RNA–Protein interactions for RNA: YDL240C-A

YDL240C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YDL240C-A, Length 138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDL240C-AYDL240C-A PHO80P20052 293 aa0.72□□□□□ -2.29
YDL240C-AYDL240C-A CLB6P32943 380 aa0.72□□□□□ -2.29
YDL240C-AYDL240C-A SLM1P40485 686 aa0.72□□□□□ -2.29
YDL240C-AYDL240C-A YFR054CP43622 192 aa0.72□□□□□ -2.29
YDL240C-AYDL240C-A DSK2P48510 373 aa0.72□□□□□ -2.29
YDL240C-AYDL240C-A YOL075CQ08234 1294 aa0.72□□□□□ -2.29
YDL240C-AYDL240C-A DCI1Q08558 271 aa0.72□□□□□ -2.29
YDL240C-AYDL240C-A FUR1P18562 216 aaKnown RBP0.71□□□□□ -2.3
YDL240C-AYDL240C-A VAM7P32912 316 aa0.71□□□□□ -2.3
YDL240C-AYDL240C-A SMF2P38778 549 aa0.71□□□□□ -2.3
YDL240C-AYDL240C-A DSE1P40077 573 aa0.71□□□□□ -2.3
YDL240C-AYDL240C-A LCB2P40970 561 aa0.71□□□□□ -2.3
YDL240C-AYDL240C-A YNL040WP53960 456 aaPredicted RBP0.71□□□□□ -2.3
YDL240C-AYDL240C-A RRB1Q04225 511 aaKnown RBP0.71□□□□□ -2.3
YDL240C-AYDL240C-A YHR086W-AQ3E746 53 aa0.71□□□□□ -2.3
YDL240C-AYDL240C-A TFS1P14306 219 aa0.7□□□□□ -2.3
YDL240C-AYDL240C-A CDC42P19073 191 aa0.7□□□□□ -2.3
YDL240C-AYDL240C-A FAR1P21268 830 aa0.7□□□□□ -2.3
YDL240C-AYDL240C-A LYS12P40495 371 aaKnown RBP0.7□□□□□ -2.3
YDL240C-AYDL240C-A YNL320WP42840 284 aa0.7□□□□□ -2.3
YDL240C-AYDL240C-A TPC1P53257 314 aa0.7□□□□□ -2.3
YDL240C-AYDL240C-A SSU72P53538 206 aaPredicted RBP0.7□□□□□ -2.3
YDL240C-AYDL240C-A ACT1P60010 375 aaKnown RBP0.7□□□□□ -2.3
YDL240C-AYDL240C-A IPK1Q06667 281 aa0.7□□□□□ -2.3
YDL240C-AYDL240C-A RDS3Q06835 107 aaPredicted RBP0.7□□□□□ -2.3
YDL240C-AYDL240C-A CDC31P06704 161 aaKnown RBP0.69□□□□□ -2.3
YDL240C-AYDL240C-A DAP2P18962 818 aa0.69□□□□□ -2.3
YDL240C-AYDL240C-A PRE7P23724 241 aaKnown RBP0.69□□□□□ -2.3
YDL240C-AYDL240C-A SRP72P38688 640 aaKnown RBP0.69□□□□□ -2.3
YDL240C-AYDL240C-A EPL1P43572 832 aa0.69□□□□□ -2.3
YDL240C-AYDL240C-A VPS68Q12016 184 aa0.69□□□□□ -2.3
YDL240C-AYDL240C-A MDH1P17505 334 aaKnown RBP RIP-Chip data0.68□□□□□ -2.3not detected
YDL240C-AYDL240C-A LSG1P53145 640 aaKnown RBP0.68□□□□□ -2.3
YDL240C-AYDL240C-A LST7P53237 242 aa0.68□□□□□ -2.3
YDL240C-AYDL240C-A UBX2Q04228 584 aa0.68□□□□□ -2.3
YDL240C-AYDL240C-A RPN6Q12377 434 aa0.68□□□□□ -2.3
YDL240C-AYDL240C-A MHP1P43638 1398 aa0.68□□□□□ -2.3
YDL240C-AYDL240C-A CSE1P33307 960 aa0.67□□□□□ -2.3
YDL240C-AYDL240C-A LTV1P34078 463 aa0.67□□□□□ -2.3
YDL240C-AYDL240C-A CAB3P36076 571 aa0.67□□□□□ -2.3
YDL240C-AYDL240C-A ATG7P38862 630 aa0.67□□□□□ -2.3
YDL240C-AYDL240C-A SDS23P53172 527 aa0.67□□□□□ -2.3
YDL240C-AYDL240C-A TRM10Q12400 293 aa0.67□□□□□ -2.3
YDL240C-AYDL240C-A YOL163WP0CF20 169 aa0.66□□□□□ -2.3
YDL240C-AYDL240C-A PDX1P16451 410 aa0.66□□□□□ -2.3
YDL240C-AYDL240C-A EFB1P32471 206 aaKnown RBP0.66□□□□□ -2.3
YDL240C-AYDL240C-A YKL187CP34231 750 aa0.66□□□□□ -2.3
YDL240C-AYDL240C-A PIR5P46999 287 aa0.66□□□□□ -2.3
YDL240C-AYDL240C-A RET3P53600 189 aa0.66□□□□□ -2.3
YDL240C-AYDL240C-A RMT2Q03305 412 aa0.66□□□□□ -2.3
YDL240C-AYDL240C-A YMR166CQ03829 368 aa0.66□□□□□ -2.3
YDL240C-AYDL240C-A YPR078CQ06813 372 aa0.66□□□□□ -2.3
YDL240C-AYDL240C-A TIM22Q12328 207 aa0.66□□□□□ -2.3
YDL240C-AYDL240C-A YOR012WQ12351 137 aa0.66□□□□□ -2.3
YDL240C-AYDL240C-A YAK1P14680 807 aa0.65□□□□□ -2.31
YDL240C-AYDL240C-A DBR1P24309 405 aaKnown RBP0.65□□□□□ -2.31
YDL240C-AYDL240C-A RPC53P25441 422 aa0.65□□□□□ -2.31
YDL240C-AYDL240C-A PMT4P46971 762 aa0.65□□□□□ -2.31
YDL240C-AYDL240C-A AQR1P53943 586 aa0.65□□□□□ -2.31
YDL240C-AYDL240C-A MIM1Q08176 113 aa0.65□□□□□ -2.31
YDL240C-AYDL240C-A ERP3Q12403 225 aa0.65□□□□□ -2.31
YDL240C-AYDL240C-A EDC2P40023 145 aaPredicted RBP0.64□□□□□ -2.31
YDL240C-AYDL240C-A UFD1P53044 361 aa0.64□□□□□ -2.31
YDL240C-AYDL240C-A AIM33Q04516 312 aa0.64□□□□□ -2.31
YDL240C-AYDL240C-A DCR2Q05924 578 aa0.64□□□□□ -2.31
YDL240C-AYDL240C-A TY3A-GQ12173 290 aa0.64□□□□□ -2.31
YDL240C-AYDL240C-A GPM3Q12326 303 aa0.64□□□□□ -2.31
YDL240C-AYDL240C-A TY3A-IQ99219 290 aa0.64□□□□□ -2.31
YDL240C-AYDL240C-A INH1P01097 85 aa0.63□□□□□ -2.31
YDL240C-AYDL240C-A MSK1P32048 576 aa0.63□□□□□ -2.31
YDL240C-AYDL240C-A FCY21P40039 528 aa0.63□□□□□ -2.31
YDL240C-AYDL240C-A YJR146WP47174 117 aa0.63□□□□□ -2.31
YDL240C-AYDL240C-A CSM3Q04659 317 aa0.63□□□□□ -2.31
YDL240C-AYDL240C-A SPH1Q06160 661 aa0.63□□□□□ -2.31
YDL240C-AYDL240C-A SUE1Q06524 206 aa0.63□□□□□ -2.31
YDL240C-AYDL240C-A RPS16AP0CX51 143 aaKnown RBP0.62□□□□□ -2.31
YDL240C-AYDL240C-A RPS16BP0CX52 143 aaKnown RBP0.62□□□□□ -2.31
YDL240C-AYDL240C-A SCO1P23833 295 aa0.62□□□□□ -2.31
YDL240C-AYDL240C-A LCP5P40079 357 aaPredicted RBP0.62□□□□□ -2.31
YDL240C-AYDL240C-A ISA2Q12425 185 aa0.62□□□□□ -2.31
YDL240C-AYDL240C-A SRN2Q99176 213 aa0.62□□□□□ -2.31
YDL240C-AYDL240C-A CBP2P03874 630 aaPredicted RBP0.61□□□□□ -2.31
YDL240C-AYDL240C-A MRPS5P33759 307 aa0.61□□□□□ -2.31
YDL240C-AYDL240C-A MLH1P38920 769 aa0.61□□□□□ -2.31
YDL240C-AYDL240C-A LSM4P40070 187 aaKnown RBP0.61□□□□□ -2.31
YDL240C-AYDL240C-A DCP1Q12517 231 aaPredicted RBP0.61□□□□□ -2.31
YDL240C-AYDL240C-A FSH3Q99369 266 aa0.61□□□□□ -2.31
YDL240C-AYDL240C-A RPL26AP05743 127 aaKnown RBP0.6□□□□□ -2.31
YDL240C-AYDL240C-A YJL027CP47063 138 aaPredicted RBP0.6□□□□□ -2.31
YDL240C-AYDL240C-A MIG2P53035 382 aa0.6□□□□□ -2.31
YDL240C-AYDL240C-A RPL26BP53221 127 aaKnown RBP0.6□□□□□ -2.31
YDL240C-AYDL240C-A PRR2Q12310 699 aa0.6□□□□□ -2.31
YDL240C-AYDL240C-A HIS3P06633 220 aa0.59□□□□□ -2.31
YDL240C-AYDL240C-A PSO2P30620 661 aa0.59□□□□□ -2.31
YDL240C-AYDL240C-A SNL1P40548 159 aa0.59□□□□□ -2.31
YDL240C-AYDL240C-A SMP3Q04174 516 aa0.59□□□□□ -2.31
YDL240C-AYDL240C-A PEX27Q08580 376 aa0.59□□□□□ -2.31
YDL240C-AYDL240C-A RPN5Q12250 445 aaKnown RBP0.59□□□□□ -2.31
YDL240C-AYDL240C-A RPL1AP0CX43 217 aaKnown RBP0.58□□□□□ -2.32
YDL240C-AYDL240C-A RPL1BP0CX44 217 aaKnown RBP0.58□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms