2.17
CTF4YPR135W IDP3P53982 420 aaKnown RBP1.49□□□□□ -2.17
CTF4YPR135W PET117Q02771 107 aa1.49□□□□□ -2.17
CTF4YPR135W SHR3Q02774 210 aa1.49□□□□□ -2.17
CTF4YPR135W THP1Q08231 455 aa1.49□□□□□ -2.17
CTF4YPR135W MCH4Q08268 501 aa1.49□□□□□ -2.17
CTF4YPR135W IMA2Q08295 589 aa1.49□□□□□ -2.17
CTF4YPR135W ATG31Q12421 196 aa1.49□□□□□ -2.17
CTF4YPR135W DCP1Q12517 231 aaPredicted RBP1.49□□□□□ -2.17
CTF4YPR135W BLM10P43583 2143 aa1.49□□□□□ -2.17
CTF4YPR135W MDM35O60200 86 aa1.49□□□□□ -2.17
CTF4YPR135W MES1P00958 751 aaKnown RBP1.49□□□□□ -2.17
CTF4YPR135W OPI3P05375 206 aa1.49□□□□□ -2.17
CTF4YPR135W RNR2P09938 399 aaKnown RBP1.49□□□□□ -2.17
CTF4YPR135W RAP1P11938 827 aa1.49□□□□□ -2.17
CTF4YPR135W SPS100P13130 326 aa1.49□□□□□ -2.17
CTF4YPR135W MAK32P23060 363 aa1.49□□□□□ -2.17
CTF4YPR135W DBR1P24309 405 aaKnown RBP1.49□□□□□ -2.17
CTF4YPR135W CDC39P25655 2108 aaKnown RBP1.49□□□□□ -2.17
CTF4YPR135W SUA5P32579 426 aa1.49□□□□□ -2.17
CTF4YPR135W ECT1P33412 323 aa1.49□□□□□ -2.17
CTF4YPR135W YKR015CP36111 568 aa1.49□□□□□ -2.17
CTF4YPR135W DTR1P38125 572 aa1.49□□□□□ -2.17
CTF4YPR135W RRN10P38204 145 aa1.49□□□□□ -2.17
CTF4YPR135W DBP8P38719 431 aa1.49□□□□□ -2.17
CTF4YPR135W RPH1P39956 796 aa1.49□□□□□ -2.17
CTF4YPR135W EDC3P39998 551 aaKnown RBP1.49□□□□□ -2.17
CTF4YPR135W YER085CP40058 173 aa1.49□□□□□ -2.17
CTF4YPR135W HXT9P40885 567 aa1.49□□□□□ -2.17
CTF4YPR135W IRC7P43623 340 aa1.49□□□□□ -2.17
CTF4YPR135W CPR7P47103 393 aa1.49□□□□□ -2.17
CTF4YPR135W YDL186WP48568 277 aa1.49□□□□□ -2.17
CTF4YPR135W YGL114WP53134 725 aa1.49□□□□□ -2.17
CTF4YPR135W KTR6P54070 446 aa1.49□□□□□ -2.17
CTF4YPR135W ASI1P54074 624 aa1.49□□□□□ -2.17
CTF4YPR135W MRPS17Q03246 237 aaPredicted RBP1.49□□□□□ -2.17
CTF4YPR135W RSN1Q03516 953 aa1.49□□□□□ -2.17
CTF4YPR135W EMI1Q04406 187 aa1.49□□□□□ -2.17
CTF4YPR135W COX20Q04935 205 aa1.49□□□□□ -2.17
CTF4YPR135W ATG26Q06321 1198 aa1.49□□□□□ -2.17
CTF4YPR135W BCP1Q06338 283 aa1.49□□□□□ -2.17
CTF4YPR135W SRN2Q99176 213 aa1.49□□□□□ -2.17
CTF4YPR135W TDH3P00359 332 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
CTF4YPR135W PAB1P04147 577 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
CTF4YPR135W RHO2P06781 192 aa1.48□□□□□ -2.17
CTF4YPR135W YSR3P23501 404 aa1.48□□□□□ -2.17
CTF4YPR135W HXT1P32465 570 aa1.48□□□□□ -2.17
CTF4YPR135W PAD1P33751 242 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
CTF4YPR135W YKL162CP36052 402 aa1.48□□□□□ -2.17
CTF4YPR135W FET3P38993 636 aa1.48□□□□□ -2.17
CTF4YPR135W RCY1P39531 840 aa1.48□□□□□ -2.17
CTF4YPR135W SLM1P40485 686 aa1.48□□□□□ -2.17
CTF4YPR135W YIL060WP40519 144 aa1.48□□□□□ -2.17
CTF4YPR135W YIR014WP40570 242 aa1.48□□□□□ -2.17
CTF4YPR135W CUP9P41817 306 aa1.48□□□□□ -2.17
CTF4YPR135W OTU1P43558 301 aa1.48□□□□□ -2.17
CTF4YPR135W YJL118WP47022 219 aa1.48□□□□□ -2.17
CTF4YPR135W STE24P47154 453 aa1.48□□□□□ -2.17
CTF4YPR135W IMD3P50095 523 aaKnown RBP1.48□□□□□ -2.17
CTF4YPR135W HOP2P53187 214 aa1.48□□□□□ -2.17
CTF4YPR135W VOA1P53262 265 aa1.48□□□□□ -2.17
CTF4YPR135W RTC4P53850 401 aa1.48□□□□□ -2.17
CTF4YPR135W MRS2Q01926 470 aa1.48□□□□□ -2.17
CTF4YPR135W MMT1Q03218 510 aa1.48□□□□□ -2.17
CTF4YPR135W ATC1Q04005 294 aa1.48□□□□□ -2.17
CTF4YPR135W SCW10Q04951 389 aa1.48□□□□□ -2.17
CTF4YPR135W YTH1Q06102 208 aaPredicted RBP1.48□□□□□ -2.17
CTF4YPR135W CTS2Q06350 511 aa1.48□□□□□ -2.17
CTF4YPR135W RDR1Q08904 546 aa1.48□□□□□ -2.17
CTF4YPR135W YDR018CQ12185 396 aa1.48□□□□□ -2.17
CTF4YPR135W CCW14O13547 238 aa1.48□□□□□ -2.17
CTF4YPR135W COX2P00410 251 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms