RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W CYK3Q07533 885 aa5.13□□□□□ -1.59
SHM1YBR263W DTD1Q07648 150 aaKnown RBP5.13□□□□□ -1.59
SHM1YBR263W FMP40Q08968 688 aaPredicted RBP5.13□□□□□ -1.59
SHM1YBR263W YLR126CQ12288 251 aa5.13□□□□□ -1.59
SHM1YBR263W NPC2Q12408 173 aa5.13□□□□□ -1.59
SHM1YBR263W RPL11BQ3E757 174 aaPredicted RBP5.13□□□□□ -1.59
SHM1YBR263W YOS9Q99220 542 aa5.13□□□□□ -1.59
SHM1YBR263W SIR3P06701 978 aa5.12□□□□□ -1.59
SHM1YBR263W ADE5,7P07244 802 aaKnown RBP5.12□□□□□ -1.59
SHM1YBR263W ATR1P13090 542 aa5.12□□□□□ -1.59
SHM1YBR263W FBA1P14540 359 aaKnown RBP5.12□□□□□ -1.59
SHM1YBR263W PUP2P32379 260 aa5.12□□□□□ -1.59
SHM1YBR263W TIF3P34167 436 aaKnown RBP5.12□□□□□ -1.59
SHM1YBR263W YLF2P38746 405 aa5.12□□□□□ -1.59
SHM1YBR263W YHR097CP38809 366 aaKnown RBP5.12□□□□□ -1.59
SHM1YBR263W NSG1P38837 291 aa5.12□□□□□ -1.59
SHM1YBR263W HRB1P38922 454 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
SHM1YBR263W YEL068CP39977 110 aa5.12□□□□□ -1.59
SHM1YBR263W YNL208WP40159 199 aaKnown RBP5.12□□□□□ -1.59
SHM1YBR263W PRM8P53174 237 aa5.12□□□□□ -1.59
SHM1YBR263W HOT1Q03213 719 aa5.12□□□□□ -1.59
SHM1YBR263W YDR209CQ03480 137 aa5.12□□□□□ -1.59
SHM1YBR263W URC2Q04411 772 aa5.12□□□□□ -1.59
SHM1YBR263W RSA1Q08932 381 aa5.12□□□□□ -1.59
SHM1YBR263W VIK1Q12045 647 aa5.12□□□□□ -1.59
SHM1YBR263W YOR214CQ12282 236 aa5.12□□□□□ -1.59
SHM1YBR263W TAF3Q12297 353 aa5.12□□□□□ -1.59
SHM1YBR263W RPC40P07703 335 aaKnown RBP5.11□□□□□ -1.59
SHM1YBR263W NCP1P16603 691 aaKnown RBP5.11□□□□□ -1.59
SHM1YBR263W FAR1P21268 830 aa5.11□□□□□ -1.59
SHM1YBR263W YPT53P36019 220 aa5.11□□□□□ -1.59
SHM1YBR263W SRO77P38163 1010 aa5.11□□□□□ -1.59
SHM1YBR263W AST2P39945 430 aaKnown RBP5.11□□□□□ -1.59
SHM1YBR263W SPO73P40031 143 aa5.11□□□□□ -1.59
SHM1YBR263W PRE6P40303 254 aaKnown RBP5.11□□□□□ -1.59
SHM1YBR263W FAR7P43592 221 aa5.11□□□□□ -1.59
SHM1YBR263W YFR054CP43622 192 aa5.11□□□□□ -1.59
SHM1YBR263W EMC2P47133 292 aaKnown RBP5.11□□□□□ -1.59
SHM1YBR263W VPS73P53142 486 aaKnown RBP5.11□□□□□ -1.59
SHM1YBR263W SUR7P54003 302 aa5.11□□□□□ -1.59
SHM1YBR263W RSN1Q03516 953 aa5.11□□□□□ -1.59
SHM1YBR263W CGI121Q03705 181 aaKnown RBP5.11□□□□□ -1.59
SHM1YBR263W DCR2Q05924 578 aa5.11□□□□□ -1.59
SHM1YBR263W LOT6Q07923 191 aa5.11□□□□□ -1.59
SHM1YBR263W CRT10Q08226 957 aa5.11□□□□□ -1.59
SHM1YBR263W BRX1Q08235 291 aaKnown RBP5.11□□□□□ -1.59
SHM1YBR263W MDM32Q12171 622 aa5.11□□□□□ -1.59
SHM1YBR263W YOR032W-AQ8TGS1 66 aa5.11□□□□□ -1.59
SHM1YBR263W RHO1P06780 209 aaKnown RBP5.1□□□□□ -1.59
SHM1YBR263W ADH7P25377 361 aa5.1□□□□□ -1.59
SHM1YBR263W RHB1P25378 209 aa5.1□□□□□ -1.59
SHM1YBR263W YCR100CP25606 316 aa5.1□□□□□ -1.59
SHM1YBR263W CWH43P25618 953 aa5.1□□□□□ -1.59
SHM1YBR263W PTP2P29461 750 aa5.1□□□□□ -1.59
SHM1YBR263W ITR2P30606 609 aa5.1□□□□□ -1.59
SHM1YBR263W HBS1P32769 611 aaKnown RBP5.1□□□□□ -1.59
SHM1YBR263W MCM7P38132 845 aa5.1□□□□□ -1.59
SHM1YBR263W RRP4P38792 359 aaKnown RBP5.1□□□□□ -1.59
SHM1YBR263W ALP1P38971 573 aa5.1□□□□□ -1.59
SHM1YBR263W MSS4P38994 779 aa5.1□□□□□ -1.59
SHM1YBR263W THO1P40040 218 aaKnown RBP5.1□□□□□ -1.59
SHM1YBR263W COG3P40094 801 aa5.1□□□□□ -1.59
SHM1YBR263W SEC24P40482 926 aaKnown RBP5.1□□□□□ -1.59
SHM1YBR263W PKP1P40530 394 aa5.1□□□□□ -1.59
SHM1YBR263W PHB1P40961 287 aa5.1□□□□□ -1.59
SHM1YBR263W BNA3P47039 444 aaKnown RBP5.1□□□□□ -1.59
SHM1YBR263W YJR142WP47173 342 aa5.1□□□□□ -1.59
SHM1YBR263W SHE4P51534 789 aa5.1□□□□□ -1.59
SHM1YBR263W LSG1P53145 640 aaKnown RBP5.1□□□□□ -1.59
SHM1YBR263W DAM1P53267 343 aa5.1□□□□□ -1.59
SHM1YBR263W SNZ1Q03148 297 aa5.1□□□□□ -1.59
SHM1YBR263W YMR099CQ03161 297 aaKnown RBP5.1□□□□□ -1.59
SHM1YBR263W RSM28Q03430 361 aa5.1□□□□□ -1.59
SHM1YBR263W ERB1Q04660 807 aaKnown RBP5.1□□□□□ -1.59
SHM1YBR263W YMR226CQ05016 267 aaKnown RBP5.1□□□□□ -1.59
SHM1YBR263W YLR446WQ06204 433 aa5.1□□□□□ -1.59
SHM1YBR263W SKI7Q08491 747 aaPredicted RBP5.1□□□□□ -1.59
SHM1YBR263W TMS1Q12116 473 aa5.1□□□□□ -1.59
SHM1YBR263W DBP10Q12389 995 aaKnown RBP5.1□□□□□ -1.59
SHM1YBR263W RIB3Q99258 208 aa5.1□□□□□ -1.59
SHM1YBR263W CDC9P04819 755 aa5.09□□□□□ -1.59
SHM1YBR263W ERD1P16151 362 aa5.09□□□□□ -1.59
SHM1YBR263W ERD2P18414 219 aa5.09□□□□□ -1.59
SHM1YBR263W RRP7P25368 297 aaPredicted RBP5.09□□□□□ -1.59
SHM1YBR263W DHR2P36009 735 aaPredicted RBP5.09□□□□□ -1.59
SHM1YBR263W MOH1P38191 138 aa5.09□□□□□ -1.59
SHM1YBR263W MGE1P38523 228 aa5.09□□□□□ -1.59
SHM1YBR263W GRE3P38715 327 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
SHM1YBR263W PEX18P38855 283 aa5.09□□□□□ -1.59
SHM1YBR263W YRB2P40517 327 aa5.09□□□□□ -1.59
SHM1YBR263W RPE1P46969 238 aa5.09□□□□□ -1.59
SHM1YBR263W HMS2P47175 358 aa5.09□□□□□ -1.59
SHM1YBR263W PGU1P47180 361 aa5.09□□□□□ -1.59
SHM1YBR263W YGL260WP53056 76 aa5.09□□□□□ -1.59
SHM1YBR263W HOL1P53389 586 aa5.09□□□□□ -1.59
SHM1YBR263W ATG4P53867 494 aa5.09□□□□□ -1.59
SHM1YBR263W RHO5P53879 331 aaKnown RBP5.09□□□□□ -1.59
SHM1YBR263W YKR011CQ02209 353 aa5.09□□□□□ -1.59
SHM1YBR263W PFA5Q03289 374 aa5.09□□□□□ -1.59
SHM1YBR263W EKI1Q03764 534 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms