RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C MRT4P33201 236 aaKnown RBP7.38□□□□□ -1.23
CCL1YPR025C ICP55P40051 511 aa7.37□□□□□ -1.23
CCL1YPR025C PUS1Q12211 544 aaKnown RBP7.37□□□□□ -1.23
CCL1YPR025C SSA2P10592 639 aaKnown RBP7.36□□□□□ -1.23
CCL1YPR025C SCJ1P25303 377 aa7.36□□□□□ -1.23
CCL1YPR025C KTR1P27810 393 aaKnown RBP7.36□□□□□ -1.23
CCL1YPR025C RTT106P40161 455 aa7.36□□□□□ -1.23
CCL1YPR025C HGH1P48362 394 aaKnown RBP7.36□□□□□ -1.23
CCL1YPR025C HPC2Q01448 625 aa7.36□□□□□ -1.23
CCL1YPR025C ALR1Q08269 859 aa7.36□□□□□ -1.23
CCL1YPR025C SLY41P22215 453 aa7.35□□□□□ -1.23
CCL1YPR025C GLN1P32288 370 aaKnown RBP7.35□□□□□ -1.23
CCL1YPR025C MMP1Q12372 583 aa7.35□□□□□ -1.23
CCL1YPR025C LSB3P43603 459 aaKnown RBP7.34□□□□□ -1.23
CCL1YPR025C HST2P53686 357 aa7.34□□□□□ -1.23
CCL1YPR025C TFB3Q03290 321 aa7.34□□□□□ -1.23
CCL1YPR025C RPA14P50106 137 aa7.33□□□□□ -1.24
CCL1YPR025C LSC2P53312 427 aa7.33□□□□□ -1.24
CCL1YPR025C YDL206WQ12424 762 aa7.33□□□□□ -1.24
CCL1YPR025C ESS1P22696 170 aa7.32□□□□□ -1.24
CCL1YPR025C UBP2Q01476 1272 aa7.32□□□□□ -1.24
CCL1YPR025C TBF1Q02457 562 aa7.32□□□□□ -1.24
CCL1YPR025C BRL1P38770 471 aa7.31□□□□□ -1.24
CCL1YPR025C YPR097WQ06839 1073 aa7.3□□□□□ -1.24
CCL1YPR025C ARG82P07250 355 aa7.29□□□□□ -1.24
CCL1YPR025C PKH3Q03306 898 aaPredicted RBP7.29□□□□□ -1.24
CCL1YPR025C PKC1P24583 1151 aa7.28□□□□□ -1.24
CCL1YPR025C AAD14P42884 376 aa7.28□□□□□ -1.24
CCL1YPR025C DPH6Q12429 685 aa7.28□□□□□ -1.24
CCL1YPR025C YJU3P28321 313 aa7.27□□□□□ -1.25
CCL1YPR025C PUS6P53294 404 aa7.27□□□□□ -1.25
CCL1YPR025C ROG3P43602 733 aa7.26□□□□□ -1.25
CCL1YPR025C PHM7Q12252 991 aa7.26□□□□□ -1.25
CCL1YPR025C ARG8P18544 423 aa7.24□□□□□ -1.25
CCL1YPR025C YJR098CP47139 656 aa7.24□□□□□ -1.25
CCL1YPR025C RAD59Q12223 238 aa7.24□□□□□ -1.25
CCL1YPR025C TCB1Q12466 1186 aa7.24□□□□□ -1.25
CCL1YPR025C DLD1P32891 587 aa7.23□□□□□ -1.25
CCL1YPR025C TY1A-MR1Q04215 440 aa7.23□□□□□ -1.25
CCL1YPR025C TRM1P15565 570 aaKnown RBP7.21□□□□□ -1.26
CCL1YPR025C MDJ1P35191 511 aa7.21□□□□□ -1.26
CCL1YPR025C YJL007CP47080 104 aa7.21□□□□□ -1.26
CCL1YPR025C YBL086CP38177 466 aa7.2□□□□□ -1.26
CCL1YPR025C YBL036CP38197 257 aa7.2□□□□□ -1.26
CCL1YPR025C OSH7P38755 437 aa7.19□□□□□ -1.26
CCL1YPR025C RSC30P38781 883 aa7.19□□□□□ -1.26
CCL1YPR025C LYS5P50113 272 aa7.19□□□□□ -1.26
CCL1YPR025C NRD1P53617 575 aaKnown RBP RIP-Chip data7.19□□□□□ -1.26not detected
CCL1YPR025C CCP1P00431 361 aa7.18□□□□□ -1.26
CCL1YPR025C RLF2Q12495 606 aa7.18□□□□□ -1.26
CCL1YPR025C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
CCL1YPR025C BIM1P40013 344 aa7.16□□□□□ -1.26
CCL1YPR025C NSG2P53898 299 aa7.16□□□□□ -1.26
CCL1YPR025C VAC17P25591 423 aa7.15□□□□□ -1.26
CCL1YPR025C CSE4P36012 229 aa7.14□□□□□ -1.27
CCL1YPR025C JJJ3P47138 172 aa7.14□□□□□ -1.27
CCL1YPR025C ATG32P40458 529 aa7.13□□□□□ -1.27
CCL1YPR025C APP1P53933 587 aa7.13□□□□□ -1.27
CCL1YPR025C BIO2P32451 375 aa7.1□□□□□ -1.27
CCL1YPR025C YNL108CP53929 270 aa7.1□□□□□ -1.27
CCL1YPR025C MAK16P10962 306 aaPredicted RBP7.09□□□□□ -1.27
CCL1YPR025C RPL34BP40525 121 aaKnown RBP7.09□□□□□ -1.27
CCL1YPR025C ITT1Q04638 464 aa7.09□□□□□ -1.27
CCL1YPR025C THI72Q08579 599 aa7.08□□□□□ -1.28
CCL1YPR025C TIF1P10081 395 aaKnown RBP7.07□□□□□ -1.28
CCL1YPR025C YDJ1P25491 409 aaKnown RBP7.07□□□□□ -1.28
CCL1YPR025C EMW1P42842 904 aaKnown RBP7.07□□□□□ -1.28
CCL1YPR025C CCT8P47079 568 aaKnown RBP7.06□□□□□ -1.28
CCL1YPR025C AI1P03875 834 aa7.04□□□□□ -1.28
CCL1YPR025C SUP45P12385 437 aaKnown RBP7.04□□□□□ -1.28
CCL1YPR025C SPT5P27692 1063 aaKnown RBP7.04□□□□□ -1.28
CCL1YPR025C RTG2P32608 588 aaKnown RBP7.04□□□□□ -1.28
CCL1YPR025C NAM8Q00539 523 aaKnown RBP7.03□□□□□ -1.28
CCL1YPR025C YFL066CP43538 392 aa7.02□□□□□ -1.29
CCL1YPR025C CDC19P00549 500 aaKnown RBP7.01□□□□□ -1.29
CCL1YPR025C DFG5Q05031 458 aa7.01□□□□□ -1.29
CCL1YPR025C ENO2P00925 437 aaKnown RBP7□□□□□ -1.29
CCL1YPR025C MKS1P34072 584 aa7□□□□□ -1.29
CCL1YPR025C NAF1P53919 492 aaKnown RBP7□□□□□ -1.29
CCL1YPR025C SBP1P10080 294 aaKnown RBP6.98□□□□□ -1.29
CCL1YPR025C YPR053CQ6Q5F3 151 aa6.98□□□□□ -1.29
CCL1YPR025C TEC1P18412 486 aa6.97□□□□□ -1.29
CCL1YPR025C FIG4P42837 879 aa6.97□□□□□ -1.29
CCL1YPR025C CUZ1P53899 274 aa6.97□□□□□ -1.29
CCL1YPR025C ISF1P32488 338 aa6.96□□□□□ -1.3
CCL1YPR025C BDS1Q08347 646 aa6.96□□□□□ -1.3
CCL1YPR025C ENO1P00924 437 aaKnown RBP6.95□□□□□ -1.3
CCL1YPR025C MCM16Q12262 181 aa6.95□□□□□ -1.3
CCL1YPR025C GUT2P32191 649 aa6.94□□□□□ -1.3
CCL1YPR025C CEM1P39525 442 aa6.94□□□□□ -1.3
CCL1YPR025C EMP47P43555 445 aa6.94□□□□□ -1.3
CCL1YPR025C YPP1P46951 817 aa6.94□□□□□ -1.3
CCL1YPR025C RIM21P48565 533 aa6.94□□□□□ -1.3
CCL1YPR025C STE20Q03497 939 aaKnown RBP6.93□□□□□ -1.3
CCL1YPR025C MRX10Q05648 414 aa6.93□□□□□ -1.3
CCL1YPR025C VTC4P47075 721 aa6.92□□□□□ -1.3
CCL1YPR025C YPR084WQ06821 456 aa6.92□□□□□ -1.3
CCL1YPR025C CPS1P27614 576 aa6.91□□□□□ -1.3
CCL1YPR025C TTI1P36097 1038 aa6.91□□□□□ -1.3
CCL1YPR025C FBP26P32604 452 aa6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms