RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C OCA2P53949 197 aa0.74□□□□□ -2.29
SEC1YDR164C YNL033WP53964 284 aa0.74□□□□□ -2.29
SEC1YDR164C YNL019CP53975 284 aa0.74□□□□□ -2.29
SEC1YDR164C CDC14Q00684 551 aa0.74□□□□□ -2.29
SEC1YDR164C PRP38Q00723 242 aaPredicted RBP0.74□□□□□ -2.29
SEC1YDR164C YMR099CQ03161 297 aaKnown RBP0.74□□□□□ -2.29
SEC1YDR164C RLI1Q03195 608 aaKnown RBP0.74□□□□□ -2.29
SEC1YDR164C PLP1Q04004 230 aa0.74□□□□□ -2.29
SEC1YDR164C PEX12Q04370 399 aa0.74□□□□□ -2.29
SEC1YDR164C KRE28Q04431 385 aa0.74□□□□□ -2.29
SEC1YDR164C GLO2Q05584 274 aa0.74□□□□□ -2.29
SEC1YDR164C MDM30Q05930 598 aa0.74□□□□□ -2.29
SEC1YDR164C DCS1Q06151 350 aa0.74□□□□□ -2.29
SEC1YDR164C YLR456WQ06199 204 aa0.74□□□□□ -2.29
SEC1YDR164C DBP9Q06218 594 aaKnown RBP0.74□□□□□ -2.29
SEC1YDR164C PML1Q07930 204 aaPredicted RBP0.74□□□□□ -2.29
SEC1YDR164C THP1Q08231 455 aa0.74□□□□□ -2.29
SEC1YDR164C SLD7Q08457 257 aa0.74□□□□□ -2.29
SEC1YDR164C YOR387CQ08910 206 aa0.74□□□□□ -2.29
SEC1YDR164C RKM1Q08961 583 aaPredicted RBP0.74□□□□□ -2.29
SEC1YDR164C GPM2Q12008 311 aa0.74□□□□□ -2.29
SEC1YDR164C REX3Q12090 404 aa0.74□□□□□ -2.29
SEC1YDR164C SGT2Q12118 346 aaKnown RBP0.74□□□□□ -2.29
SEC1YDR164C VAM3Q12241 283 aa0.74□□□□□ -2.29
SEC1YDR164C RPN6Q12377 434 aa0.74□□□□□ -2.29
SEC1YDR164C RRP36Q12481 300 aaPredicted RBP0.74□□□□□ -2.29
SEC1YDR164C NOT5Q12514 560 aaPredicted RBP0.74□□□□□ -2.29
SEC1YDR164C IZH4Q99393 312 aa0.74□□□□□ -2.29
SEC1YDR164C COX3P00420 269 aa0.73□□□□□ -2.29
SEC1YDR164C MES1P00958 751 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C HEM2P05373 342 aa0.73□□□□□ -2.29
SEC1YDR164C GPH1P06738 902 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C STE3P06783 470 aa0.73□□□□□ -2.29
SEC1YDR164C GRX2P17695 143 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C GLK1P17709 500 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C SPO7P18410 259 aa0.73□□□□□ -2.29
SEC1YDR164C ATP10P18496 279 aa0.73□□□□□ -2.29
SEC1YDR164C SAR1P20606 190 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C UBA1P22515 1024 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C PHO84P25297 587 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C CTR86P25355 563 aa0.73□□□□□ -2.29
SEC1YDR164C RAD51P25454 400 aa0.73□□□□□ -2.29
SEC1YDR164C YCR090CP25654 182 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C BUB2P26448 306 aaPredicted RBP0.73□□□□□ -2.29
SEC1YDR164C ERG9P29704 444 aa0.73□□□□□ -2.29
SEC1YDR164C AFG1P32317 509 aa0.73□□□□□ -2.29
SEC1YDR164C KAR9P32526 644 aa0.73□□□□□ -2.29
SEC1YDR164C SMI1P32566 505 aa0.73□□□□□ -2.29
SEC1YDR164C ARC19P33204 171 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C TKL2P33315 681 aa0.73□□□□□ -2.29
SEC1YDR164C PAD1P33751 242 aaKnown RBP RIP-Chip data0.73□□□□□ -2.29not detected
SEC1YDR164C TPO5P36029 618 aa0.73□□□□□ -2.29
SEC1YDR164C DAD2P36162 133 aa0.73□□□□□ -2.29
SEC1YDR164C BNA4P38169 460 aa0.73□□□□□ -2.29
SEC1YDR164C MRP21P38175 177 aa0.73□□□□□ -2.29
SEC1YDR164C ZTA1P38230 334 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C SHE3P38272 425 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C NTC20P38302 140 aaPredicted RBP0.73□□□□□ -2.29
SEC1YDR164C YHL026CP38740 315 aa0.73□□□□□ -2.29
SEC1YDR164C SBE22P38814 852 aa0.73□□□□□ -2.29
SEC1YDR164C AIM18P38884 321 aa0.73□□□□□ -2.29
SEC1YDR164C MLH1P38920 769 aa0.73□□□□□ -2.29
SEC1YDR164C PCF11P39081 626 aaPredicted RBP0.73□□□□□ -2.29
SEC1YDR164C PHO90P39535 881 aa0.73□□□□□ -2.29
SEC1YDR164C AIM2P39721 246 aa0.73□□□□□ -2.29
SEC1YDR164C RBG1P39729 369 aa0.73□□□□□ -2.29
SEC1YDR164C RPH1P39956 796 aa0.73□□□□□ -2.29
SEC1YDR164C EDC3P39998 551 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C AVT6P40074 448 aa0.73□□□□□ -2.29
SEC1YDR164C YER186CP40101 306 aa0.73□□□□□ -2.29
SEC1YDR164C RIO2P40160 425 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C SOK1P40317 901 aa0.73□□□□□ -2.29
SEC1YDR164C VHS2P40463 436 aa0.73□□□□□ -2.29
SEC1YDR164C SYG1P40528 902 aa0.73□□□□□ -2.29
SEC1YDR164C GCN20P43535 752 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C ALK1P43633 760 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C SNG1P46950 547 aa0.73□□□□□ -2.29
SEC1YDR164C AIM23P47015 356 aa0.73□□□□□ -2.29
SEC1YDR164C TIS11P47977 285 aa0.73□□□□□ -2.29
SEC1YDR164C GTO1P48239 356 aa0.73□□□□□ -2.29
SEC1YDR164C VMA10P48836 114 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C OCA1P50946 238 aaPredicted RBP0.73□□□□□ -2.29
SEC1YDR164C BOL2P53082 120 aa0.73□□□□□ -2.29
SEC1YDR164C GET1P53192 235 aa0.73□□□□□ -2.29
SEC1YDR164C COG7P53195 279 aa0.73□□□□□ -2.29
SEC1YDR164C NOP19P53317 196 aaPredicted RBP0.73□□□□□ -2.29
SEC1YDR164C SMM1P53720 384 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C YNL260CP53846 198 aa0.73□□□□□ -2.29
SEC1YDR164C DSL1P53847 754 aa0.73□□□□□ -2.29
SEC1YDR164C PDR16P53860 351 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C DUG3P53871 357 aa0.73□□□□□ -2.29
SEC1YDR164C YNL143CP53908 130 aa0.73□□□□□ -2.29
SEC1YDR164C YNL140CP53910 189 aa0.73□□□□□ -2.29
SEC1YDR164C TPS1Q00764 495 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C YVH1Q02256 364 aaKnown RBP0.73□□□□□ -2.29
SEC1YDR164C YPL014WQ02606 381 aa0.73□□□□□ -2.29
SEC1YDR164C NHP10Q03435 203 aa0.73□□□□□ -2.29
SEC1YDR164C HER2Q03557 464 aa0.73□□□□□ -2.29
SEC1YDR164C INP1Q03694 420 aa0.73□□□□□ -2.29
SEC1YDR164C TVP15Q03860 143 aa0.73□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms