RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C PFK27Q12471 397 aaPredicted RBP4.21□□□□□ -1.74
CCS1YMR038C RRP36Q12481 300 aaPredicted RBP4.21□□□□□ -1.74
CCS1YMR038C SFG1Q12507 346 aa4.21□□□□□ -1.74
CCS1YMR038C Q0144Q9ZZW2 109 aa4.21□□□□□ -1.74
CCS1YMR038C HSC82P15108 705 aaKnown RBP4.2□□□□□ -1.74
CCS1YMR038C RPO26P20435 155 aa4.2□□□□□ -1.74
CCS1YMR038C MSN2P33748 704 aa4.2□□□□□ -1.74
CCS1YMR038C MTR2P34232 184 aaKnown RBP4.2□□□□□ -1.74
CCS1YMR038C TUL1P36096 758 aa4.2□□□□□ -1.74
CCS1YMR038C YCR087C-AP37263 153 aa4.2□□□□□ -1.74
CCS1YMR038C HSM3P38348 480 aa4.2□□□□□ -1.74
CCS1YMR038C SEC31P38968 1273 aaKnown RBP4.2□□□□□ -1.74
CCS1YMR038C YMR144WP40214 342 aaKnown RBP4.2□□□□□ -1.74
CCS1YMR038C RIC1P40395 1056 aa4.2□□□□□ -1.74
CCS1YMR038C SLM2P53955 656 aa4.2□□□□□ -1.74
CCS1YMR038C RHO4Q00246 291 aa4.2□□□□□ -1.74
CCS1YMR038C SNO4Q04902 237 aa4.2□□□□□ -1.74
CCS1YMR038C YLR446WQ06204 433 aa4.2□□□□□ -1.74
CCS1YMR038C YOL019WQ08157 551 aa4.2□□□□□ -1.74
CCS1YMR038C GPN2Q08726 347 aaPredicted RBP4.2□□□□□ -1.74
CCS1YMR038C FRE3Q08905 711 aa4.2□□□□□ -1.74
CCS1YMR038C HSP33Q08914 237 aaKnown RBP4.2□□□□□ -1.74
CCS1YMR038C HSP32Q08992 237 aa4.2□□□□□ -1.74
CCS1YMR038C YDL211CQ12121 372 aa4.2□□□□□ -1.74
CCS1YMR038C ERG27Q12452 347 aaKnown RBP4.2□□□□□ -1.74
CCS1YMR038C YLR302CO13544 120 aa4.19□□□□□ -1.74
CCS1YMR038C CDC36P06100 191 aaPredicted RBP4.19□□□□□ -1.74
CCS1YMR038C MET2P08465 486 aa4.19□□□□□ -1.74
CCS1YMR038C MCK1P21965 375 aaKnown RBP4.19□□□□□ -1.74
CCS1YMR038C HSP150P32478 413 aa4.19□□□□□ -1.74
CCS1YMR038C SSO1P32867 290 aa4.19□□□□□ -1.74
CCS1YMR038C VPS51P36116 164 aa4.19□□□□□ -1.74
CCS1YMR038C TRR2P38816 342 aa4.19□□□□□ -1.74
CCS1YMR038C FAD1P38913 306 aa4.19□□□□□ -1.74
CCS1YMR038C ECM10P39987 644 aa4.19□□□□□ -1.74
CCS1YMR038C PKP1P40530 394 aa4.19□□□□□ -1.74
CCS1YMR038C SNM1P40993 198 aa4.19□□□□□ -1.74
CCS1YMR038C LIA1P47120 325 aaKnown RBP4.19□□□□□ -1.74
CCS1YMR038C HOS2P53096 452 aaPredicted RBP4.19□□□□□ -1.74
CCS1YMR038C NOP19P53317 196 aaPredicted RBP4.19□□□□□ -1.74
CCS1YMR038C SCW4P53334 386 aaKnown RBP4.19□□□□□ -1.74
CCS1YMR038C PFA5Q03289 374 aa4.19□□□□□ -1.74
CCS1YMR038C VPS60Q03390 229 aa4.19□□□□□ -1.74
CCS1YMR038C RSM28Q03430 361 aa4.19□□□□□ -1.74
CCS1YMR038C YDR124WQ04608 324 aa4.19□□□□□ -1.74
CCS1YMR038C YLL007CQ07799 665 aa4.19□□□□□ -1.74
CCS1YMR038C YEH1Q07804 573 aa4.19□□□□□ -1.74
CCS1YMR038C YOR365CQ08844 703 aa4.19□□□□□ -1.74
CCS1YMR038C GET4Q12125 312 aa4.19□□□□□ -1.74
