RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APQ12	YIL040W	YAK1	P14680	807 aa		0.23	□□□□□ -2.37
APQ12	YIL040W	DAP2	P18962	818 aa		0.23	□□□□□ -2.37
APQ12	YIL040W	MRPL20	P22354	195 aa	Predicted RBP	0.23	□□□□□ -2.37
APQ12	YIL040W	URA7	P28274	579 aa	Known RBP	0.23	□□□□□ -2.37
APQ12	YIL040W	YKL187C	P34231	750 aa		0.23	□□□□□ -2.37
APQ12	YIL040W	FCY21	P40039	528 aa		0.23	□□□□□ -2.37
APQ12	YIL040W	LSM4	P40070	187 aa	Known RBP	0.23	□□□□□ -2.37
APQ12	YIL040W	YDR541C	Q03049	344 aa		0.23	□□□□□ -2.37
APQ12	YIL040W	EBS1	Q03466	884 aa	Known RBP	0.23	□□□□□ -2.37
APQ12	YIL040W	TAF11	Q04226	346 aa		0.23	□□□□□ -2.37
APQ12	YIL040W	TIM22	Q12328	207 aa		0.23	□□□□□ -2.37
APQ12	YIL040W	DET1	Q99288	334 aa	Known RBP	0.23	□□□□□ -2.37
APQ12	YIL040W	CPR2	P23285	205 aa		0.22	□□□□□ -2.37
APQ12	YIL040W	RRT12	P25381	491 aa		0.22	□□□□□ -2.37
APQ12	YIL040W	MNL1	P38888	796 aa		0.22	□□□□□ -2.37
APQ12	YIL040W	GPD2	P41911	440 aa	Known RBP	0.22	□□□□□ -2.37
APQ12	YIL040W	YNL320W	P42840	284 aa		0.22	□□□□□ -2.37
APQ12	YIL040W	YJL027C	P47063	138 aa	Predicted RBP	0.22	□□□□□ -2.37
APQ12	YIL040W	UFD1	P53044	361 aa		0.22	□□□□□ -2.37
APQ12	YIL040W	INM2	Q05533	292 aa		0.22	□□□□□ -2.37
APQ12	YIL040W	SUE1	Q06524	206 aa		0.22	□□□□□ -2.37
APQ12	YIL040W	NDL1	Q06568	189 aa		0.22	□□□□□ -2.37
APQ12	YIL040W	RDS3	Q06835	107 aa	Predicted RBP	0.22	□□□□□ -2.37
APQ12	YIL040W	ERP3	Q12403	225 aa		0.22	□□□□□ -2.37
APQ12	YIL040W	PDE2	P06776	526 aa		0.21	□□□□□ -2.38
APQ12	YIL040W	CDC42	P19073	191 aa		0.21	□□□□□ -2.38
APQ12	YIL040W	PRE7	P23724	241 aa	Known RBP	0.21	□□□□□ -2.38
APQ12	YIL040W	VAM7	P32912	316 aa		0.21	□□□□□ -2.38
APQ12	YIL040W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.21	□□□□□ -2.38	not detected
APQ12	YIL040W	LCB2	P40970	561 aa		0.21	□□□□□ -2.38
APQ12	YIL040W	YJR141W	P47172	347 aa	Predicted RBP	0.21	□□□□□ -2.38
APQ12	YIL040W	TAF10	Q12030	206 aa		0.21	□□□□□ -2.38
APQ12	YIL040W	DCP1	Q12517	231 aa	Predicted RBP	0.21	□□□□□ -2.38
APQ12	YIL040W	ERV1	P27882	189 aa		0.2	□□□□□ -2.38
APQ12	YIL040W	EFB1	P32471	206 aa	Known RBP	0.2	□□□□□ -2.38
APQ12	YIL040W	TRM7	P38238	310 aa	Known RBP	0.2	□□□□□ -2.38
APQ12	YIL040W	YHL044W	P38727	235 aa		0.2	□□□□□ -2.38
APQ12	YIL040W	EDC2	P40023	145 aa	Predicted RBP	0.2	□□□□□ -2.38
APQ12	YIL040W	DSE1	P40077	573 aa		0.2	□□□□□ -2.38
APQ12	YIL040W	EPL1	P43572	832 aa		0.2	□□□□□ -2.38
APQ12	YIL040W	PIR5	P46999	287 aa		0.2	□□□□□ -2.38
APQ12	YIL040W	YJR146W	P47174	117 aa		0.2	□□□□□ -2.38
APQ12	YIL040W	NUP57	P48837	541 aa		0.2	□□□□□ -2.38
APQ12	YIL040W	LSG1	P53145	640 aa	Known RBP	0.2	□□□□□ -2.38
APQ12	YIL040W	SPH1	Q06160	661 aa		0.2	□□□□□ -2.38
APQ12	YIL040W	PRR2	Q12310	699 aa		0.2	□□□□□ -2.38
APQ12	YIL040W	RRI2	Q12348	645 aa		0.2	□□□□□ -2.38
APQ12	YIL040W	MHP1	P43638	1398 aa		0.19	□□□□□ -2.38
APQ12	YIL040W	HIS3	P06633	220 aa		0.19	□□□□□ -2.38
APQ12	YIL040W	ZWF1	P11412	505 aa	Known RBP	0.19	□□□□□ -2.38
APQ12	YIL040W	VPS1	P21576	704 aa	Known RBP	0.19	□□□□□ -2.38
APQ12	YIL040W	MPE1	P35728	441 aa	Known RBP	0.19	□□□□□ -2.38
APQ12	YIL040W	KAP104	P38217	918 aa	Known RBP	0.19	□□□□□ -2.38
APQ12	YIL040W	SRP72	P38688	640 aa	Known RBP	0.19	□□□□□ -2.38
APQ12	YIL040W	YHR045W	P38775	560 aa		0.19	□□□□□ -2.38
APQ12	YIL040W	LYS12	P40495	371 aa	Known RBP	0.19	□□□□□ -2.38
APQ12	YIL040W	TCB2	P48231	1178 aa		0.19	□□□□□ -2.38
APQ12	YIL040W	MDM1	Q01846	1127 aa		0.19	□□□□□ -2.38
APQ12	YIL040W	SPO77	Q06134	477 aa		0.19	□□□□□ -2.38
APQ12	YIL040W	EMC6	Q12431	108 aa		0.19	□□□□□ -2.38
APQ12	YIL040W	PFK27	Q12471	397 aa	Predicted RBP	0.19	□□□□□ -2.38
APQ12	YIL040W	ADK2	P26364	225 aa		0.18	□□□□□ -2.38
APQ12	YIL040W	YHR177W	P38867	453 aa		0.18	□□□□□ -2.38
APQ12	YIL040W	LSM5	P40089	93 aa	Known RBP	0.18	□□□□□ -2.38
APQ12	YIL040W	PMT4	P46971	762 aa		0.18	□□□□□ -2.38
APQ12	YIL040W	LST7	P53237	242 aa		0.18	□□□□□ -2.38
APQ12	YIL040W	TPC1	P53257	314 aa		0.18	□□□□□ -2.38
APQ12	YIL040W	CIK1	Q01649	594 aa		0.18	□□□□□ -2.38
APQ12	YIL040W	ERB1	Q04660	807 aa	Known RBP	0.18	□□□□□ -2.38
APQ12	YIL040W	YOL075C	Q08234	1294 aa		0.18	□□□□□ -2.38
APQ12	YIL040W	UAF30	Q08747	228 aa		0.18	□□□□□ -2.38
APQ12	YIL040W	YPL150W	Q12152	901 aa		0.18	□□□□□ -2.38
APQ12	YIL040W	RPN5	Q12250	445 aa	Known RBP	0.18	□□□□□ -2.38
APQ12	YIL040W	BOL1	Q3E793	110 aa		0.18	□□□□□ -2.38
APQ12	YIL040W	TDH1	P00360	332 aa	Known RBP	0.17	□□□□□ -2.38
APQ12	YIL040W	CBP2	P03874	630 aa	Predicted RBP	0.17	□□□□□ -2.38
APQ12	YIL040W	VPH2	P32341	215 aa		0.17	□□□□□ -2.38
APQ12	YIL040W	SPP381	P38282	291 aa	Predicted RBP	0.17	□□□□□ -2.38
APQ12	YIL040W	MND1	P53102	219 aa		0.17	□□□□□ -2.38
APQ12	YIL040W	YGR111W	P53265	400 aa		0.17	□□□□□ -2.38
APQ12	YIL040W	RSM27	P53305	110 aa		0.17	□□□□□ -2.38
APQ12	YIL040W	COS6	P53344	381 aa		0.17	□□□□□ -2.38
APQ12	YIL040W	RET3	P53600	189 aa		0.17	□□□□□ -2.38
APQ12	YIL040W	BIO4	P53630	237 aa		0.17	□□□□□ -2.38
APQ12	YIL040W	ALG9	P53868	555 aa	Known RBP	0.17	□□□□□ -2.38
APQ12	YIL040W	MEH1	Q02205	184 aa		0.17	□□□□□ -2.38
APQ12	YIL040W	SMP3	Q04174	516 aa		0.17	□□□□□ -2.38
APQ12	YIL040W	YLR287C	Q05881	355 aa		0.17	□□□□□ -2.38
APQ12	YIL040W	IPK1	Q06667	281 aa		0.17	□□□□□ -2.38
APQ12	YIL040W	UBR2	Q07963	1872 aa		0.17	□□□□□ -2.38
APQ12	YIL040W	RPN6	Q12377	434 aa		0.17	□□□□□ -2.38
APQ12	YIL040W	ISA2	Q12425	185 aa		0.17	□□□□□ -2.38
APQ12	YIL040W	DPM1	P14020	267 aa	Known RBP	0.16	□□□□□ -2.38
APQ12	YIL040W	LTV1	P34078	463 aa		0.16	□□□□□ -2.38
APQ12	YIL040W	MMS21	P38632	267 aa		0.16	□□□□□ -2.38
APQ12	YIL040W	LCP5	P40079	357 aa	Predicted RBP	0.16	□□□□□ -2.38
APQ12	YIL040W	AYR1	P40471	297 aa		0.16	□□□□□ -2.38
APQ12	YIL040W	MPS2	P53159	387 aa		0.16	□□□□□ -2.38
APQ12	YIL040W	RSC1	P53236	928 aa		0.16	□□□□□ -2.38
APQ12	YIL040W	SLM2	P53955	656 aa		0.16	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms