RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W PLM2Q04383 521 aa5.55□□□□□ -1.52
CAF40YNL288W RSA1Q08932 381 aa5.55□□□□□ -1.52
CAF40YNL288W MDM32Q12171 622 aa5.55□□□□□ -1.52
CAF40YNL288W YOR342CQ12182 319 aa5.55□□□□□ -1.52
CAF40YNL288W RPL7BQ12213 244 aaKnown RBP5.55□□□□□ -1.52
CAF40YNL288W NCP1P16603 691 aaKnown RBP5.54□□□□□ -1.52
CAF40YNL288W YCK1P23291 538 aa5.54□□□□□ -1.52
CAF40YNL288W ERG8P24521 451 aa5.54□□□□□ -1.52
CAF40YNL288W RRP7P25368 297 aaPredicted RBP5.54□□□□□ -1.52
CAF40YNL288W ADH7P25377 361 aa5.54□□□□□ -1.52
CAF40YNL288W ITR2P30606 609 aa5.54□□□□□ -1.52
CAF40YNL288W PUP2P32379 260 aa5.54□□□□□ -1.52
CAF40YNL288W GSH1P32477 678 aa5.54□□□□□ -1.52
CAF40YNL288W HIR2P32480 875 aa5.54□□□□□ -1.52
CAF40YNL288W TPO5P36029 618 aa5.54□□□□□ -1.52
CAF40YNL288W MOH1P38191 138 aa5.54□□□□□ -1.52
CAF40YNL288W YJL193WP39542 402 aa5.54□□□□□ -1.52
CAF40YNL288W SPO73P40031 143 aa5.54□□□□□ -1.52
CAF40YNL288W CAK1P43568 368 aaPredicted RBP5.54□□□□□ -1.52
CAF40YNL288W VMA10P48836 114 aaKnown RBP5.54□□□□□ -1.52
CAF40YNL288W TOS2P50078 622 aa5.54□□□□□ -1.52
CAF40YNL288W YGL260WP53056 76 aa5.54□□□□□ -1.52
CAF40YNL288W SYF2P53277 215 aaPredicted RBP5.54□□□□□ -1.52
CAF40YNL288W ASI2P53895 289 aa5.54□□□□□ -1.52
CAF40YNL288W SWA2Q06677 668 aa5.54□□□□□ -1.52
CAF40YNL288W VPS36Q06696 566 aa5.54□□□□□ -1.52
CAF40YNL288W BRX1Q08235 291 aaKnown RBP5.54□□□□□ -1.52
CAF40YNL288W APC2Q12440 853 aa5.54□□□□□ -1.52
CAF40YNL288W IPP1P00817 287 aaKnown RBP5.53□□□□□ -1.52
CAF40YNL288W ADE5,7P07244 802 aaKnown RBP5.53□□□□□ -1.52
CAF40YNL288W ATR1P13090 542 aa5.53□□□□□ -1.52
CAF40YNL288W SAC1P32368 623 aaKnown RBP5.53□□□□□ -1.52
CAF40YNL288W HSP150P32478 413 aa5.53□□□□□ -1.52
CAF40YNL288W HIS7P33734 552 aaKnown RBP5.53□□□□□ -1.52
CAF40YNL288W ECM15P35195 104 aa5.53□□□□□ -1.52
CAF40YNL288W DHR2P36009 735 aaPredicted RBP5.53□□□□□ -1.52
CAF40YNL288W SLM4P38247 162 aa5.53□□□□□ -1.52
CAF40YNL288W GRE3P38715 327 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
CAF40YNL288W PEX18P38855 283 aa5.53□□□□□ -1.52
CAF40YNL288W YEL068CP39977 110 aa5.53□□□□□ -1.52
CAF40YNL288W GCN20P43535 752 aaKnown RBP5.53□□□□□ -1.52
CAF40YNL288W ECO1P43605 281 aa5.53□□□□□ -1.52
CAF40YNL288W BAT2P47176 376 aaKnown RBP5.53□□□□□ -1.52
CAF40YNL288W PRM8P53174 237 aa5.53□□□□□ -1.52
CAF40YNL288W MEP3P53390 489 aa5.53□□□□□ -1.52
CAF40YNL288W YSA1Q01976 231 aa5.53□□□□□ -1.52
CAF40YNL288W YKR011CQ02209 353 aa5.53□□□□□ -1.52
CAF40YNL288W RSN1Q03516 953 aa5.53□□□□□ -1.52
CAF40YNL288W YDR249CQ03787 373 aa5.53□□□□□ -1.52
CAF40YNL288W SEC13Q04491 297 aaKnown RBP5.53□□□□□ -1.52
CAF40YNL288W YMR226CQ05016 267 aaKnown RBP5.53□□□□□ -1.52
CAF40YNL288W BUR2Q05949 395 aa5.53□□□□□ -1.52
CAF40YNL288W DTD1Q07648 150 aaKnown RBP5.53□□□□□ -1.52
CAF40YNL288W ENB1Q08299 606 aa5.53□□□□□ -1.52
CAF40YNL288W HNT3Q08702 217 aa5.53□□□□□ -1.52
CAF40YNL288W NFI1Q12216 726 aa5.53□□□□□ -1.52
CAF40YNL288W NPC2Q12408 173 aa5.53□□□□□ -1.52
CAF40YNL288W MTR10Q99189 972 aa5.53□□□□□ -1.52
CAF40YNL288W DET1Q99288 334 aaKnown RBP5.53□□□□□ -1.52
CAF40YNL288W CDC9P04819 755 aa5.52□□□□□ -1.53
CAF40YNL288W ERD2P18414 219 aa5.52□□□□□ -1.53
CAF40YNL288W RAD51P25454 400 aa5.52□□□□□ -1.53
CAF40YNL288W POL4P25615 582 aa5.52□□□□□ -1.53
CAF40YNL288W UBC8P28263 218 aa5.52□□□□□ -1.53
CAF40YNL288W HBS1P32769 611 aaKnown RBP5.52□□□□□ -1.53
CAF40YNL288W ALP1P38971 573 aa5.52□□□□□ -1.53
CAF40YNL288W RPE1P46969 238 aa5.52□□□□□ -1.53
CAF40YNL288W PGU1P47180 361 aa5.52□□□□□ -1.53
CAF40YNL288W ATG4P53867 494 aa5.52□□□□□ -1.53
CAF40YNL288W EKI1Q03764 534 aa5.52□□□□□ -1.53
CAF40YNL288W SYO1Q07395 620 aa5.52□□□□□ -1.53
CAF40YNL288W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
CAF40YNL288W CRT10Q08226 957 aa5.52□□□□□ -1.53
CAF40YNL288W SKI7Q08491 747 aaPredicted RBP5.52□□□□□ -1.53
CAF40YNL288W RRG7Q08774 242 aaPredicted RBP5.52□□□□□ -1.53
CAF40YNL288W RDR1Q08904 546 aa5.52□□□□□ -1.53
CAF40YNL288W YPL272CQ08984 517 aa5.52□□□□□ -1.53
CAF40YNL288W MCP1Q12106 302 aa5.52□□□□□ -1.53
CAF40YNL288W RIB3Q99258 208 aa5.52□□□□□ -1.53
CAF40YNL288W SIR3P06701 978 aa5.51□□□□□ -1.53
CAF40YNL288W YFR010W-AP0C5N0 62 aa5.51□□□□□ -1.53
CAF40YNL288W YHR214C-DP0CX93 97 aa5.51□□□□□ -1.53
CAF40YNL288W FAR1P21268 830 aa5.51□□□□□ -1.53
CAF40YNL288W BUD5P25300 642 aaPredicted RBP5.51□□□□□ -1.53
CAF40YNL288W SNC1P31109 117 aa5.51□□□□□ -1.53
CAF40YNL288W MTC4P38335 694 aaKnown RBP5.51□□□□□ -1.53
CAF40YNL288W RRP4P38792 359 aaKnown RBP5.51□□□□□ -1.53
CAF40YNL288W ECM1P39715 212 aa5.51□□□□□ -1.53
CAF40YNL288W SIT1P39980 628 aa5.51□□□□□ -1.53
CAF40YNL288W YNL195CP40168 261 aa5.51□□□□□ -1.53
CAF40YNL288W PRE6P40303 254 aaKnown RBP5.51□□□□□ -1.53
CAF40YNL288W YIL166CP40445 542 aa5.51□□□□□ -1.53
CAF40YNL288W HXT9P40885 567 aa5.51□□□□□ -1.53
CAF40YNL288W CHA4P43634 648 aa5.51□□□□□ -1.53
CAF40YNL288W IDS2P46958 469 aa5.51□□□□□ -1.53
CAF40YNL288W DAM1P53267 343 aa5.51□□□□□ -1.53
CAF40YNL288W HXT11P54862 567 aa5.51□□□□□ -1.53
CAF40YNL288W MIX14Q04341 121 aa5.51□□□□□ -1.53
CAF40YNL288W LOT6Q07923 191 aa5.51□□□□□ -1.53
CAF40YNL288W YDL109CQ12103 647 aa5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms