RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	MED6	P38782	295 aa		0.82	□□□□□ -2.28
HMRA2	YCR096C	ECM14	P38836	430 aa		0.82	□□□□□ -2.28
HMRA2	YCR096C	SMC2	P38989	1170 aa	Known RBP	0.82	□□□□□ -2.28
HMRA2	YCR096C	DSE1	P40077	573 aa		0.82	□□□□□ -2.28
HMRA2	YCR096C	MLC1	P53141	149 aa		0.82	□□□□□ -2.28
HMRA2	YCR096C	UTP6	Q02354	440 aa	Known RBP	0.82	□□□□□ -2.28
HMRA2	YCR096C	APC4	Q04601	652 aa		0.82	□□□□□ -2.28
HMRA2	YCR096C	DXO1	Q06349	442 aa		0.82	□□□□□ -2.28
HMRA2	YCR096C	VPS63	O13549	108 aa		0.81	□□□□□ -2.28
HMRA2	YCR096C	KRE1	P17260	313 aa		0.81	□□□□□ -2.28
HMRA2	YCR096C	YKL071W	P36086	256 aa		0.81	□□□□□ -2.28
HMRA2	YCR096C	RFT1	P38206	574 aa	Predicted RBP	0.81	□□□□□ -2.28
HMRA2	YCR096C	IML3	P38265	245 aa		0.81	□□□□□ -2.28
HMRA2	YCR096C	LRP1	P38801	184 aa	Known RBP	0.81	□□□□□ -2.28
HMRA2	YCR096C	YNL320W	P42840	284 aa		0.81	□□□□□ -2.28
HMRA2	YCR096C	CAX4	P53223	239 aa		0.81	□□□□□ -2.28
HMRA2	YCR096C	YNR068C	P53754	272 aa		0.81	□□□□□ -2.28
HMRA2	YCR096C	GMC1	Q04399	608 aa		0.81	□□□□□ -2.28
HMRA2	YCR096C	YFH1	Q07540	174 aa		0.81	□□□□□ -2.28
HMRA2	YCR096C	RLP24	Q07915	199 aa	Known RBP	0.81	□□□□□ -2.28
HMRA2	YCR096C	CLP1	Q08685	445 aa	Predicted RBP	0.81	□□□□□ -2.28
HMRA2	YCR096C	RPN8	Q08723	338 aa	Known RBP	0.81	□□□□□ -2.28
HMRA2	YCR096C	YPL264C	Q08980	353 aa		0.81	□□□□□ -2.28
HMRA2	YCR096C	TDH2	P00358	332 aa	Known RBP	0.8	□□□□□ -2.28
HMRA2	YCR096C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.8	□□□□□ -2.28	not detected
HMRA2	YCR096C	MET2	P08465	486 aa		0.8	□□□□□ -2.28
HMRA2	YCR096C	PCH2	P38126	564 aa		0.8	□□□□□ -2.28
HMRA2	YCR096C	RCK1	P38622	512 aa		0.8	□□□□□ -2.28
HMRA2	YCR096C	EFM1	P38732	585 aa		0.8	□□□□□ -2.28
HMRA2	YCR096C	SMF2	P38778	549 aa		0.8	□□□□□ -2.28
HMRA2	YCR096C	GDI1	P39958	451 aa	Known RBP	0.8	□□□□□ -2.28
HMRA2	YCR096C	HIT1	P46973	164 aa		0.8	□□□□□ -2.28
HMRA2	YCR096C	SHE4	P51534	789 aa		0.8	□□□□□ -2.28
HMRA2	YCR096C	YGL088W	P53151	121 aa		0.8	□□□□□ -2.28
HMRA2	YCR096C	RGM1	Q00453	211 aa		0.8	□□□□□ -2.28
HMRA2	YCR096C	YPL113C	Q02961	396 aa		0.8	□□□□□ -2.28
HMRA2	YCR096C	VTI1	Q04338	217 aa		0.8	□□□□□ -2.28
HMRA2	YCR096C	DIB1	Q06819	143 aa	Predicted RBP	0.8	□□□□□ -2.28
HMRA2	YCR096C	APC5	Q08683	685 aa		0.8	□□□□□ -2.28
HMRA2	YCR096C	MHP1	P43638	1398 aa		0.8	□□□□□ -2.28
HMRA2	YCR096C	MAS1	P10507	462 aa		0.79	□□□□□ -2.28
HMRA2	YCR096C	CTA1	P15202	515 aa		0.79	□□□□□ -2.28
HMRA2	YCR096C	ARF2	P19146	181 aa	Known RBP	0.79	□□□□□ -2.28
HMRA2	YCR096C	UBA1	P22515	1024 aa	Known RBP	0.79	□□□□□ -2.28
HMRA2	YCR096C	PHO84	P25297	587 aa	Known RBP	0.79	□□□□□ -2.28
HMRA2	YCR096C	FAA1	P30624	700 aa	Known RBP	0.79	□□□□□ -2.28
HMRA2	YCR096C	YPS1	P32329	569 aa		0.79	□□□□□ -2.28
HMRA2	YCR096C	ARO4	P32449	370 aa	Known RBP	0.79	□□□□□ -2.28
HMRA2	YCR096C	PET8	P38921	284 aa		0.79	□□□□□ -2.28
HMRA2	YCR096C	SCC4	P40090	624 aa		0.79	□□□□□ -2.28
HMRA2	YCR096C	YER188W	P40103	239 aa		0.79	□□□□□ -2.28
HMRA2	YCR096C	SEC28	P40509	296 aa	Known RBP	0.79	□□□□□ -2.28
HMRA2	YCR096C	YHC3	P47040	408 aa		0.79	□□□□□ -2.28
HMRA2	YCR096C	YGL118C	P53132	145 aa		0.79	□□□□□ -2.28
HMRA2	YCR096C	MPS2	P53159	387 aa		0.79	□□□□□ -2.28
HMRA2	YCR096C	ACT1	P60010	375 aa	Known RBP	0.79	□□□□□ -2.28
HMRA2	YCR096C	YPL080C	Q02826	108 aa		0.79	□□□□□ -2.28
HMRA2	YCR096C	ARR1	Q06596	294 aa		0.79	□□□□□ -2.28
HMRA2	YCR096C	SGT2	Q12118	346 aa	Known RBP	0.79	□□□□□ -2.28
HMRA2	YCR096C	STE3	P06783	470 aa		0.78	□□□□□ -2.28
HMRA2	YCR096C	HPR1	P17629	752 aa	Known RBP	0.78	□□□□□ -2.28
HMRA2	YCR096C	SAG1	P20840	650 aa		0.78	□□□□□ -2.28
HMRA2	YCR096C	PRE7	P23724	241 aa	Known RBP	0.78	□□□□□ -2.28
HMRA2	YCR096C	INO2	P26798	304 aa		0.78	□□□□□ -2.28
HMRA2	YCR096C	CIN8	P27895	1000 aa		0.78	□□□□□ -2.28
HMRA2	YCR096C	PEX5	P35056	612 aa		0.78	□□□□□ -2.28
HMRA2	YCR096C	YBL081W	P38180	368 aa	Known RBP	0.78	□□□□□ -2.28
HMRA2	YCR096C	SLM1	P40485	686 aa		0.78	□□□□□ -2.28
HMRA2	YCR096C	YFR045W	P43617	309 aa		0.78	□□□□□ -2.28
HMRA2	YCR096C	PMT4	P46971	762 aa		0.78	□□□□□ -2.28
HMRA2	YCR096C	SDS23	P53172	527 aa		0.78	□□□□□ -2.28
HMRA2	YCR096C	YMR310C	Q04867	317 aa	Predicted RBP	0.78	□□□□□ -2.28
HMRA2	YCR096C	SPH1	Q06160	661 aa		0.78	□□□□□ -2.28
HMRA2	YCR096C	FEX1	Q08913	375 aa		0.78	□□□□□ -2.28
HMRA2	YCR096C	FEX2	Q08991	375 aa		0.78	□□□□□ -2.28
HMRA2	YCR096C	YPR063C	Q12160	140 aa		0.78	□□□□□ -2.28
HMRA2	YCR096C	TFC7	Q12415	435 aa		0.78	□□□□□ -2.28
HMRA2	YCR096C	SPO24	Q3E752	67 aa		0.78	□□□□□ -2.28
HMRA2	YCR096C	TFB5	Q3E7C1	72 aa	Predicted RBP	0.78	□□□□□ -2.28
HMRA2	YCR096C	REP1	P03871	373 aa		0.77	□□□□□ -2.29
HMRA2	YCR096C	THR4	P16120	514 aa	Known RBP	0.77	□□□□□ -2.29
HMRA2	YCR096C	HXT2	P23585	541 aa		0.77	□□□□□ -2.29
HMRA2	YCR096C	ERG9	P29704	444 aa		0.77	□□□□□ -2.29
HMRA2	YCR096C	MYO3	P36006	1272 aa		0.77	□□□□□ -2.29
HMRA2	YCR096C	YBL028C	P38202	106 aa		0.77	□□□□□ -2.29
HMRA2	YCR096C	YBR062C	P38239	180 aa		0.77	□□□□□ -2.29
HMRA2	YCR096C	MMS21	P38632	267 aa		0.77	□□□□□ -2.29
HMRA2	YCR096C	YHR122W	P38829	231 aa		0.77	□□□□□ -2.29
HMRA2	YCR096C	PCL7	P40186	285 aa		0.77	□□□□□ -2.29
HMRA2	YCR096C	YIL089W	P40500	205 aa		0.77	□□□□□ -2.29
HMRA2	YCR096C	ECO1	P43605	281 aa		0.77	□□□□□ -2.29
HMRA2	YCR096C	HSH155	P49955	971 aa	Known RBP	0.77	□□□□□ -2.29
HMRA2	YCR096C	YNL143C	P53908	130 aa		0.77	□□□□□ -2.29
HMRA2	YCR096C	RRB1	Q04225	511 aa	Known RBP	0.77	□□□□□ -2.29
HMRA2	YCR096C	GLE1	Q12315	538 aa		0.77	□□□□□ -2.29
HMRA2	YCR096C	FRE6	Q12473	712 aa		0.77	□□□□□ -2.29
HMRA2	YCR096C	SNF6	P18888	332 aa		0.76	□□□□□ -2.29
HMRA2	YCR096C	YCR025C	P25352	136 aa		0.76	□□□□□ -2.29
HMRA2	YCR096C	YKR032W	P36127	104 aa		0.76	□□□□□ -2.29
HMRA2	YCR096C	RXT2	P38255	430 aa		0.76	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms