RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W RTN2Q12443 393 aa10.27□□□□□ -0.77
SIM1YIL123W FMP27Q06179 2628 aa10.26□□□□□ -0.77
SIM1YIL123W CAP2P13517 287 aa10.26□□□□□ -0.77
SIM1YIL123W ECT1P33412 323 aa10.26□□□□□ -0.77
SIM1YIL123W JEN1P36035 616 aa10.26□□□□□ -0.77
SIM1YIL123W SKN7P38889 622 aa10.26□□□□□ -0.77
SIM1YIL123W YIL165CP40446 119 aa10.26□□□□□ -0.77
SIM1YIL123W HIS6P40545 261 aa10.26□□□□□ -0.77
SIM1YIL123W LEM3P42838 414 aa10.26□□□□□ -0.77
SIM1YIL123W YJR098CP47139 656 aa10.26□□□□□ -0.77
SIM1YIL123W YGR266WP53326 701 aa10.26□□□□□ -0.77
SIM1YIL123W RRN9P53437 365 aa10.26□□□□□ -0.77
SIM1YIL123W YNR062CP53748 327 aa10.26□□□□□ -0.77
SIM1YIL123W TDA1Q03533 586 aa10.26□□□□□ -0.77
SIM1YIL123W NPC2Q12408 173 aa10.26□□□□□ -0.77
SIM1YIL123W SFG1Q12507 346 aa10.26□□□□□ -0.77
SIM1YIL123W NAR1P23503 491 aaKnown RBP10.25□□□□□ -0.77
SIM1YIL123W RPP1P38786 293 aa10.25□□□□□ -0.77
SIM1YIL123W ATG18P43601 500 aa10.25□□□□□ -0.77
SIM1YIL123W IRC6P43615 237 aa10.25□□□□□ -0.77
SIM1YIL123W YJR141WP47172 347 aaPredicted RBP10.25□□□□□ -0.77
SIM1YIL123W TRM9P49957 279 aa10.25□□□□□ -0.77
SIM1YIL123W BUD9P53226 547 aa10.25□□□□□ -0.77
SIM1YIL123W YGR067CP53243 804 aa10.25□□□□□ -0.77
SIM1YIL123W YMR210WQ03649 449 aa10.25□□□□□ -0.77
SIM1YIL123W RGC1Q06108 1083 aaKnown RBP10.25□□□□□ -0.77
SIM1YIL123W NBA1Q08229 501 aaKnown RBP10.25□□□□□ -0.77
SIM1YIL123W RRG7Q08774 242 aaPredicted RBP10.25□□□□□ -0.77
SIM1YIL123W AI4P03878 556 aa10.24□□□□□ -0.77
SIM1YIL123W YSF3P0C074 85 aaPredicted RBP10.24□□□□□ -0.77
SIM1YIL123W HMG1P12683 1054 aa10.24□□□□□ -0.77
SIM1YIL123W GCN3P14741 305 aa10.24□□□□□ -0.77
SIM1YIL123W YPK2P18961 677 aa10.24□□□□□ -0.77
SIM1YIL123W YCL002CP25565 263 aa10.24□□□□□ -0.77
SIM1YIL123W FAA1P30624 700 aaKnown RBP10.24□□□□□ -0.77
SIM1YIL123W NIC96P34077 839 aa10.24□□□□□ -0.77
SIM1YIL123W YKL071WP36086 256 aa10.24□□□□□ -0.77
SIM1YIL123W DTR1P38125 572 aa10.24□□□□□ -0.77
SIM1YIL123W MSE1P48525 536 aa10.24□□□□□ -0.77
SIM1YIL123W PAU12P53343 120 aa10.24□□□□□ -0.77
SIM1YIL123W YAT1P80235 687 aa10.24□□□□□ -0.77
SIM1YIL123W PFA5Q03289 374 aa10.24□□□□□ -0.77
SIM1YIL123W HDA2Q06629 674 aa10.24□□□□□ -0.77
SIM1YIL123W REX3Q12090 404 aa10.24□□□□□ -0.77
SIM1YIL123W FRE6Q12473 712 aa10.24□□□□□ -0.77
SIM1YIL123W EXG1P23776 448 aaKnown RBP10.24□□□□□ -0.77
SIM1YIL123W FUN26P31381 517 aa10.24□□□□□ -0.77
SIM1YIL123W THI2P38141 450 aa10.24□□□□□ -0.77
SIM1YIL123W CCZ1P38273 704 aa10.24□□□□□ -0.77
SIM1YIL123W NSG1P38837 291 aa10.24□□□□□ -0.77
SIM1YIL123W NAB3P38996 802 aaKnown RBP RIP-Chip data10.24□□□□□ -0.77not detected
SIM1YIL123W YIL067CP40514 678 aa10.24□□□□□ -0.77
SIM1YIL123W MDV1P47025 714 aa10.24□□□□□ -0.77
SIM1YIL123W IRC18P47056 224 aa10.24□□□□□ -0.77
SIM1YIL123W SAM37P50110 327 aa10.24□□□□□ -0.77
SIM1YIL123W SEH1P53011 349 aaKnown RBP10.24□□□□□ -0.77
SIM1YIL123W MPA43P53583 542 aaPredicted RBP10.24□□□□□ -0.77
SIM1YIL123W YLR460CP54007 376 aa10.24□□□□□ -0.77
SIM1YIL123W TPP1Q03796 238 aa10.24□□□□□ -0.77
SIM1YIL123W QCR7P00128 127 aa10.23□□□□□ -0.77
SIM1YIL123W CAN1P04817 590 aa10.23□□□□□ -0.77
SIM1YIL123W PDE2P06776 526 aa10.23□□□□□ -0.77
SIM1YIL123W RPA135P22138 1203 aaKnown RBP10.23□□□□□ -0.77
SIM1YIL123W FUN19P28003 413 aaPredicted RBP10.23□□□□□ -0.77
SIM1YIL123W PRE2P30656 287 aaKnown RBP10.23□□□□□ -0.77
SIM1YIL123W MKK2P32491 506 aa10.23□□□□□ -0.77
SIM1YIL123W TRS65P32893 560 aa10.23□□□□□ -0.77
SIM1YIL123W GPX1P36014 167 aa10.23□□□□□ -0.77
SIM1YIL123W SDS22P36047 338 aa10.23□□□□□ -0.77
SIM1YIL123W PAU24P38155 120 aa10.23□□□□□ -0.77
SIM1YIL123W MAL32P38158 584 aa10.23□□□□□ -0.77
SIM1YIL123W RTT105P40063 208 aa10.23□□□□□ -0.77
SIM1YIL123W PPT1P53043 513 aa10.23□□□□□ -0.77
SIM1YIL123W MAL12P53341 584 aa10.23□□□□□ -0.77
SIM1YIL123W MSS11Q03825 758 aa10.23□□□□□ -0.77
SIM1YIL123W BUR2Q05949 395 aa10.23□□□□□ -0.77
SIM1YIL123W YLR456WQ06199 204 aa10.23□□□□□ -0.77
SIM1YIL123W YOL036WQ08206 761 aa10.23□□□□□ -0.77
SIM1YIL123W AVO1Q08236 1176 aa10.23□□□□□ -0.77
SIM1YIL123W YDL109CQ12103 647 aa10.23□□□□□ -0.77
SIM1YIL123W YDR061WQ12298 539 aa10.23□□□□□ -0.77
SIM1YIL123W FLP1P03870 423 aa10.22□□□□□ -0.77
SIM1YIL123W GLK1P17709 500 aaKnown RBP10.22□□□□□ -0.77
SIM1YIL123W DOA4P32571 926 aa10.22□□□□□ -0.77
SIM1YIL123W YBR137WP38276 179 aa10.22□□□□□ -0.77
SIM1YIL123W HXT9P40885 567 aa10.22□□□□□ -0.77
SIM1YIL123W HXT11P54862 567 aa10.22□□□□□ -0.77
SIM1YIL123W TAZ1Q06510 381 aa10.22□□□□□ -0.77
SIM1YIL123W MRPL35Q06678 367 aa10.22□□□□□ -0.77
SIM1YIL123W CYK3Q07533 885 aa10.22□□□□□ -0.77
SIM1YIL123W YPL199CQ08954 240 aa10.22□□□□□ -0.77
SIM1YIL123W YPR1Q12458 312 aa10.22□□□□□ -0.77
SIM1YIL123W YLR099W-AQ3E798 87 aa10.22□□□□□ -0.77
SIM1YIL123W NUP1P20676 1076 aa10.21□□□□□ -0.78
SIM1YIL123W MSN4P33749 630 aa10.21□□□□□ -0.78
SIM1YIL123W OCA5P38738 679 aa10.21□□□□□ -0.78
SIM1YIL123W SDP1P40479 209 aa10.21□□□□□ -0.78
SIM1YIL123W VNX1P42839 908 aa10.21□□□□□ -0.78
SIM1YIL123W TPN1P53099 579 aa10.21□□□□□ -0.78
SIM1YIL123W MPP6P53725 186 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms