RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A CYC2P38909 366 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A CCT2P39076 527 aaKnown RBP1.64□□□□□ -2.15
YLR035C-AYLR035C-A DHH1P39517 506 aaKnown RBP1.64□□□□□ -2.15
YLR035C-AYLR035C-A YMR147WP40218 223 aaKnown RBP1.64□□□□□ -2.15
YLR035C-AYLR035C-A ARC1P46672 376 aaKnown RBP1.64□□□□□ -2.15
YLR035C-AYLR035C-A IRC8P47046 822 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A YGL108CP53139 140 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A CAF40P53829 373 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A RHO5P53879 331 aaKnown RBP1.64□□□□□ -2.15
YLR035C-AYLR035C-A RPA49Q01080 415 aaPredicted RBP1.64□□□□□ -2.15
YLR035C-AYLR035C-A SKI8Q02793 397 aaPredicted RBP1.64□□□□□ -2.15
YLR035C-AYLR035C-A YDC1Q02896 317 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A TDA1Q03533 586 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A HER2Q03557 464 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A YDR222WQ04925 415 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A CIA1Q05583 330 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A YFH1Q07540 174 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A RTT109Q07794 436 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A SGT1Q08446 395 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A FRE3Q08905 711 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A TGS1Q12052 315 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A SWT1Q12104 458 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A GPM3Q12326 303 aa1.64□□□□□ -2.15
YLR035C-AYLR035C-A TFB5Q3E7C1 72 aaPredicted RBP1.64□□□□□ -2.15
YLR035C-AYLR035C-A ATP2P00830 511 aaKnown RBP1.63□□□□□ -2.15
YLR035C-AYLR035C-A SCEIP03882 235 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A RAD10P06838 210 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A SPS2P08459 502 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A NFT1P0CE68 1218 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A CBS1P14066 229 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A DAL81P21657 970 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A EXG1P23776 448 aaKnown RBP1.63□□□□□ -2.15
YLR035C-AYLR035C-A RFA2P26754 273 aaKnown RBP1.63□□□□□ -2.15
YLR035C-AYLR035C-A GSY2P27472 705 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A UPS2P35200 230 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A SPC34P36131 295 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A MRPL3P36516 390 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A MRPL24P36525 258 aaPredicted RBP1.63□□□□□ -2.15
YLR035C-AYLR035C-A YCR087C-AP37263 153 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A CBP4P37267 147 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A UBA4P38820 440 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A PRP39P39682 629 aaKnown RBP1.63□□□□□ -2.15
YLR035C-AYLR035C-A MAM33P40513 266 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A HXT9P40885 567 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A MIC19P43594 170 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A FAR3P46671 204 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A FMP33P46998 180 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A DSD1P53095 428 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A YGL082WP53155 381 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A COG7P53195 279 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A YGR079WP53249 370 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A YGR127WP53275 312 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A RSM27P53305 110 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A YTP1P53584 459 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A HCH1P53834 153 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A REG1Q00816 1014 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A DIG2Q03373 323 aaKnown RBP1.63□□□□□ -2.15
YLR035C-AYLR035C-A YET2Q04210 160 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A PLM2Q04383 521 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A GMC1Q04399 608 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A ROY1Q04847 553 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A RRP45Q05636 305 aaKnown RBP1.63□□□□□ -2.15
YLR035C-AYLR035C-A GAS2Q06135 555 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A NEJ1Q06148 342 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A LDB18Q07887 179 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A YNG1Q08465 219 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A RDR1Q08904 546 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A MEX67Q99257 599 aaKnown RBP1.63□□□□□ -2.15
YLR035C-AYLR035C-A RAD6P06104 172 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A RPL42AP0CX27 106 aaKnown RBP1.63□□□□□ -2.15
YLR035C-AYLR035C-A RPL42BP0CX28 106 aaKnown RBP1.63□□□□□ -2.15
YLR035C-AYLR035C-A SCH9P11792 824 aaKnown RBP1.63□□□□□ -2.15
YLR035C-AYLR035C-A PEP5P12868 1029 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A CBS2P14905 389 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A URA6P15700 204 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A ZRC1P20107 442 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A DBR1P24309 405 aaKnown RBP1.63□□□□□ -2.15
YLR035C-AYLR035C-A BUD5P25300 642 aaPredicted RBP1.63□□□□□ -2.15
YLR035C-AYLR035C-A CPR4P25334 318 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A PEX3P28795 441 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A MDH3P32419 343 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
YLR035C-AYLR035C-A NTR2P36118 322 aaPredicted RBP1.63□□□□□ -2.15
YLR035C-AYLR035C-A SKG1P36169 355 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A ECM31P38122 312 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A DTR1P38125 572 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A EFM1P38732 585 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A CHL4P38907 458 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A EXO1P39875 702 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A PAC2P39937 518 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A RGI2P40188 164 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A POG1P40473 351 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A IDP2P41939 412 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A PMT5P52867 743 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A COG1P53079 417 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A YGL159WP53110 370 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A COG5P53951 403 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A MTG1Q03151 367 aaPredicted RBP1.63□□□□□ -2.15
YLR035C-AYLR035C-A PEX10Q05568 337 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A MHR1Q06630 226 aa1.63□□□□□ -2.15
YLR035C-AYLR035C-A BER1Q06688 274 aaKnown RBP1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms