RNA–Protein interactions for RNA: YGR089W

NNF2, Transcript of Protein that exhibits physical and genetic interactions with Rpb8p, yeast

Gene NNF2, Length 2,811 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NNF2	YGR089W	YDR222W	Q04925	415 aa		0.39	□□□□□ -2.35
NNF2	YGR089W	ECM19	Q06011	112 aa		0.39	□□□□□ -2.35
NNF2	YGR089W	PRP46	Q12417	451 aa	Predicted RBP	0.39	□□□□□ -2.35
NNF2	YGR089W	DFM1	Q12743	341 aa	Known RBP	0.39	□□□□□ -2.35
NNF2	YGR089W	UBA3	Q99344	299 aa		0.39	□□□□□ -2.35
NNF2	YGR089W	ECM5	Q03214	1411 aa		0.39	□□□□□ -2.35
NNF2	YGR089W	BPT1	P14772	1559 aa		0.39	□□□□□ -2.35
NNF2	YGR089W	YOR1	P53049	1477 aa		0.39	□□□□□ -2.35
NNF2	YGR089W	DAL81	P21657	970 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	MIG1	P27705	504 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	MKK1	P32490	508 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	YFR018C	P43599	363 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	SPC19	Q03954	165 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	YMR244W	Q04018	355 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	UTP15	Q04305	513 aa	Known RBP	0.38	□□□□□ -2.35
NNF2	YGR089W	DIB1	Q06819	143 aa	Predicted RBP	0.38	□□□□□ -2.35
NNF2	YGR089W	ALE1	Q08548	619 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	SPE3	Q12074	293 aa	Known RBP	0.38	□□□□□ -2.35
NNF2	YGR089W	RPN5	Q12250	445 aa	Known RBP	0.38	□□□□□ -2.35
NNF2	YGR089W	BEM2	P39960	2167 aa	Known RBP	0.38	□□□□□ -2.35
NNF2	YGR089W	ATG2	P53855	1592 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	RIM15	P43565	1770 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	RPS16A	P0CX51	143 aa	Known RBP	0.38	□□□□□ -2.35
NNF2	YGR089W	RPS16B	P0CX52	143 aa	Known RBP	0.38	□□□□□ -2.35
NNF2	YGR089W	DBR1	P24309	405 aa	Known RBP	0.38	□□□□□ -2.35
NNF2	YGR089W	PHO84	P25297	587 aa	Known RBP	0.38	□□□□□ -2.35
NNF2	YGR089W	URA10	P30402	227 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	ZRT3	P34240	503 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	EFM1	P38732	585 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	YPT35	P38815	214 aa	Known RBP	0.38	□□□□□ -2.35
NNF2	YGR089W	ATG7	P38862	630 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	YHR182W	P38870	785 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	SMC2	P38989	1170 aa	Known RBP	0.38	□□□□□ -2.35
NNF2	YGR089W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.38	□□□□□ -2.35	not detected
NNF2	YGR089W	LCP5	P40079	357 aa	Predicted RBP	0.38	□□□□□ -2.35
NNF2	YGR089W	LYS12	P40495	371 aa	Known RBP	0.38	□□□□□ -2.35
NNF2	YGR089W	EFM4	P40516	257 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	0.38	□□□□□ -2.35	not detected
NNF2	YGR089W	YGL088W	P53151	121 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	RET3	P53600	189 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	SUB1	P54000	292 aa	Known RBP	0.38	□□□□□ -2.35
NNF2	YGR089W	YPL113C	Q02961	396 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	INP1	Q03694	420 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	GCN2	P15442	1659 aa		0.38	□□□□□ -2.35
NNF2	YGR089W	VPS63	O13549	108 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	TDH2	P00358	332 aa	Known RBP	0.37	□□□□□ -2.35
NNF2	YGR089W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.37	□□□□□ -2.35	not detected
NNF2	YGR089W	HPR1	P17629	752 aa	Known RBP	0.37	□□□□□ -2.35
NNF2	YGR089W	PSO2	P30620	661 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	YPS1	P32329	569 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	SRP72	P38688	640 aa	Known RBP	0.37	□□□□□ -2.35
NNF2	YGR089W	ASG7	P46993	209 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	HSH155	P49955	971 aa	Known RBP	0.37	□□□□□ -2.35
NNF2	YGR089W	SHE4	P51534	789 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	LSG1	P53145	640 aa	Known RBP	0.37	□□□□□ -2.35
NNF2	YGR089W	NRM1	P53718	249 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	RGM1	Q00453	211 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	GYL1	Q04322	720 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	AIM33	Q04516	312 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	YOL075C	Q08234	1294 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	CLP1	Q08685	445 aa	Predicted RBP	0.37	□□□□□ -2.35
NNF2	YGR089W	RPN8	Q08723	338 aa	Known RBP	0.37	□□□□□ -2.35
NNF2	YGR089W	YPL264C	Q08980	353 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	TAF10	Q12030	206 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	SGT2	Q12118	346 aa	Known RBP	0.37	□□□□□ -2.35
NNF2	YGR089W	SRN2	Q99176	213 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	NUP192	P47054	1683 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	MET2	P08465	486 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	KRE1	P17260	313 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	MSK1	P32048	576 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	EFB1	P32471	206 aa	Known RBP	0.37	□□□□□ -2.35
NNF2	YGR089W	YKL071W	P36086	256 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	IST2	P38250	946 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	ATG12	P38316	186 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	RCK1	P38622	512 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	YCH1	P42937	148 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	CAX4	P53223	239 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	LST7	P53237	242 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	TPC1	P53257	314 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	CIK1	Q01649	594 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	DXO1	Q06349	442 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	RPN6	Q12377	434 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	RKR1	Q04781	1562 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	SNF6	P18888	332 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	INO2	P26798	304 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	ARO4	P32449	370 aa	Known RBP	0.37	□□□□□ -2.35
NNF2	YGR089W	YKR032W	P36127	104 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	YBL081W	P38180	368 aa	Known RBP	0.37	□□□□□ -2.35
NNF2	YGR089W	RFT1	P38206	574 aa	Predicted RBP	0.37	□□□□□ -2.35
NNF2	YGR089W	MED6	P38782	295 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	YER084W	P40057	128 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	EPL1	P43572	832 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	YFR045W	P43617	309 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	YPL080C	Q02826	108 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	CSM3	Q04659	317 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	ARR1	Q06596	294 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	RLP24	Q07915	199 aa	Known RBP	0.37	□□□□□ -2.35
NNF2	YGR089W	PEX27	Q08580	376 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	YPR063C	Q12160	140 aa		0.37	□□□□□ -2.35
NNF2	YGR089W	AIM45	Q12480	344 aa	Known RBP	0.37	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms