RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM44	YPL030W	PCC1	Q3E833	88 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	SPO14	P36126	1683 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	RPL9A	P05738	191 aa	Known RBP	4.18	□□□□□ -1.74
TRM44	YPL030W	RPS28B	P0C0X0	67 aa	Known RBP	4.18	□□□□□ -1.74
TRM44	YPL030W	DAT1	P13483	248 aa	Known RBP	4.18	□□□□□ -1.74
TRM44	YPL030W	ZRC1	P20107	442 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	PBN1	P25580	416 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	VBA3	P25594	458 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	BUB3	P26449	341 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	ARO2	P28777	376 aa	Known RBP	4.18	□□□□□ -1.74
TRM44	YPL030W	SNC1	P31109	117 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	MSK1	P32048	576 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	FRE1	P32791	686 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	DRE2	P36152	348 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	YBL086C	P38177	466 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	YBR197C	P38306	217 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	HIS2	P38635	335 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	PRS3	P38689	320 aa	Known RBP	4.18	□□□□□ -1.74
TRM44	YPL030W	EFM1	P38732	585 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	SHU2	P38957	223 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	YIL024C	P40543	189 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	RMD8	P43620	662 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	PET130	P47065	347 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	RPL9B	P51401	191 aa	Known RBP	4.18	□□□□□ -1.74
TRM44	YPL030W	FLC3	P53121	802 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	YGL138C	P53122	345 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	APS2	Q00381	147 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	NUP49	Q02199	472 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	NAT4	Q04751	285 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	RRP45	Q05636	305 aa	Known RBP	4.18	□□□□□ -1.74
TRM44	YPL030W	YHC1	Q05900	231 aa	Known RBP	4.18	□□□□□ -1.74
TRM44	YPL030W	YLR224W	Q05947	369 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	YLR225C	Q05948	407 aa	Known RBP	4.18	□□□□□ -1.74
TRM44	YPL030W	CNL1	Q06333	122 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	SSK1	Q07084	712 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	SPO75	Q07798	868 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	BSC6	Q08280	497 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	PRM4	Q12498	284 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.18	□□□□□ -1.74
TRM44	YPL030W	DNF3	Q12674	1656 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	PHO2	P07269	559 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	YFL068W	P0CX99	160 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	YLL066W-A	P0CY00	160 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	YLL067W-A	P0CY01	160 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	ERG11	P10614	530 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	REV1	P12689	985 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	PET18	P25362	215 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	CAP1	P28495	268 aa	Known RBP	4.18	□□□□□ -1.74
TRM44	YPL030W	MET22	P32179	357 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	ERG3	P32353	365 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	AEP1	P32493	518 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	YKU70	P32807	602 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	TCD2	P36101	447 aa	Known RBP	4.18	□□□□□ -1.74
TRM44	YPL030W	YBR013C	P38215	129 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	YPC1	P38298	316 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	ARP1	P38696	384 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	HEM14	P40012	539 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	NTA1	P40354	457 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	POG1	P40473	351 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	SPG5	P42933	373 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	AIM22	P47051	409 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	YJR012C	P47087	207 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	NUP57	P48837	541 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	ASN2	P49090	572 aa	Known RBP	4.18	□□□□□ -1.74
TRM44	YPL030W	NPY1	P53164	384 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	YGR126W	P53274	230 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	SKO1	Q02100	647 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	YMR209C	Q03648	457 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	YDR444W	Q04093	687 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	FSF1	Q12029	327 aa	Known RBP	4.18	□□□□□ -1.74
TRM44	YPL030W	SLF1	Q12034	447 aa	Known RBP	4.18	□□□□□ -1.74
TRM44	YPL030W	TMS1	Q12116	473 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	PER33	Q12144	273 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	LCB4	Q12246	624 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	RIB3	Q99258	208 aa		4.18	□□□□□ -1.74
TRM44	YPL030W	AI1	P03875	834 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	RHO2	P06781	192 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	PHO4	P07270	312 aa	Known RBP	4.17	□□□□□ -1.74
TRM44	YPL030W	YBR121C-A	P0C5L4	52 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	EST1	P17214	699 aa	Predicted RBP	4.17	□□□□□ -1.74
TRM44	YPL030W	RPL24B	P24000	155 aa	Known RBP	4.17	□□□□□ -1.74
TRM44	YPL030W	MDL2	P33311	773 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	SPC29	P33419	253 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	YKR075C	P36155	307 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	FLR1	P38124	548 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	GPX2	P38143	162 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	YHR035W	P38769	630 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	YHR097C	P38809	366 aa	Known RBP	4.17	□□□□□ -1.74
TRM44	YPL030W	YHR127W	P38833	243 aa	Known RBP	4.17	□□□□□ -1.74
TRM44	YPL030W	YEL020C	P39994	560 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	COG3	P40094	801 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	GAT2	P40209	560 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	IKS1	P47042	667 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	YJR115W	P47152	169 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	DAN1	P47178	298 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	YGL235W	P53071	178 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	YGR250C	P53316	781 aa	Known RBP	4.17	□□□□□ -1.74
TRM44	YPL030W	MPA43	P53583	542 aa	Predicted RBP	4.17	□□□□□ -1.74
TRM44	YPL030W	YAT1	P80235	687 aa		4.17	□□□□□ -1.74
TRM44	YPL030W	TIM10	P87108	93 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms