RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W PEX27Q08580 376 aa3.15□□□□□ -1.9
VPS17YOR132W ABP140Q08641 628 aaKnown RBP3.15□□□□□ -1.9
VPS17YOR132W PAA1Q12447 191 aaKnown RBP3.15□□□□□ -1.9
VPS17YOR132W RMD5Q12508 421 aa3.15□□□□□ -1.9
VPS17YOR132W SET6Q12529 373 aa3.15□□□□□ -1.9
VPS17YOR132W CDC21P06785 304 aa3.14□□□□□ -1.91
VPS17YOR132W GDH1P07262 454 aaKnown RBP3.14□□□□□ -1.91
VPS17YOR132W SSC1P0CS90 654 aaKnown RBP3.14□□□□□ -1.91
VPS17YOR132W RPL4AP10664 362 aaKnown RBP3.14□□□□□ -1.91
VPS17YOR132W AMD1P15274 810 aaKnown RBP3.14□□□□□ -1.91
VPS17YOR132W DAL81P21657 970 aa3.14□□□□□ -1.91
VPS17YOR132W ECT1P33412 323 aa3.14□□□□□ -1.91
VPS17YOR132W DBP7P36120 742 aaKnown RBP3.14□□□□□ -1.91
VPS17YOR132W TVP38P36164 337 aa3.14□□□□□ -1.91
VPS17YOR132W IML3P38265 245 aa3.14□□□□□ -1.91
VPS17YOR132W YHR122WP38829 231 aa3.14□□□□□ -1.91
VPS17YOR132W RPH1P39956 796 aa3.14□□□□□ -1.91
VPS17YOR132W GAT2P40209 560 aa3.14□□□□□ -1.91
VPS17YOR132W YIL001WP40560 513 aa3.14□□□□□ -1.91
VPS17YOR132W YJL213WP40896 331 aa3.14□□□□□ -1.91
VPS17YOR132W OTU1P43558 301 aa3.14□□□□□ -1.91
VPS17YOR132W BNA6P43619 295 aa3.14□□□□□ -1.91
VPS17YOR132W RPL4BP49626 362 aaKnown RBP3.14□□□□□ -1.91
VPS17YOR132W USE1P53146 245 aa3.14□□□□□ -1.91
VPS17YOR132W BIO4P53630 237 aa3.14□□□□□ -1.91
VPS17YOR132W REX2P54964 269 aaKnown RBP3.14□□□□□ -1.91
VPS17YOR132W OSH6Q02201 448 aa3.14□□□□□ -1.91
VPS17YOR132W ELP3Q02908 557 aaKnown RBP3.14□□□□□ -1.91
VPS17YOR132W FMN1Q03778 218 aa3.14□□□□□ -1.91
VPS17YOR132W PRM6Q04705 352 aa3.14□□□□□ -1.91
VPS17YOR132W YMR321CQ04898 105 aa3.14□□□□□ -1.91
VPS17YOR132W BNA5Q05979 453 aa3.14□□□□□ -1.91
VPS17YOR132W NSE1Q07913 336 aa3.14□□□□□ -1.91
VPS17YOR132W SMC5Q08204 1093 aa3.14□□□□□ -1.91
VPS17YOR132W THP1Q08231 455 aa3.14□□□□□ -1.91
VPS17YOR132W YLR053CQ12026 108 aa3.14□□□□□ -1.91
VPS17YOR132W YDL009CQ12210 107 aa3.14□□□□□ -1.91
VPS17YOR132W RRP12Q12754 1228 aaKnown RBP3.14□□□□□ -1.91
VPS17YOR132W RAD52P06778 471 aaKnown RBP3.14□□□□□ -1.91
VPS17YOR132W FUS3P16892 353 aaKnown RBP3.14□□□□□ -1.91
VPS17YOR132W RPI1P23250 407 aaKnown RBP3.14□□□□□ -1.91
VPS17YOR132W YCR007CP25354 239 aa3.14□□□□□ -1.91
VPS17YOR132W CPR3P25719 182 aa3.14□□□□□ -1.91
VPS17YOR132W PRP21P32524 280 aaPredicted RBP3.14□□□□□ -1.91
VPS17YOR132W ETR1P38071 380 aa3.14□□□□□ -1.91
VPS17YOR132W TCM62P38228 572 aaKnown RBP3.14□□□□□ -1.91
VPS17YOR132W INM1P38710 295 aa3.14□□□□□ -1.91
VPS17YOR132W KRE9P39005 276 aa3.14□□□□□ -1.91
VPS17YOR132W PRP39P39682 629 aaKnown RBP3.14□□□□□ -1.91
VPS17YOR132W RPR2P40571 144 aa3.14□□□□□ -1.91
VPS17YOR132W PAC11P40960 533 aa3.14□□□□□ -1.91
VPS17YOR132W SNZ3P43545 298 aa3.14□□□□□ -1.91
VPS17YOR132W SCD6P45978 349 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91 RIP-Chip
VPS17YOR132W YDL186WP48568 277 aa3.14□□□□□ -1.91
VPS17YOR132W COS10P52924 374 aa3.14□□□□□ -1.91
VPS17YOR132W SNZ2P53824 298 aa3.14□□□□□ -1.91
VPS17YOR132W YNL260CP53846 198 aa3.14□□□□□ -1.91
VPS17YOR132W SLD5Q03406 294 aa3.14□□□□□ -1.91
VPS17YOR132W RSN1Q03516 953 aa3.14□□□□□ -1.91
VPS17YOR132W TAF12Q03761 539 aa3.14□□□□□ -1.91
VPS17YOR132W CTS2Q06350 511 aa3.14□□□□□ -1.91
VPS17YOR132W GPN3Q06543 272 aa3.14□□□□□ -1.91
VPS17YOR132W YET3Q07451 203 aa3.14□□□□□ -1.91
VPS17YOR132W SHS1Q07657 551 aa3.14□□□□□ -1.91
VPS17YOR132W BSC6Q08280 497 aa3.14□□□□□ -1.91
VPS17YOR132W YDR262WQ12331 272 aa3.14□□□□□ -1.91
VPS17YOR132W EMP46Q12396 444 aa3.14□□□□□ -1.91
VPS17YOR132W OCA6Q12454 224 aa3.14□□□□□ -1.91
VPS17YOR132W AIM45Q12480 344 aaKnown RBP3.14□□□□□ -1.91
VPS17YOR132W RPL24AP04449 155 aaKnown RBP3.13□□□□□ -1.91
VPS17YOR132W MRPS28P21771 286 aa3.13□□□□□ -1.91
VPS17YOR132W SLY1P22213 666 aa3.13□□□□□ -1.91
VPS17YOR132W MEI4P29467 408 aa3.13□□□□□ -1.91
VPS17YOR132W ATP11P32453 318 aa3.13□□□□□ -1.91
VPS17YOR132W ECM4P36156 370 aa3.13□□□□□ -1.91
VPS17YOR132W SLX1P38324 304 aa3.13□□□□□ -1.91
VPS17YOR132W MTC4P38335 694 aaKnown RBP3.13□□□□□ -1.91
VPS17YOR132W PCF11P39081 626 aaPredicted RBP3.13□□□□□ -1.91
VPS17YOR132W FMC1P40491 155 aa3.13□□□□□ -1.91
VPS17YOR132W SAS2P40963 338 aa3.13□□□□□ -1.91
VPS17YOR132W FMP33P46998 180 aa3.13□□□□□ -1.91
VPS17YOR132W YJL118WP47022 219 aa3.13□□□□□ -1.91
VPS17YOR132W GIS2P53849 153 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
VPS17YOR132W RLI1Q03195 608 aaKnown RBP3.13□□□□□ -1.91
VPS17YOR132W GTO3Q04806 366 aa3.13□□□□□ -1.91
VPS17YOR132W COX20Q04935 205 aa3.13□□□□□ -1.91
VPS17YOR132W MRPL51Q06090 140 aaPredicted RBP3.13□□□□□ -1.91
VPS17YOR132W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
VPS17YOR132W NOT5Q12514 560 aaPredicted RBP3.13□□□□□ -1.91
VPS17YOR132W MOT1P32333 1867 aa3.13□□□□□ -1.91
VPS17YOR132W SUC2P00724 532 aa3.12□□□□□ -1.91
VPS17YOR132W COX4P04037 155 aa3.12□□□□□ -1.91
VPS17YOR132W CHS1P08004 1131 aa3.12□□□□□ -1.91
VPS17YOR132W MSF1P08425 469 aa3.12□□□□□ -1.91
VPS17YOR132W IMA3P0CW40 589 aa3.12□□□□□ -1.91
VPS17YOR132W IMA4P0CW41 589 aa3.12□□□□□ -1.91
VPS17YOR132W RPL20AP0CX23 172 aaKnown RBP3.12□□□□□ -1.91
VPS17YOR132W RPL20BP0CX24 172 aaPredicted RBP3.12□□□□□ -1.91
VPS17YOR132W RPL18AP0CX49 186 aaKnown RBP3.12□□□□□ -1.91
VPS17YOR132W RPL18BP0CX50 186 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms