RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C NNT1Q05874 261 aa2.32□□□□□ -2.04
UBX3YDL091C PGC1Q08959 321 aa2.32□□□□□ -2.04
UBX3YDL091C SLF1Q12034 447 aaKnown RBP2.32□□□□□ -2.04
UBX3YDL091C RAD50P12753 1312 aa2.31□□□□□ -2.04
UBX3YDL091C RPL23AP0CX41 137 aaKnown RBP2.31□□□□□ -2.04
UBX3YDL091C RPL23BP0CX42 137 aaKnown RBP2.31□□□□□ -2.04
UBX3YDL091C UNG1P12887 359 aa2.31□□□□□ -2.04
UBX3YDL091C KSS1P14681 368 aa2.31□□□□□ -2.04
UBX3YDL091C GRR1P24814 1151 aa2.31□□□□□ -2.04
UBX3YDL091C CDC10P25342 322 aaKnown RBP2.31□□□□□ -2.04
UBX3YDL091C KRR1P25586 316 aaPredicted RBP2.31□□□□□ -2.04
UBX3YDL091C ITR2P30606 609 aa2.31□□□□□ -2.04
UBX3YDL091C VMA5P31412 392 aaKnown RBP2.31□□□□□ -2.04
UBX3YDL091C SMP1P38128 452 aa2.31□□□□□ -2.04
UBX3YDL091C YBR241CP38142 488 aa2.31□□□□□ -2.04
UBX3YDL091C HSM3P38348 480 aa2.31□□□□□ -2.04
UBX3YDL091C ALP1P38971 573 aa2.31□□□□□ -2.04
UBX3YDL091C POP2P39008 433 aa2.31□□□□□ -2.04
UBX3YDL091C PRP39P39682 629 aaKnown RBP2.31□□□□□ -2.04
UBX3YDL091C YMR134WP40207 237 aa2.31□□□□□ -2.04
UBX3YDL091C CTK3P46963 296 aaPredicted RBP2.31□□□□□ -2.04
UBX3YDL091C GIM3P53900 129 aa2.31□□□□□ -2.04
UBX3YDL091C RNH201P53942 307 aa2.31□□□□□ -2.04
UBX3YDL091C SPO19Q03029 223 aa2.31□□□□□ -2.04
UBX3YDL091C INP2Q03824 705 aa2.31□□□□□ -2.04
UBX3YDL091C NAT4Q04751 285 aa2.31□□□□□ -2.04
UBX3YDL091C FUS2Q05670 677 aa2.31□□□□□ -2.04
UBX3YDL091C GAT3Q07928 141 aa2.31□□□□□ -2.04
UBX3YDL091C PML1Q07930 204 aaPredicted RBP2.31□□□□□ -2.04
UBX3YDL091C YOR376WQ08900 122 aa2.31□□□□□ -2.04
UBX3YDL091C ATP16Q12165 160 aa2.31□□□□□ -2.04
UBX3YDL091C RFM1Q12192 310 aa2.31□□□□□ -2.04
UBX3YDL091C PSY3Q12318 242 aa2.31□□□□□ -2.04
UBX3YDL091C FAB1P34756 2278 aa2.31□□□□□ -2.04
UBX3YDL091C MMS1Q06211 1407 aa2.31□□□□□ -2.04
UBX3YDL091C RNR2P09938 399 aaKnown RBP2.3□□□□□ -2.04
UBX3YDL091C RBK1P25332 333 aa2.3□□□□□ -2.04
UBX3YDL091C RME1P32338 300 aaKnown RBP2.3□□□□□ -2.04
UBX3YDL091C SSO1P32867 290 aa2.3□□□□□ -2.04
UBX3YDL091C YKL071WP36086 256 aa2.3□□□□□ -2.04
UBX3YDL091C SHE3P38272 425 aaKnown RBP2.3□□□□□ -2.04
UBX3YDL091C TCD1P38756 429 aa2.3□□□□□ -2.04
UBX3YDL091C FHL1P39521 936 aa2.3□□□□□ -2.04
UBX3YDL091C GCD14P46959 383 aaPredicted RBP2.3□□□□□ -2.04
UBX3YDL091C AIM23P47015 356 aa2.3□□□□□ -2.04
UBX3YDL091C SNX4P47057 423 aa2.3□□□□□ -2.04
UBX3YDL091C HCH1P53834 153 aa2.3□□□□□ -2.04
UBX3YDL091C IGO1P53897 168 aa2.3□□□□□ -2.04
UBX3YDL091C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
UBX3YDL091C VPS60Q03390 229 aa2.3□□□□□ -2.04
UBX3YDL091C RRP17Q04031 235 aaPredicted RBP2.3□□□□□ -2.04
UBX3YDL091C VPS20Q04272 221 aa2.3□□□□□ -2.04
UBX3YDL091C SPH1Q06160 661 aa2.3□□□□□ -2.04
UBX3YDL091C SMD2Q06217 110 aaKnown RBP2.3□□□□□ -2.04
UBX3YDL091C DET1Q99288 334 aaKnown RBP2.3□□□□□ -2.04
UBX3YDL091C TSC11P40061 1430 aa2.3□□□□□ -2.04
UBX3YDL091C RAD9P14737 1309 aa2.29□□□□□ -2.04
UBX3YDL091C MYO4P32492 1471 aa2.29□□□□□ -2.04
UBX3YDL091C RPC40P07703 335 aaKnown RBP2.29□□□□□ -2.04
UBX3YDL091C MIR1P23641 311 aaKnown RBP2.29□□□□□ -2.04
UBX3YDL091C MXR2P25566 168 aa2.29□□□□□ -2.04
UBX3YDL091C CIN8P27895 1000 aa2.29□□□□□ -2.04
UBX3YDL091C URA10P30402 227 aa2.29□□□□□ -2.04
UBX3YDL091C NTG1P31378 399 aa2.29□□□□□ -2.04
UBX3YDL091C NUF2P33895 451 aa2.29□□□□□ -2.04
UBX3YDL091C SRB2P34162 210 aa2.29□□□□□ -2.04
UBX3YDL091C SHE1P38200 338 aa2.29□□□□□ -2.04
UBX3YDL091C ECM34P38728 170 aa2.29□□□□□ -2.04
UBX3YDL091C YHR122WP38829 231 aa2.29□□□□□ -2.04
UBX3YDL091C RAD17P48581 401 aa2.29□□□□□ -2.04
UBX3YDL091C COQ5P49017 307 aa2.29□□□□□ -2.04
UBX3YDL091C ARP5P53946 755 aa2.29□□□□□ -2.04
UBX3YDL091C MGR3Q04472 501 aa2.29□□□□□ -2.04
UBX3YDL091C YPR078CQ06813 372 aa2.29□□□□□ -2.04
UBX3YDL091C SRO7Q12038 1033 aa2.29□□□□□ -2.04
UBX3YDL091C SFG1Q12507 346 aa2.29□□□□□ -2.04
UBX3YDL091C LSO2Q3E772 92 aaKnown RBP2.29□□□□□ -2.04
UBX3YDL091C PEP1P32319 1579 aa2.29□□□□□ -2.04
UBX3YDL091C CFT1Q06632 1357 aaKnown RBP2.29□□□□□ -2.04
UBX3YDL091C TUS1Q06412 1307 aa2.28□□□□□ -2.04
UBX3YDL091C ACP1P32463 125 aa2.28□□□□□ -2.04
UBX3YDL091C MKK1P32490 508 aa2.28□□□□□ -2.04
UBX3YDL091C MRPS5P33759 307 aa2.28□□□□□ -2.04
UBX3YDL091C MYO3P36006 1272 aa2.28□□□□□ -2.04
UBX3YDL091C PRY2P36110 329 aa2.28□□□□□ -2.04
UBX3YDL091C IML3P38265 245 aa2.28□□□□□ -2.04
UBX3YDL091C YHB1P39676 399 aaKnown RBP2.28□□□□□ -2.04
UBX3YDL091C FRT2P39734 528 aa2.28□□□□□ -2.04
UBX3YDL091C RTT105P40063 208 aa2.28□□□□□ -2.04
UBX3YDL091C PHB1P40961 287 aa2.28□□□□□ -2.04
UBX3YDL091C MOB2P43563 287 aa2.28□□□□□ -2.04
UBX3YDL091C HIT1P46973 164 aa2.28□□□□□ -2.04
UBX3YDL091C VEL1P53058 206 aa2.28□□□□□ -2.04
UBX3YDL091C YGR015CP53208 328 aa2.28□□□□□ -2.04
UBX3YDL091C RMI1Q02685 241 aa2.28□□□□□ -2.04
UBX3YDL091C RRN5Q02983 363 aa2.28□□□□□ -2.04
UBX3YDL091C BUR2Q05949 395 aa2.28□□□□□ -2.04
UBX3YDL091C BRX1Q08235 291 aaKnown RBP2.28□□□□□ -2.04
UBX3YDL091C YOR012WQ12351 137 aa2.28□□□□□ -2.04
UBX3YDL091C AIM45Q12480 344 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms