RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	MER1	P16523	270 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	UTR1	P21373	530 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	YCP4	P25349	247 aa	Known RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	YUR1	P26725	428 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	MRPL9	P31334	269 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	MSS51	P32335	436 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	ACP1	P32463	125 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	MTC2	P34246	357 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
XKS1	YGR194C	TUL1	P36096	758 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	DRE2	P36152	348 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	APE3	P37302	537 aa	Known RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	SHE1	P38200	338 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	LDB7	P38210	180 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	ZTA1	P38230	334 aa	Known RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	KSP1	P38691	1029 aa	Known RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	SHR5	P41912	237 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	YGR201C	P42936	225 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	MCM22	P47167	239 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	SCS3	P53012	380 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	TRM112	P53738	135 aa	Predicted RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	GOR1	P53839	350 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	YNL260C	P53846	198 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	IGO1	P53897	168 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	YNL143C	P53908	130 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	YNL140C	P53910	189 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	KAP120	Q02932	1032 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	MSS11	Q03825	758 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	CTK1	Q03957	528 aa	Known RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	VBA1	Q04301	562 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	ASM4	Q05166	528 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	UTP21	Q06078	939 aa	Predicted RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	YLR173W	Q06247	608 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	YOR289W	Q12012	251 aa	Predicted RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	YDR056C	Q12025	205 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	SFM1	Q12314	213 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	RKM5	Q12367	367 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	MHT1	Q12525	324 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	PCC1	Q3E833	88 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	YOS9	Q99220	542 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	ISN1	Q99312	450 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	DIF1	O13577	133 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	GAL80	P04387	435 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	AAC3	P18238	307 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	DAL81	P21657	970 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	SIF2	P38262	535 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	RTC2	P38279	296 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	GND1	P38720	489 aa	Known RBP	4.06	□□□□□ -1.76
XKS1	YGR194C	UTP25	P40498	721 aa	Known RBP	4.06	□□□□□ -1.76
XKS1	YGR194C	HIS6	P40545	261 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	GTT1	P40582	234 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	CIN1	P40987	1014 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	PFS2	P42841	465 aa	Known RBP	4.06	□□□□□ -1.76
XKS1	YGR194C	PAM16	P42949	149 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	DPB11	P47027	764 aa	Predicted RBP	4.06	□□□□□ -1.76
XKS1	YGR194C	YJL016W	P47072	561 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	AIM25	P47140	327 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	STE24	P47154	453 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	SNN1	P48232	102 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	COS10	P52924	374 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	ASI3	P53983	676 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	RIM13	Q03792	727 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	ATG38	Q05789	226 aa	Known RBP	4.06	□□□□□ -1.76
XKS1	YGR194C	YLR036C	Q07986	203 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	PLB3	Q08108	686 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	YPL245W	Q12179	454 aa	Known RBP	4.06	□□□□□ -1.76
XKS1	YGR194C	RGT2	Q12300	763 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	YOL114C	Q12322	202 aa		4.06	□□□□□ -1.76
XKS1	YGR194C	ERD2	P18414	219 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	YCR061W	P25639	631 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	ATP11	P32453	318 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	KRE6	P32486	720 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	SIP1	P32578	815 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	LOT5	P34234	306 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	RMA1	P36001	430 aa	Known RBP	4.05	□□□□□ -1.76
XKS1	YGR194C	YPT52	P36018	234 aa	Known RBP	4.05	□□□□□ -1.76
XKS1	YGR194C	RPF2	P36160	344 aa	Known RBP	4.05	□□□□□ -1.76
XKS1	YGR194C	IMD2	P38697	523 aa	Known RBP	4.05	□□□□□ -1.76
XKS1	YGR194C	UBA4	P38820	440 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	AIM2	P39721	246 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	IDS2	P46958	469 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	MUP1	P50276	574 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	GPG1	P53130	126 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	RTS3	P53289	263 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	YNL134C	P53912	376 aa	Known RBP	4.05	□□□□□ -1.76
XKS1	YGR194C	AAT1	Q01802	451 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	ARL3	Q02804	198 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	RRP45	Q05636	305 aa	Known RBP	4.05	□□□□□ -1.76
XKS1	YGR194C	ICL2	Q12031	575 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	YPR022C	Q12139	1133 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	DGK1	Q12382	290 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	ECM29	P38737	1868 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	RPS9B	P05755	195 aa	Known RBP	4.05	□□□□□ -1.76
XKS1	YGR194C	NHP6B	P11633	99 aa	Known RBP	4.05	□□□□□ -1.76
XKS1	YGR194C	SCH9	P11792	824 aa	Known RBP	4.05	□□□□□ -1.76
XKS1	YGR194C	SNF6	P18888	332 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	STE50	P25344	346 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	AHC2	P25649	128 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	PRE4	P30657	266 aa		4.05	□□□□□ -1.76
XKS1	YGR194C	MRP20	P32387	263 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms