RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W CHL4P38907 458 aa6.85□□□□□ -1.31
SNF7YLR025W GDS1P41913 522 aa6.85□□□□□ -1.31
SNF7YLR025W MDE1P47095 244 aa6.85□□□□□ -1.31
SNF7YLR025W HOS2P53096 452 aaPredicted RBP6.85□□□□□ -1.31
SNF7YLR025W YGL101WP53144 215 aa6.85□□□□□ -1.31
SNF7YLR025W MRH4P53166 561 aa6.85□□□□□ -1.31
SNF7YLR025W CDH1P53197 566 aa6.85□□□□□ -1.31
SNF7YLR025W ORM1P53224 222 aa6.85□□□□□ -1.31
SNF7YLR025W YLR173WQ06247 608 aa6.85□□□□□ -1.31
SNF7YLR025W RRG7Q08774 242 aaPredicted RBP6.85□□□□□ -1.31
SNF7YLR025W RPS21BQ3E754 87 aaKnown RBP6.85□□□□□ -1.31
SNF7YLR025W YOR019WQ99248 730 aa6.85□□□□□ -1.31
SNF7YLR025W SLH1P53327 1967 aaKnown RBP6.84□□□□□ -1.31
SNF7YLR025W MSB2P32334 1306 aa6.84□□□□□ -1.31
SNF7YLR025W PEP4P07267 405 aaKnown RBP6.84□□□□□ -1.31
SNF7YLR025W PET122P10355 254 aa6.84□□□□□ -1.31
SNF7YLR025W PTP1P25044 335 aa6.84□□□□□ -1.31
SNF7YLR025W ERG9P29704 444 aa6.84□□□□□ -1.31
SNF7YLR025W HOM6P31116 359 aaKnown RBP6.84□□□□□ -1.31
SNF7YLR025W HYM1P32464 399 aa6.84□□□□□ -1.31
SNF7YLR025W SRB5P32585 307 aa6.84□□□□□ -1.31
SNF7YLR025W SKN1P33336 771 aa6.84□□□□□ -1.31
SNF7YLR025W ZRT3P34240 503 aa6.84□□□□□ -1.31
SNF7YLR025W SDS22P36047 338 aa6.84□□□□□ -1.31
SNF7YLR025W SRO77P38163 1010 aa6.84□□□□□ -1.31
SNF7YLR025W MLH1P38920 769 aa6.84□□□□□ -1.31
SNF7YLR025W YAL037WP39728 267 aa6.84□□□□□ -1.31
SNF7YLR025W SDP1P40479 209 aa6.84□□□□□ -1.31
SNF7YLR025W YJL218WP40892 196 aaKnown RBP6.84□□□□□ -1.31
SNF7YLR025W PFS2P42841 465 aaKnown RBP6.84□□□□□ -1.31
SNF7YLR025W MDV1P47025 714 aa6.84□□□□□ -1.31
SNF7YLR025W MKC7P53379 596 aa6.84□□□□□ -1.31
SNF7YLR025W YML096WQ04489 525 aa6.84□□□□□ -1.31
SNF7YLR025W ELP6Q04868 273 aa6.84□□□□□ -1.31
SNF7YLR025W RSF1Q05043 376 aa6.84□□□□□ -1.31
SNF7YLR025W YEH1Q07804 573 aa6.84□□□□□ -1.31
SNF7YLR025W SPC3Q12133 184 aa6.84□□□□□ -1.31
SNF7YLR025W LEU9Q12166 604 aaKnown RBP6.84□□□□□ -1.31
SNF7YLR025W APC2Q12440 853 aa6.84□□□□□ -1.31
SNF7YLR025W RRP12Q12754 1228 aaKnown RBP6.84□□□□□ -1.31
SNF7YLR025W SIR2P06700 562 aa6.83□□□□□ -1.32
SNF7YLR025W YOL162WP0CF19 215 aa6.83□□□□□ -1.32
SNF7YLR025W SEC12P11655 471 aa6.83□□□□□ -1.32
SNF7YLR025W CBS1P14066 229 aa6.83□□□□□ -1.32
SNF7YLR025W FUR1P18562 216 aaKnown RBP6.83□□□□□ -1.32
SNF7YLR025W ATG22P25568 528 aa6.83□□□□□ -1.32
SNF7YLR025W FUN26P31381 517 aa6.83□□□□□ -1.32
SNF7YLR025W RNP1P32385 249 aa6.83□□□□□ -1.32
SNF7YLR025W YKL097CP34245 136 aa6.83□□□□□ -1.32
SNF7YLR025W BET3P36149 193 aa6.83□□□□□ -1.32
SNF7YLR025W YBR242WP38331 238 aa6.83□□□□□ -1.32
SNF7YLR025W ECM34P38728 170 aa6.83□□□□□ -1.32
SNF7YLR025W YHR097CP38809 366 aaKnown RBP6.83□□□□□ -1.32
SNF7YLR025W LYS1P38998 373 aaRIP-Chip data6.83□□□□□ -1.32not detected
SNF7YLR025W HPA3P39979 161 aa6.83□□□□□ -1.32
SNF7YLR025W ALK1P43633 760 aaKnown RBP6.83□□□□□ -1.32
SNF7YLR025W RBG2P53295 368 aaKnown RBP6.83□□□□□ -1.32
SNF7YLR025W RHO3Q00245 231 aaKnown RBP6.83□□□□□ -1.32
SNF7YLR025W EGD1Q02642 157 aaKnown RBP6.83□□□□□ -1.32
SNF7YLR025W OST6Q03723 332 aa6.83□□□□□ -1.32
SNF7YLR025W COA4Q05809 96 aa6.83□□□□□ -1.32
SNF7YLR025W FRE5Q08908 694 aa6.83□□□□□ -1.32
SNF7YLR025W MMT2Q08970 484 aa6.83□□□□□ -1.32
SNF7YLR025W BSC1Q12140 328 aa6.83□□□□□ -1.32
SNF7YLR025W YPR1Q12458 312 aa6.83□□□□□ -1.32
SNF7YLR025W GAL7P08431 366 aa6.82□□□□□ -1.32
SNF7YLR025W PHO80P20052 293 aa6.82□□□□□ -1.32
SNF7YLR025W PPH21P23594 369 aa6.82□□□□□ -1.32
SNF7YLR025W ITR1P30605 584 aa6.82□□□□□ -1.32
SNF7YLR025W ACH1P32316 526 aa6.82□□□□□ -1.32
SNF7YLR025W RML2P32611 393 aa6.82□□□□□ -1.32
SNF7YLR025W MTC2P34246 357 aa6.82□□□□□ -1.32
SNF7YLR025W YKL063CP35725 167 aa6.82□□□□□ -1.32
SNF7YLR025W YOR062CP36025 268 aa6.82□□□□□ -1.32
SNF7YLR025W UTP30P36144 274 aaKnown RBP6.82□□□□□ -1.32
SNF7YLR025W MNL1P38888 796 aa6.82□□□□□ -1.32
SNF7YLR025W YIL166CP40445 542 aa6.82□□□□□ -1.32
SNF7YLR025W YIL108WP40483 696 aaKnown RBP6.82□□□□□ -1.32
SNF7YLR025W YKE4P40544 346 aa6.82□□□□□ -1.32
SNF7YLR025W FET5P43561 622 aa6.82□□□□□ -1.32
SNF7YLR025W MNN5P46982 586 aa6.82□□□□□ -1.32
SNF7YLR025W LSM7P53905 115 aaKnown RBP6.82□□□□□ -1.32
SNF7YLR025W NUP116Q02630 1113 aa6.82□□□□□ -1.32
SNF7YLR025W PFA5Q03289 374 aa6.82□□□□□ -1.32
SNF7YLR025W BUR2Q05949 395 aa6.82□□□□□ -1.32
SNF7YLR025W ARV1Q06541 321 aa6.82□□□□□ -1.32
SNF7YLR025W YPR022CQ12139 1133 aa6.82□□□□□ -1.32
SNF7YLR025W MDM32Q12171 622 aa6.82□□□□□ -1.32
SNF7YLR025W YOL114CQ12322 202 aa6.82□□□□□ -1.32
SNF7YLR025W RTN2Q12443 393 aa6.82□□□□□ -1.32
SNF7YLR025W YLR099W-AQ3E798 87 aa6.82□□□□□ -1.32
SNF7YLR025W HOP1P20050 605 aa6.81□□□□□ -1.32
SNF7YLR025W YCR016WP25617 290 aaKnown RBP6.81□□□□□ -1.32
SNF7YLR025W HOG1P32485 435 aa6.81□□□□□ -1.32
SNF7YLR025W TMA19P35691 167 aaKnown RBP6.81□□□□□ -1.32
SNF7YLR025W SNU114P36048 1008 aaKnown RBP6.81□□□□□ -1.32
SNF7YLR025W AUR1P36107 401 aaPredicted RBP6.81□□□□□ -1.32
SNF7YLR025W RTC2P38279 296 aa6.81□□□□□ -1.32
SNF7YLR025W TRR2P38816 342 aa6.81□□□□□ -1.32
SNF7YLR025W FMO1P38866 432 aa6.81□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms