RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKT6	YKL196C	PRE7	P23724	241 aa	Known RBP	3.21	□□□□□ -1.9
YKT6	YKL196C	DAL2	P25335	343 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	RRT12	P25381	491 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	RSA4	P25382	515 aa	Known RBP	3.21	□□□□□ -1.9
YKT6	YKL196C	RPS5	P26783	225 aa	Known RBP	3.21	□□□□□ -1.9
YKT6	YKL196C	ERV1	P27882	189 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
YKT6	YKL196C	NDC1	P32500	655 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	SPS19	P32573	292 aa	Known RBP	3.21	□□□□□ -1.9
YKT6	YKL196C	SPR1	P32603	445 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	YBL055C	P34220	418 aa	Predicted RBP	3.21	□□□□□ -1.9
YKT6	YKL196C	TUL1	P36096	758 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	NTR2	P36118	322 aa	Predicted RBP	3.21	□□□□□ -1.9
YKT6	YKL196C	DRE2	P36152	348 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	CBP4	P37267	147 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	BNA4	P38169	460 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	RRN10	P38204	145 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	FAD1	P38913	306 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	DHH1	P39517	506 aa	Known RBP	3.21	□□□□□ -1.9
YKT6	YKL196C	BDH1	P39714	382 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	LCP5	P40079	357 aa	Predicted RBP	3.21	□□□□□ -1.9
YKT6	YKL196C	PUG1	P40100	303 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	SLZ1	P40167	298 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	MAM33	P40513	266 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	YKE4	P40544	346 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	MEP2	P41948	499 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	SWP82	P43554	623 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	YHC3	P47040	408 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	YJR030C	P47101	745 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	YAE1	P47118	141 aa	Predicted RBP	3.21	□□□□□ -1.9
YKT6	YKL196C	ADO1	P47143	340 aa	Known RBP	3.21	□□□□□ -1.9
YKT6	YKL196C	PHB2	P50085	310 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	YPT32	P51996	222 aa	Known RBP	3.21	□□□□□ -1.9
YKT6	YKL196C	COG1	P53079	417 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	OCA2	P53949	197 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	COG5	P53951	403 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	EFM6	P53970	246 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	APS2	Q00381	147 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	AAT1	Q01802	451 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	RNY1	Q02933	434 aa	Known RBP	3.21	□□□□□ -1.9
YKT6	YKL196C	YDR249C	Q03787	373 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	ARX1	Q03862	593 aa	Known RBP	3.21	□□□□□ -1.9
YKT6	YKL196C	PKR1	Q03880	122 aa	Known RBP	3.21	□□□□□ -1.9
YKT6	YKL196C	BUR2	Q05949	395 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	NKP2	Q06162	153 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	RIF2	Q06208	395 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	IMA2	Q08295	589 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	FEX2	Q08991	375 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	MRX4	Q12467	430 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	SLO1	Q3E784	85 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.21	□□□□□ -1.9
YKT6	YKL196C	SAS5	Q99314	248 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	PSK1	P31374	1356 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	PEP1	P32319	1579 aa		3.21	□□□□□ -1.9
YKT6	YKL196C	THP2	O13539	261 aa	Known RBP	3.2	□□□□□ -1.9
YKT6	YKL196C	SPS4	P09937	338 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	SNF3	P10870	884 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	HEM15	P16622	393 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	SEC59	P20048	519 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	PRE1	P22141	198 aa	Known RBP	3.2	□□□□□ -1.9
YKT6	YKL196C	HXT2	P23585	541 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	EXG1	P23776	448 aa	Known RBP	3.2	□□□□□ -1.9
YKT6	YKL196C	CWP1	P28319	239 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	YIM1	P28625	365 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	SUA7	P29055	345 aa	Predicted RBP	3.2	□□□□□ -1.9
YKT6	YKL196C	TRR1	P29509	319 aa	Known RBP	3.2	□□□□□ -1.9
YKT6	YKL196C	SPT14	P32363	452 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	HYM1	P32464	399 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	ECM25	P32525	599 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	JEN1	P36035	616 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	SKG1	P36169	355 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	MRPL24	P36525	258 aa	Predicted RBP	3.2	□□□□□ -1.9
YKT6	YKL196C	SRO77	P38163	1010 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	VBA2	P38358	474 aa	Known RBP	3.2	□□□□□ -1.9
YKT6	YKL196C	EFM1	P38732	585 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	HAT2	P39984	401 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	PFK26	P40433	827 aa	Known RBP	3.2	□□□□□ -1.9
YKT6	YKL196C	IDP2	P41939	412 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	YGR210C	P42942	411 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	TRS85	P46944	698 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	ASG7	P46993	209 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	JHD2	P47156	728 aa	Predicted RBP	3.2	□□□□□ -1.9
YKT6	YKL196C	SOL1	P50278	321 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	COG7	P53195	279 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	RSM27	P53305	110 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	CAF40	P53829	373 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	MTQ1	P53944	314 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	MOT3	P54785	490 aa	Known RBP	3.2	□□□□□ -1.9
YKT6	YKL196C	NUP49	Q02199	472 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	AIM33	Q04516	312 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	YPR078C	Q06813	372 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	PRP11	Q07350	266 aa	Predicted RBP	3.2	□□□□□ -1.9
YKT6	YKL196C	AAD4	Q07747	329 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	YOR365C	Q08844	703 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	FCF2	Q12035	217 aa	Predicted RBP	3.2	□□□□□ -1.9
YKT6	YKL196C	DAP1	Q12091	152 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	FCY22	Q12119	530 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	WTM1	Q12363	437 aa	Known RBP	3.2	□□□□□ -1.9
YKT6	YKL196C	RKM5	Q12367	367 aa		3.2	□□□□□ -1.9
YKT6	YKL196C	FMP16	Q12497	93 aa		3.2	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms