RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W YSP2Q06681 1438 aa4.24□□□□□ -1.73
VPS36YLR417W CDC25P04821 1589 aa4.24□□□□□ -1.73
VPS36YLR417W SIR4P11978 1358 aa4.24□□□□□ -1.73
VPS36YLR417W PHO2P07269 559 aa4.24□□□□□ -1.73
VPS36YLR417W DEP1P31385 405 aa4.24□□□□□ -1.73
VPS36YLR417W RAD23P32628 398 aaKnown RBP4.24□□□□□ -1.73
VPS36YLR417W GTO1P48239 356 aa4.24□□□□□ -1.73
VPS36YLR417W IMP4P53941 290 aaKnown RBP4.24□□□□□ -1.73
VPS36YLR417W SLF1Q12034 447 aaKnown RBP4.24□□□□□ -1.73
VPS36YLR417W YDL109CQ12103 647 aa4.24□□□□□ -1.73
VPS36YLR417W YPR1Q12458 312 aa4.24□□□□□ -1.73
VPS36YLR417W PDR12Q02785 1511 aa4.23□□□□□ -1.73
VPS36YLR417W KRE5P22023 1365 aa4.23□□□□□ -1.73
VPS36YLR417W CHA1P25379 360 aaKnown RBP4.23□□□□□ -1.73
VPS36YLR417W YKL162CP36052 402 aa4.23□□□□□ -1.73
VPS36YLR417W YKL070WP36087 169 aa4.23□□□□□ -1.73
VPS36YLR417W ANR2P36090 516 aaPredicted RBP4.23□□□□□ -1.73
VPS36YLR417W LSM12P38828 187 aaKnown RBP4.23□□□□□ -1.73
VPS36YLR417W YGR210CP42942 411 aa4.23□□□□□ -1.73
VPS36YLR417W UBX2Q04228 584 aa4.23□□□□□ -1.73
VPS36YLR417W IZH2Q12442 317 aa4.23□□□□□ -1.73
VPS36YLR417W STE2D6VTK4 431 aa4.22□□□□□ -1.73
VPS36YLR417W RPL23AP0CX41 137 aaKnown RBP4.22□□□□□ -1.73
VPS36YLR417W RPL23BP0CX42 137 aaKnown RBP4.22□□□□□ -1.73
VPS36YLR417W CBS2P14905 389 aa4.22□□□□□ -1.73
VPS36YLR417W MEK1P24719 497 aaPredicted RBP4.22□□□□□ -1.73
VPS36YLR417W ITR2P30606 609 aa4.22□□□□□ -1.73
VPS36YLR417W HXT1P32465 570 aa4.22□□□□□ -1.73
VPS36YLR417W PTI1P39927 425 aaPredicted RBP4.22□□□□□ -1.73
VPS36YLR417W YNL208WP40159 199 aaKnown RBP4.22□□□□□ -1.73
VPS36YLR417W LSG1P53145 640 aaKnown RBP4.22□□□□□ -1.73
VPS36YLR417W BCP1Q06338 283 aa4.22□□□□□ -1.73
VPS36YLR417W SAM4Q08985 325 aaKnown RBP4.22□□□□□ -1.73
VPS36YLR417W HMS1Q12398 434 aa4.22□□□□□ -1.73
VPS36YLR417W RPL5P26321 297 aaKnown RBP4.21□□□□□ -1.73
VPS36YLR417W PRR1P28708 518 aa4.21□□□□□ -1.73
VPS36YLR417W DSN1P40568 576 aa4.21□□□□□ -1.73
VPS36YLR417W BNS1P50084 137 aa4.21□□□□□ -1.73
VPS36YLR417W YGL185CP53100 379 aa4.21□□□□□ -1.73
VPS36YLR417W MND1P53102 219 aa4.21□□□□□ -1.73
VPS36YLR417W MKC7P53379 596 aa4.21□□□□□ -1.73
VPS36YLR417W PLP2Q12017 286 aa4.21□□□□□ -1.73
VPS36YLR417W LDB17Q12342 491 aa4.21□□□□□ -1.73
VPS36YLR417W RAD50P12753 1312 aa4.21□□□□□ -1.74
VPS36YLR417W SSA3P09435 649 aaKnown RBP4.21□□□□□ -1.74
VPS36YLR417W EGT2P42835 1041 aa4.21□□□□□ -1.74
VPS36YLR417W YNL320WP42840 284 aa4.21□□□□□ -1.74
VPS36YLR417W BIR1P47134 954 aa4.21□□□□□ -1.74
VPS36YLR417W SHY1P53266 389 aa4.21□□□□□ -1.74
VPS36YLR417W CRH1P53301 507 aa4.21□□□□□ -1.74
VPS36YLR417W TRM82Q03774 444 aa4.21□□□□□ -1.74
VPS36YLR417W MFG1Q07684 458 aa4.21□□□□□ -1.74
VPS36YLR417W RLP24Q07915 199 aaKnown RBP4.21□□□□□ -1.74
VPS36YLR417W TY1B-HO13535 1793 aa4.2□□□□□ -1.74
VPS36YLR417W TY1B-DR5P0C2I2 1755 aa4.2□□□□□ -1.74
VPS36YLR417W TY1B-DR6P0C2I3 1755 aa4.2□□□□□ -1.74
VPS36YLR417W TY1B-LR2P0C2I5 1755 aa4.2□□□□□ -1.74
VPS36YLR417W TY1B-LR3P0C2I6 1755 aaKnown RBP4.2□□□□□ -1.74
VPS36YLR417W TY1B-PR1P0C2I9 1755 aaKnown RBP4.2□□□□□ -1.74
VPS36YLR417W TY1B-PR2P0C2J0 1756 aa4.2□□□□□ -1.74
VPS36YLR417W TY1B-PR3P0C2J1 1755 aaKnown RBP4.2□□□□□ -1.74
VPS36YLR417W TY1B-JR1P47098 1755 aa4.2□□□□□ -1.74
VPS36YLR417W TY1B-ML2Q03434 1755 aaKnown RBP4.2□□□□□ -1.74
VPS36YLR417W TY1B-ER1Q03612 1755 aa4.2□□□□□ -1.74
VPS36YLR417W TY1B-ML1Q04711 1755 aaKnown RBP4.2□□□□□ -1.74
VPS36YLR417W TY1B-GR2Q12269 1755 aa4.2□□□□□ -1.74
VPS36YLR417W TY1B-OLQ12273 1755 aa4.2□□□□□ -1.74
VPS36YLR417W TY1B-PLQ12414 1755 aaKnown RBP4.2□□□□□ -1.74
VPS36YLR417W PDR11P40550 1411 aa4.2□□□□□ -1.74
VPS36YLR417W YMR262WP38430 313 aa4.2□□□□□ -1.74
VPS36YLR417W FHL1P39521 936 aa4.2□□□□□ -1.74
VPS36YLR417W DFG10P40526 253 aa4.2□□□□□ -1.74
VPS36YLR417W YPI1P43587 155 aa4.2□□□□□ -1.74
VPS36YLR417W ATG18P43601 500 aa4.2□□□□□ -1.74
VPS36YLR417W COX16P47081 118 aa4.2□□□□□ -1.74
VPS36YLR417W YGL242CP53066 181 aa4.2□□□□□ -1.74
VPS36YLR417W YNL260CP53846 198 aa4.2□□□□□ -1.74
VPS36YLR417W YMR027WQ04371 470 aa4.2□□□□□ -1.74
VPS36YLR417W SLM3Q12093 417 aa4.2□□□□□ -1.74
VPS36YLR417W SIA1Q12212 622 aa4.2□□□□□ -1.74
VPS36YLR417W NAG1Q8TGN9 163 aa4.2□□□□□ -1.74
VPS36YLR417W OKP1P53298 406 aa4.19□□□□□ -1.74
VPS36YLR417W YHC1Q05900 231 aaKnown RBP4.19□□□□□ -1.74
VPS36YLR417W KAP95Q06142 861 aaKnown RBP4.19□□□□□ -1.74
VPS36YLR417W FRE8Q12209 686 aa4.19□□□□□ -1.74
VPS36YLR417W DNF2Q12675 1612 aa4.19□□□□□ -1.74
VPS36YLR417W ECT1P33412 323 aa4.18□□□□□ -1.74
VPS36YLR417W RCK2P38623 610 aa4.18□□□□□ -1.74
VPS36YLR417W HCH1P53834 153 aa4.18□□□□□ -1.74
VPS36YLR417W YTH1Q06102 208 aaPredicted RBP4.18□□□□□ -1.74
VPS36YLR417W TLG2Q08144 397 aa4.18□□□□□ -1.74
VPS36YLR417W DDC1Q08949 612 aa4.18□□□□□ -1.74
VPS36YLR417W RPN6Q12377 434 aa4.18□□□□□ -1.74
VPS36YLR417W LDS1P31379 325 aa4.18□□□□□ -1.74
VPS36YLR417W MRPL10P36520 322 aa4.18□□□□□ -1.74
VPS36YLR417W SMF2P38778 549 aa4.18□□□□□ -1.74
VPS36YLR417W PET100P38958 111 aa4.18□□□□□ -1.74
VPS36YLR417W EMC2P47133 292 aaKnown RBP4.18□□□□□ -1.74
VPS36YLR417W SFM1Q12314 213 aa4.18□□□□□ -1.74
VPS36YLR417W ROM2P51862 1356 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 118.1 ms