CCS1YMR038C NCE102Q12207 173 aaRIP-Chip data4.19□□□□□ -1.74not detected
CCS1YMR038C SKS1Q12505 502 aa4.19□□□□□ -1.74
CCS1YMR038C MTR10Q99189 972 aa4.19□□□□□ -1.74
CCS1YMR038C YOL087CQ99247 1116 aa4.19□□□□□ -1.74
CCS1YMR038C ARF1P11076 181 aaKnown RBP4.18□□□□□ -1.74
CCS1YMR038C STE50P25344 346 aa4.18□□□□□ -1.74
CCS1YMR038C MRP20P32387 263 aa4.18□□□□□ -1.74
CCS1YMR038C SEC17P32602 292 aa4.18□□□□□ -1.74
CCS1YMR038C SOF1P33750 489 aaKnown RBP4.18□□□□□ -1.74
CCS1YMR038C BZZ1P38822 633 aa4.18□□□□□ -1.74
CCS1YMR038C LIN1P38852 340 aaPredicted RBP4.18□□□□□ -1.74
CCS1YMR038C MRX1P40050 688 aa4.18□□□□□ -1.74
CCS1YMR038C SOK1P40317 901 aa4.18□□□□□ -1.74
CCS1YMR038C CTK2P46962 323 aa4.18□□□□□ -1.74
CCS1YMR038C APS3P47064 194 aa4.18□□□□□ -1.74
CCS1YMR038C PGU1P47180 361 aa4.18□□□□□ -1.74
CCS1YMR038C YLR460CP54007 376 aa4.18□□□□□ -1.74
CCS1YMR038C ASI1P54074 624 aa4.18□□□□□ -1.74
CCS1YMR038C SMA2Q04658 369 aa4.18□□□□□ -1.74
CCS1YMR038C YPR091CQ06833 770 aa4.18□□□□□ -1.74
CCS1YMR038C ATX2Q12067 313 aa4.18□□□□□ -1.74
CCS1YMR038C RPN5Q12250 445 aaKnown RBP4.18□□□□□ -1.74
CCS1YMR038C YOS9Q99220 542 aa4.18□□□□□ -1.74
CCS1YMR038C FLO9P39712 1322 aa4.18□□□□□ -1.74
CCS1YMR038C URA2P07259 2214 aaKnown RBP4.17□□□□□ -1.74
CCS1YMR038C CBP2P03874 630 aaPredicted RBP4.17□□□□□ -1.74
CCS1YMR038C BAR1P12630 587 aa4.17□□□□□ -1.74
CCS1YMR038C RPB5P20434 215 aa4.17□□□□□ -1.74
CCS1YMR038C ATS1P31386 333 aa4.17□□□□□ -1.74
CCS1YMR038C CAT2P32796 670 aaKnown RBP4.17□□□□□ -1.74
CCS1YMR038C RPT5P33297 434 aaKnown RBP4.17□□□□□ -1.74
CCS1YMR038C PTC1P35182 281 aa4.17□□□□□ -1.74
CCS1YMR038C PRS3P38689 320 aaKnown RBP4.17□□□□□ -1.74
CCS1YMR038C YHR177WP38867 453 aa4.17□□□□□ -1.74
CCS1YMR038C AST2P39945 430 aaKnown RBP4.17□□□□□ -1.74
CCS1YMR038C GTO1P48239 356 aa4.17□□□□□ -1.74
CCS1YMR038C TOM22P49334 152 aa4.17□□□□□ -1.74
CCS1YMR038C RCF2P53721 224 aa4.17□□□□□ -1.74
CCS1YMR038C CAC2Q04199 468 aa4.17□□□□□ -1.74
CCS1YMR038C MRPL1Q04599 285 aa4.17□□□□□ -1.74
CCS1YMR038C GMC2Q06201 188 aa4.17□□□□□ -1.74
CCS1YMR038C YPR172WQ06608 200 aa4.17□□□□□ -1.74
CCS1YMR038C GEP5Q12393 293 aa4.17□□□□□ -1.74
CCS1YMR038C SPE4Q12455 300 aa4.17□□□□□ -1.74
CCS1YMR038C PSF1Q12488 208 aa4.17□□□□□ -1.74
CCS1YMR038C YPR096CO13587 100 aa4.16□□□□□ -1.74
CCS1YMR038C CBS2P14905 389 aa4.16□□□□□ -1.74
CCS1YMR038C CTA1P15202 515 aa4.16□□□□□ -1.74
CCS1YMR038C ERD1P16151 362 aa4.16□□□□□ -1.74
CCS1YMR038C PDA1P16387 420 aaKnown RBP4.16□□□□□ -1.74
CCS1YMR038C AAC3P18238 307 aa4.16□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms