RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	GEP4	P38812	185 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	YHR182W	P38870	785 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	UBP5	P39944	805 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	SLM1	P40485	686 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	KEG1	P43614	200 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	GUF1	P46943	645 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	STP1	Q00947	519 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	RSC9	Q03124	581 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	BNA7	Q04066	261 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	ORM2	Q06144	216 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	SMD2	Q06217	110 aa	Known RBP	4.68	□□□□□ -1.66
LCB2	YDR062W	GAT3	Q07928	141 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	SDO1	Q07953	250 aa	Known RBP	4.68	□□□□□ -1.66
LCB2	YDR062W	ALE1	Q08548	619 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	APC9	Q12107	265 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	ERP3	Q12403	225 aa		4.68	□□□□□ -1.66
LCB2	YDR062W	DET1	Q99288	334 aa	Known RBP	4.68	□□□□□ -1.66
LCB2	YDR062W	MET16	P18408	261 aa	Predicted RBP	4.67	□□□□□ -1.66
LCB2	YDR062W	VPS1	P21576	704 aa	Known RBP	4.67	□□□□□ -1.66
LCB2	YDR062W	DAL82	P21705	255 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	MKK1	P32490	508 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	MAL32	P38158	584 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	RRP3	P38712	501 aa	Known RBP	4.67	□□□□□ -1.66
LCB2	YDR062W	COA1	P40452	197 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	YGR210C	P42942	411 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	SNO3	P43544	222 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	SFH5	P47008	294 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	MAL12	P53341	584 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	MRPL50	P53724	139 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	SLT2	Q00772	484 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	SED5	Q01590	340 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	SNZ1	Q03148	297 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	ATP6	P00854	259 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	CAP2	P13517	287 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	EXG1	P23776	448 aa	Known RBP	4.67	□□□□□ -1.66
LCB2	YDR062W	GLC7	P32598	312 aa	Known RBP	4.67	□□□□□ -1.66
LCB2	YDR062W	DTR1	P38125	572 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	MST28	P39552	234 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	YRB2	P40517	327 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	YCH1	P42937	148 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	TRF5	P48561	642 aa	Known RBP	4.67	□□□□□ -1.66
LCB2	YDR062W	AVT4	P50944	713 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	HOP2	P53187	214 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	POP6	P53218	158 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
LCB2	YDR062W	ESBP6	P53918	673 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	CCE1	Q03702	353 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	SMC5	Q08204	1093 aa		4.67	□□□□□ -1.66
LCB2	YDR062W	NHP6B	P11633	99 aa	Known RBP	4.66	□□□□□ -1.66
LCB2	YDR062W	RPS5	P26783	225 aa	Known RBP	4.66	□□□□□ -1.66
LCB2	YDR062W	PPA2	P28239	310 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	ITR2	P30606	609 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	TIR2	P33890	251 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	SCO2	P38072	301 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	YHK8	P38776	514 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	CFD1	P40558	293 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	HIT1	P46973	164 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	CAF40	P53829	373 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	APC1	P53886	1748 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	BCH1	Q05029	724 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	RTT103	Q05543	409 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	GRS2	Q06817	618 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	YEH2	Q07950	538 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	PLP2	Q12017	286 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	SLM3	Q12093	417 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	YLR108C	Q12259	485 aa		4.66	□□□□□ -1.66
LCB2	YDR062W	COQ1	P18900	473 aa		4.65	□□□□□ -1.66
LCB2	YDR062W	SAM2	P19358	384 aa	Known RBP	4.65	□□□□□ -1.66
LCB2	YDR062W	PBN1	P25580	416 aa		4.65	□□□□□ -1.66
LCB2	YDR062W	ZRT1	P32804	376 aa		4.65	□□□□□ -1.66
LCB2	YDR062W	SIP2	P34164	415 aa	Known RBP	4.65	□□□□□ -1.66
LCB2	YDR062W	RPC37	P36121	282 aa		4.65	□□□□□ -1.66
LCB2	YDR062W	CHK1	P38147	527 aa		4.65	□□□□□ -1.66
LCB2	YDR062W	LDB7	P38210	180 aa		4.65	□□□□□ -1.66
LCB2	YDR062W	YPT35	P38815	214 aa	Known RBP	4.65	□□□□□ -1.66
LCB2	YDR062W	YFL040W	P43562	540 aa		4.65	□□□□□ -1.66
LCB2	YDR062W	RRT5	P43607	289 aa		4.65	□□□□□ -1.66
LCB2	YDR062W	TRM112	P53738	135 aa	Predicted RBP	4.65	□□□□□ -1.66
LCB2	YDR062W	ALG11	P53954	548 aa	Known RBP	4.65	□□□□□ -1.66
LCB2	YDR062W	IRC4	Q03036	179 aa		4.65	□□□□□ -1.66
LCB2	YDR062W	MSH5	Q12175	901 aa		4.65	□□□□□ -1.66
LCB2	YDR062W	SNF2	P22082	1703 aa		4.65	□□□□□ -1.67
LCB2	YDR062W	MRP1	P10662	321 aa	Known RBP	4.64	□□□□□ -1.67
LCB2	YDR062W	MBR1	P23493	339 aa		4.64	□□□□□ -1.67
LCB2	YDR062W	TDA11	P38854	504 aa		4.64	□□□□□ -1.67
LCB2	YDR062W	PFS1	P38872	237 aa		4.64	□□□□□ -1.67
LCB2	YDR062W	HAT2	P39984	401 aa		4.64	□□□□□ -1.67
LCB2	YDR062W	YIL024C	P40543	189 aa		4.64	□□□□□ -1.67
LCB2	YDR062W	RTT101	P47050	842 aa		4.64	□□□□□ -1.67
LCB2	YDR062W	YJR030C	P47101	745 aa		4.64	□□□□□ -1.67
LCB2	YDR062W	SLI1	P53304	468 aa		4.64	□□□□□ -1.67
LCB2	YDR062W	OSW1	Q08692	278 aa		4.64	□□□□□ -1.67
LCB2	YDR062W	GET4	Q12125	312 aa		4.64	□□□□□ -1.67
LCB2	YDR062W	RHO1	P06780	209 aa	Known RBP	4.64	□□□□□ -1.67
LCB2	YDR062W	RPL42A	P0CX27	106 aa	Known RBP	4.64	□□□□□ -1.67
LCB2	YDR062W	RPL42B	P0CX28	106 aa	Known RBP	4.64	□□□□□ -1.67
LCB2	YDR062W	HPR1	P17629	752 aa	Known RBP	4.64	□□□□□ -1.67
LCB2	YDR062W	YAP1	P19880	650 aa	Known RBP	4.64	□□□□□ -1.67
LCB2	YDR062W	ZRC1	P20107	442 aa		4.64	□□□□□ -1.67
LCB2	YDR062W	SLY1	P22213	666 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms