RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C CTS2Q06350 511 aa1.29□□□□□ -2.2
VPS55YJR044C ASR1Q06834 288 aa1.29□□□□□ -2.2
VPS55YJR044C SMC5Q08204 1093 aa1.29□□□□□ -2.2
VPS55YJR044C RAX1Q08760 435 aa1.29□□□□□ -2.2
VPS55YJR044C YLR108CQ12259 485 aa1.29□□□□□ -2.2
VPS55YJR044C YCR024C-BQ3E7Z8 88 aa1.29□□□□□ -2.2
VPS55YJR044C UBA3Q99344 299 aa1.29□□□□□ -2.2
VPS55YJR044C CHD1P32657 1468 aa1.29□□□□□ -2.2
VPS55YJR044C HIS1P00498 297 aaKnown RBP1.28□□□□□ -2.2
VPS55YJR044C HPR1P17629 752 aaKnown RBP1.28□□□□□ -2.2
VPS55YJR044C MET16P18408 261 aaPredicted RBP1.28□□□□□ -2.2
VPS55YJR044C UTR1P21373 530 aa1.28□□□□□ -2.2
VPS55YJR044C DAL2P25335 343 aa1.28□□□□□ -2.2
VPS55YJR044C ERG9P29704 444 aa1.28□□□□□ -2.2
VPS55YJR044C ITR1P30605 584 aa1.28□□□□□ -2.2
VPS55YJR044C MKK1P32490 508 aa1.28□□□□□ -2.2
VPS55YJR044C ZUO1P32527 433 aaKnown RBP1.28□□□□□ -2.2
VPS55YJR044C IMP3P32899 183 aaPredicted RBP1.28□□□□□ -2.2
VPS55YJR044C KTI12P34253 313 aaKnown RBP1.28□□□□□ -2.2
VPS55YJR044C YKL063CP35725 167 aa1.28□□□□□ -2.2
VPS55YJR044C YKR015CP36111 568 aa1.28□□□□□ -2.2
VPS55YJR044C GPX2P38143 162 aa1.28□□□□□ -2.2
VPS55YJR044C MAL32P38158 584 aa1.28□□□□□ -2.2
VPS55YJR044C IST2P38250 946 aa1.28□□□□□ -2.2
VPS55YJR044C TAE1P38340 232 aa1.28□□□□□ -2.2
VPS55YJR044C NDT80P38830 627 aa1.28□□□□□ -2.2
VPS55YJR044C YNL208WP40159 199 aaKnown RBP1.28□□□□□ -2.2
VPS55YJR044C SHQ1P40486 507 aaPredicted RBP1.28□□□□□ -2.2
VPS55YJR044C INA22P40576 216 aa1.28□□□□□ -2.2
VPS55YJR044C YGR210CP42942 411 aa1.28□□□□□ -2.2
VPS55YJR044C GCN20P43535 752 aaKnown RBP1.28□□□□□ -2.2
VPS55YJR044C AGP3P43548 558 aa1.28□□□□□ -2.2
VPS55YJR044C TAD2P47058 250 aa1.28□□□□□ -2.2
VPS55YJR044C KAP114P53067 1004 aa1.28□□□□□ -2.2
VPS55YJR044C MRM2P53123 320 aa1.28□□□□□ -2.2
VPS55YJR044C SWC4P53201 476 aa1.28□□□□□ -2.2
VPS55YJR044C CPD1P53314 239 aa1.28□□□□□ -2.2
VPS55YJR044C MAL12P53341 584 aa1.28□□□□□ -2.2
VPS55YJR044C PGA2P53903 129 aa1.28□□□□□ -2.2
VPS55YJR044C ELP3Q02908 557 aaKnown RBP1.28□□□□□ -2.2
VPS55YJR044C YMR209CQ03648 457 aa1.28□□□□□ -2.2
VPS55YJR044C BNA7Q04066 261 aa1.28□□□□□ -2.2
VPS55YJR044C GTO3Q04806 366 aa1.28□□□□□ -2.2
VPS55YJR044C COX20Q04935 205 aa1.28□□□□□ -2.2
VPS55YJR044C ATG38Q05789 226 aaKnown RBP1.28□□□□□ -2.2
VPS55YJR044C GAS2Q06135 555 aa1.28□□□□□ -2.2
VPS55YJR044C BOP2Q06150 570 aa1.28□□□□□ -2.2
VPS55YJR044C YPR172WQ06608 200 aa1.28□□□□□ -2.2
VPS55YJR044C CMS1Q07897 291 aaKnown RBP1.28□□□□□ -2.2
VPS55YJR044C PAM18Q07914 168 aa1.28□□□□□ -2.2
VPS55YJR044C DDC1Q08949 612 aa1.28□□□□□ -2.2
VPS55YJR044C PER33Q12144 273 aa1.28□□□□□ -2.2
VPS55YJR044C UTP23Q12339 254 aaKnown RBP1.28□□□□□ -2.2
VPS55YJR044C DET1Q99288 334 aaKnown RBP1.28□□□□□ -2.2
VPS55YJR044C ADH2P00331 348 aaKnown RBP1.27□□□□□ -2.21
VPS55YJR044C TDH3P00359 332 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
VPS55YJR044C RAD1P06777 1100 aa1.27□□□□□ -2.21
VPS55YJR044C SSC1P0CS90 654 aaKnown RBP1.27□□□□□ -2.21
VPS55YJR044C NHP6BP11633 99 aaKnown RBP1.27□□□□□ -2.21
VPS55YJR044C OSM1P21375 501 aaKnown RBP1.27□□□□□ -2.21
VPS55YJR044C RPL24BP24000 155 aaKnown RBP1.27□□□□□ -2.21
VPS55YJR044C CWP1P28319 239 aa1.27□□□□□ -2.21
VPS55YJR044C GCG1P32656 232 aaKnown RBP1.27□□□□□ -2.21
VPS55YJR044C YBL059WP34224 193 aa1.27□□□□□ -2.21
VPS55YJR044C COS9P36034 407 aa1.27□□□□□ -2.21
VPS55YJR044C YKL162CP36052 402 aa1.27□□□□□ -2.21
VPS55YJR044C DTR1P38125 572 aa1.27□□□□□ -2.21
VPS55YJR044C PEX32P38292 413 aa1.27□□□□□ -2.21
VPS55YJR044C SIP3P38717 1229 aa1.27□□□□□ -2.21
VPS55YJR044C WSC4P38739 605 aa1.27□□□□□ -2.21
VPS55YJR044C YHR035WP38769 630 aa1.27□□□□□ -2.21
VPS55YJR044C YER085CP40058 173 aa1.27□□□□□ -2.21
VPS55YJR044C SCC4P40090 624 aa1.27□□□□□ -2.21
VPS55YJR044C CDC40P40968 455 aaPredicted RBP1.27□□□□□ -2.21
VPS55YJR044C YFL040WP43562 540 aa1.27□□□□□ -2.21
VPS55YJR044C YFR057WP43625 151 aa1.27□□□□□ -2.21
VPS55YJR044C TOS2P50078 622 aa1.27□□□□□ -2.21
VPS55YJR044C NRM1P53718 249 aa1.27□□□□□ -2.21
VPS55YJR044C ALG11P53954 548 aaKnown RBP1.27□□□□□ -2.21
VPS55YJR044C REX2P54964 269 aaKnown RBP1.27□□□□□ -2.21
VPS55YJR044C YPL077CQ02831 240 aa1.27□□□□□ -2.21
VPS55YJR044C SRL4Q03085 281 aa1.27□□□□□ -2.21
VPS55YJR044C CSM3Q04659 317 aa1.27□□□□□ -2.21
VPS55YJR044C PBA1Q05778 276 aa1.27□□□□□ -2.21
VPS55YJR044C SSQ1Q05931 657 aaPredicted RBP1.27□□□□□ -2.21
VPS55YJR044C CTR3Q06686 241 aa1.27□□□□□ -2.21
VPS55YJR044C MDM36Q06820 579 aa1.27□□□□□ -2.21
VPS55YJR044C YPR091CQ06833 770 aa1.27□□□□□ -2.21
VPS55YJR044C GAT3Q07928 141 aa1.27□□□□□ -2.21
VPS55YJR044C RRG7Q08774 242 aaPredicted RBP1.27□□□□□ -2.21
VPS55YJR044C PLP2Q12017 286 aa1.27□□□□□ -2.21
VPS55YJR044C THP3Q12049 470 aaKnown RBP1.27□□□□□ -2.21
VPS55YJR044C YDL109CQ12103 647 aa1.27□□□□□ -2.21
VPS55YJR044C APC9Q12107 265 aa1.27□□□□□ -2.21
VPS55YJR044C FCY22Q12119 530 aa1.27□□□□□ -2.21
VPS55YJR044C YOR029WQ12243 111 aa1.27□□□□□ -2.21
VPS55YJR044C GIS3Q12418 502 aa1.27□□□□□ -2.21
VPS55YJR044C YPR064WQ12492 139 aa1.27□□□□□ -2.21
VPS55YJR044C SEY1Q99287 776 aa1.27□□□□□ -2.21
VPS55YJR044C MHP1P43638 1398 aa1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms