RNA–Protein interactions for RNA: YPR012W

YPR012W, Transcript of Dubious open reading frame, yeast

Gene YPR012W, Length 255 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR012W	YPR012W	SLM1	P40485	686 aa		0.94	□□□□□ -2.26
YPR012W	YPR012W	DSK2	P48510	373 aa		0.94	□□□□□ -2.26
YPR012W	YPR012W	TAF10	Q12030	206 aa		0.94	□□□□□ -2.26
YPR012W	YPR012W	INH1	P01097	85 aa		0.93	□□□□□ -2.26
YPR012W	YPR012W	CTM1	P38818	585 aa		0.93	□□□□□ -2.26
YPR012W	YPR012W	LYS12	P40495	371 aa	Known RBP	0.93	□□□□□ -2.26
YPR012W	YPR012W	MYO5	Q04439	1219 aa	Known RBP	0.93	□□□□□ -2.26
YPR012W	YPR012W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	0.92	□□□□□ -2.26	not detected
YPR012W	YPR012W	NRG2	P38082	220 aa		0.92	□□□□□ -2.26
YPR012W	YPR012W	DSE1	P40077	573 aa		0.92	□□□□□ -2.26
YPR012W	YPR012W	YFR054C	P43622	192 aa		0.92	□□□□□ -2.26
YPR012W	YPR012W	RMT2	Q03305	412 aa		0.92	□□□□□ -2.26
YPR012W	YPR012W	IPK1	Q06667	281 aa		0.92	□□□□□ -2.26
YPR012W	YPR012W	RDS3	Q06835	107 aa	Predicted RBP	0.92	□□□□□ -2.26
YPR012W	YPR012W	TFC7	Q12415	435 aa		0.92	□□□□□ -2.26
YPR012W	YPR012W	MHP1	P43638	1398 aa		0.92	□□□□□ -2.26
YPR012W	YPR012W	PHO80	P20052	293 aa		0.91	□□□□□ -2.26
YPR012W	YPR012W	VAM7	P32912	316 aa		0.91	□□□□□ -2.26
YPR012W	YPR012W	DAN1	P47178	298 aa		0.91	□□□□□ -2.26
YPR012W	YPR012W	LST7	P53237	242 aa		0.91	□□□□□ -2.26
YPR012W	YPR012W	YNL040W	P53960	456 aa	Predicted RBP	0.91	□□□□□ -2.26
YPR012W	YPR012W	CGI121	Q03705	181 aa	Known RBP	0.91	□□□□□ -2.26
YPR012W	YPR012W	YHR086W-A	Q3E746	53 aa		0.91	□□□□□ -2.26
YPR012W	YPR012W	CDC42	P19073	191 aa		0.9	□□□□□ -2.27
YPR012W	YPR012W	LTV1	P34078	463 aa		0.9	□□□□□ -2.27
YPR012W	YPR012W	SRP72	P38688	640 aa	Known RBP	0.9	□□□□□ -2.27
YPR012W	YPR012W	POP2	P39008	433 aa		0.9	□□□□□ -2.27
YPR012W	YPR012W	SSU72	P53538	206 aa	Predicted RBP	0.9	□□□□□ -2.27
YPR012W	YPR012W	PDX1	P16451	410 aa		0.89	□□□□□ -2.27
YPR012W	YPR012W	FAR1	P21268	830 aa		0.89	□□□□□ -2.27
YPR012W	YPR012W	CLB6	P32943	380 aa		0.89	□□□□□ -2.27
YPR012W	YPR012W	TPC1	P53257	314 aa		0.89	□□□□□ -2.27
YPR012W	YPR012W	DAP2	P18962	818 aa		0.88	□□□□□ -2.27
YPR012W	YPR012W	RPC53	P25441	422 aa		0.88	□□□□□ -2.27
YPR012W	YPR012W	EFB1	P32471	206 aa	Known RBP	0.88	□□□□□ -2.27
YPR012W	YPR012W	CSE1	P33307	960 aa		0.88	□□□□□ -2.27
YPR012W	YPR012W	ATG7	P38862	630 aa		0.88	□□□□□ -2.27
YPR012W	YPR012W	LSG1	P53145	640 aa	Known RBP	0.88	□□□□□ -2.27
YPR012W	YPR012W	UBX2	Q04228	584 aa		0.88	□□□□□ -2.27
YPR012W	YPR012W	GPM3	Q12326	303 aa		0.88	□□□□□ -2.27
YPR012W	YPR012W	PRE7	P23724	241 aa	Known RBP	0.87	□□□□□ -2.27
YPR012W	YPR012W	DBR1	P24309	405 aa	Known RBP	0.87	□□□□□ -2.27
YPR012W	YPR012W	EPL1	P43572	832 aa		0.87	□□□□□ -2.27
YPR012W	YPR012W	ACT1	P60010	375 aa	Known RBP	0.87	□□□□□ -2.27
YPR012W	YPR012W	RPN6	Q12377	434 aa		0.87	□□□□□ -2.27
YPR012W	YPR012W	ISA2	Q12425	185 aa		0.87	□□□□□ -2.27
YPR012W	YPR012W	TFS1	P14306	219 aa		0.86	□□□□□ -2.27
YPR012W	YPR012W	YAK1	P14680	807 aa		0.86	□□□□□ -2.27
YPR012W	YPR012W	CAB3	P36076	571 aa		0.86	□□□□□ -2.27
YPR012W	YPR012W	SDS23	P53172	527 aa		0.86	□□□□□ -2.27
YPR012W	YPR012W	RET3	P53600	189 aa		0.86	□□□□□ -2.27
YPR012W	YPR012W	AQR1	P53943	586 aa		0.86	□□□□□ -2.27
YPR012W	YPR012W	AIM33	Q04516	312 aa		0.86	□□□□□ -2.27
YPR012W	YPR012W	TRM10	Q12400	293 aa		0.86	□□□□□ -2.27
YPR012W	YPR012W	YOL163W	P0CF20	169 aa		0.85	□□□□□ -2.27
YPR012W	YPR012W	MSK1	P32048	576 aa		0.85	□□□□□ -2.27
YPR012W	YPR012W	YKL187C	P34231	750 aa		0.85	□□□□□ -2.27
YPR012W	YPR012W	YMR166C	Q03829	368 aa		0.85	□□□□□ -2.27
YPR012W	YPR012W	VPS68	Q12016	184 aa		0.85	□□□□□ -2.27
YPR012W	YPR012W	TIM22	Q12328	207 aa		0.85	□□□□□ -2.27
YPR012W	YPR012W	ERP3	Q12403	225 aa		0.85	□□□□□ -2.27
YPR012W	YPR012W	RPN12	P32496	274 aa		0.84	□□□□□ -2.27
YPR012W	YPR012W	EDC2	P40023	145 aa	Predicted RBP	0.84	□□□□□ -2.27
YPR012W	YPR012W	SNL1	P40548	159 aa		0.84	□□□□□ -2.27
YPR012W	YPR012W	PMT4	P46971	762 aa		0.84	□□□□□ -2.27
YPR012W	YPR012W	PIR5	P46999	287 aa		0.84	□□□□□ -2.27
YPR012W	YPR012W	YPR078C	Q06813	372 aa		0.84	□□□□□ -2.27
YPR012W	YPR012W	TY3A-G	Q12173	290 aa		0.84	□□□□□ -2.27
YPR012W	YPR012W	SRN2	Q99176	213 aa		0.84	□□□□□ -2.27
YPR012W	YPR012W	TY3A-I	Q99219	290 aa		0.84	□□□□□ -2.27
YPR012W	YPR012W	CSM3	Q04659	317 aa		0.83	□□□□□ -2.28
YPR012W	YPR012W	SUE1	Q06524	206 aa		0.83	□□□□□ -2.28
YPR012W	YPR012W	MIM1	Q08176	113 aa		0.83	□□□□□ -2.28
YPR012W	YPR012W	YOR012W	Q12351	137 aa		0.83	□□□□□ -2.28
YPR012W	YPR012W	CBP2	P03874	630 aa	Predicted RBP	0.82	□□□□□ -2.28
YPR012W	YPR012W	SMP3	Q04174	516 aa		0.82	□□□□□ -2.28
YPR012W	YPR012W	PEX27	Q08580	376 aa		0.82	□□□□□ -2.28
YPR012W	YPR012W	FSH3	Q99369	266 aa		0.82	□□□□□ -2.28
YPR012W	YPR012W	RPS16A	P0CX51	143 aa	Known RBP	0.81	□□□□□ -2.28
YPR012W	YPR012W	RPS16B	P0CX52	143 aa	Known RBP	0.81	□□□□□ -2.28
YPR012W	YPR012W	LCP5	P40079	357 aa	Predicted RBP	0.81	□□□□□ -2.28
YPR012W	YPR012W	UFD1	P53044	361 aa		0.81	□□□□□ -2.28
YPR012W	YPR012W	SPH1	Q06160	661 aa		0.81	□□□□□ -2.28
YPR012W	YPR012W	DCP1	Q12517	231 aa	Predicted RBP	0.81	□□□□□ -2.28
YPR012W	YPR012W	PSO2	P30620	661 aa		0.8	□□□□□ -2.28
YPR012W	YPR012W	MRPS5	P33759	307 aa		0.8	□□□□□ -2.28
YPR012W	YPR012W	MLH1	P38920	769 aa		0.8	□□□□□ -2.28
YPR012W	YPR012W	MIG2	P53035	382 aa		0.8	□□□□□ -2.28
YPR012W	YPR012W	VPS1	P21576	704 aa	Known RBP	0.79	□□□□□ -2.28
YPR012W	YPR012W	KTI12	P34253	313 aa	Known RBP	0.79	□□□□□ -2.28
YPR012W	YPR012W	LSM4	P40070	187 aa	Known RBP	0.79	□□□□□ -2.28
YPR012W	YPR012W	SRB7	P47822	140 aa		0.79	□□□□□ -2.28
YPR012W	YPR012W	RPL1A	P0CX43	217 aa	Known RBP	0.78	□□□□□ -2.28
YPR012W	YPR012W	RPL1B	P0CX44	217 aa	Known RBP	0.78	□□□□□ -2.28
YPR012W	YPR012W	ARF2	P19146	181 aa	Known RBP	0.78	□□□□□ -2.28
YPR012W	YPR012W	SCO1	P23833	295 aa		0.78	□□□□□ -2.28
YPR012W	YPR012W	RRT12	P25381	491 aa		0.78	□□□□□ -2.28
YPR012W	YPR012W	MPE1	P35728	441 aa	Known RBP	0.78	□□□□□ -2.28
YPR012W	YPR012W	YJR146W	P47174	117 aa		0.78	□□□□□ -2.28
YPR012W	YPR012W	GYL1	Q04322	720 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 1117.4 ms