RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	UBX7	P38349	436 aa		6.38	□□□□□ -1.39
CMR3	YPR013C	ERP5	P38819	212 aa		6.37	□□□□□ -1.39
CMR3	YPR013C	TBF1	Q02457	562 aa		6.37	□□□□□ -1.39
CMR3	YPR013C	SAS4	Q04003	481 aa		6.37	□□□□□ -1.39
CMR3	YPR013C	MSC6	Q08818	692 aa	Known RBP	6.37	□□□□□ -1.39
CMR3	YPR013C	ISM1	P48526	1002 aa		6.36	□□□□□ -1.39
CMR3	YPR013C	KAR5	Q04746	504 aa		6.35	□□□□□ -1.39
CMR3	YPR013C	TRK1	P12685	1235 aa		6.34	□□□□□ -1.39
CMR3	YPR013C	KEX2	P13134	814 aa		6.34	□□□□□ -1.39
CMR3	YPR013C	ISF1	P32488	338 aa		6.34	□□□□□ -1.39
CMR3	YPR013C	EMP47	P43555	445 aa		6.34	□□□□□ -1.39
CMR3	YPR013C	IOC4	Q04213	475 aa		6.34	□□□□□ -1.39
CMR3	YPR013C	YEL077C	Q3E7X8	1277 aa		6.34	□□□□□ -1.39
CMR3	YPR013C	PUF6	Q04373	656 aa	Known RBP	6.33	□□□□□ -1.4
CMR3	YPR013C	TY1A-DR4	O74302	440 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-H	P0C2I4	478 aa	Known RBP	6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-A	P0CX57	440 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-PR1	P0CX58	440 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-OR	P0CX59	440 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-PR2	P0CX60	440 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-DR5	P0CX65	440 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-ER2	P0CX66	440 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-GR3	P0CX67	440 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-LR1	P0CX68	440 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-MR2	P0CX69	440 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	ATG3	P40344	310 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-JR2	P47099	440 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	ALD2	P47771	506 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	CWC15	Q03772	175 aa	Known RBP	6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-DR1	Q03856	440 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-ML1	Q04706	440 aa	Known RBP	6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-BR	Q12217	440 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-NL2	Q12470	440 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	TY1A-GR2	Q12485	440 aa		6.32	□□□□□ -1.4
CMR3	YPR013C	PHO87	P25360	923 aa		6.31	□□□□□ -1.4
CMR3	YPR013C	NUD1	P32336	851 aa		6.31	□□□□□ -1.4
CMR3	YPR013C	YHL050C	P38721	697 aa		6.31	□□□□□ -1.4
CMR3	YPR013C	YHR219W	P38900	624 aa		6.31	□□□□□ -1.4
CMR3	YPR013C	ERF2	Q06551	359 aa		6.31	□□□□□ -1.4
CMR3	YPR013C	TRL1	P09880	827 aa	Known RBP	6.3	□□□□□ -1.4
CMR3	YPR013C	HAP4	P14064	554 aa		6.3	□□□□□ -1.4
CMR3	YPR013C	NPL4	P33755	580 aa		6.3	□□□□□ -1.4
CMR3	YPR013C	GRS1	P38088	690 aa	Known RBP	6.3	□□□□□ -1.4
CMR3	YPR013C	TPS3	P38426	1054 aa	Known RBP	6.3	□□□□□ -1.4
CMR3	YPR013C	POL32	P47110	350 aa		6.3	□□□□□ -1.4
CMR3	YPR013C	STE20	Q03497	939 aa	Known RBP	6.3	□□□□□ -1.4
CMR3	YPR013C	YTA7	P40340	1379 aa		6.3	□□□□□ -1.4
CMR3	YPR013C	PRT1	P06103	763 aa	Known RBP	6.29	□□□□□ -1.4
CMR3	YPR013C	SEC2	P17065	759 aa		6.29	□□□□□ -1.4
CMR3	YPR013C	GUT2	P32191	649 aa		6.29	□□□□□ -1.4
CMR3	YPR013C	PPX1	P38698	397 aa		6.29	□□□□□ -1.4
CMR3	YPR013C	MDJ2	P42834	146 aa		6.29	□□□□□ -1.4
CMR3	YPR013C	SVF1	Q05515	481 aa		6.29	□□□□□ -1.4
CMR3	YPR013C	RRP15	Q06511	250 aa	Predicted RBP	6.29	□□□□□ -1.4
CMR3	YPR013C	FRA1	Q07825	749 aa		6.29	□□□□□ -1.4
CMR3	YPR013C	YDL206W	Q12424	762 aa		6.29	□□□□□ -1.4
CMR3	YPR013C	TEC1	P18412	486 aa		6.28	□□□□□ -1.4
CMR3	YPR013C	CST6	P40535	587 aa		6.28	□□□□□ -1.4
CMR3	YPR013C	CLA4	P48562	842 aa		6.28	□□□□□ -1.4
CMR3	YPR013C	RPA14	P50106	137 aa		6.27	□□□□□ -1.41
CMR3	YPR013C	ATG1	P53104	897 aa		6.27	□□□□□ -1.41
CMR3	YPR013C	PNP1	Q05788	311 aa		6.27	□□□□□ -1.41
CMR3	YPR013C	ATE1	P16639	503 aa		6.26	□□□□□ -1.41
CMR3	YPR013C	THI12	P42883	340 aa		6.26	□□□□□ -1.41
CMR3	YPR013C	THI5	P43534	340 aa		6.26	□□□□□ -1.41
CMR3	YPR013C	THI11	P47183	340 aa		6.26	□□□□□ -1.41
CMR3	YPR013C	ACS2	P52910	683 aa	Known RBP	6.26	□□□□□ -1.41
CMR3	YPR013C	UTP13	Q05946	817 aa	Known RBP	6.26	□□□□□ -1.41
CMR3	YPR013C	THI13	Q07748	340 aa		6.26	□□□□□ -1.41
CMR3	YPR013C	SRS2	P12954	1174 aa		6.25	□□□□□ -1.41
CMR3	YPR013C	SOH1	P38633	127 aa		6.25	□□□□□ -1.41
CMR3	YPR013C	OCA5	P38738	679 aa		6.25	□□□□□ -1.41
CMR3	YPR013C	AIR1	P40507	360 aa	Known RBP	6.25	□□□□□ -1.41
CMR3	YPR013C	FIG4	P42837	879 aa		6.25	□□□□□ -1.41
CMR3	YPR013C	ROM1	P53046	1155 aa		6.25	□□□□□ -1.41
CMR3	YPR013C	PUN1	Q06991	263 aa		6.25	□□□□□ -1.41
CMR3	YPR013C	FUR4	P05316	633 aa	Known RBP	6.24	□□□□□ -1.41
CMR3	YPR013C	TUB4	P53378	473 aa		6.24	□□□□□ -1.41
CMR3	YPR013C	YPR097W	Q06839	1073 aa		6.24	□□□□□ -1.41
CMR3	YPR013C	ALR1	Q08269	859 aa		6.24	□□□□□ -1.41
CMR3	YPR013C	GAS4	Q08271	471 aa		6.24	□□□□□ -1.41
CMR3	YPR013C	WHI5	Q12416	295 aa		6.24	□□□□□ -1.41
CMR3	YPR013C	BOL3	P39724	118 aa		6.23	□□□□□ -1.41
CMR3	YPR013C	APL6	P46682	809 aa		6.23	□□□□□ -1.41
CMR3	YPR013C	AGE1	Q04412	482 aa		6.23	□□□□□ -1.41
CMR3	YPR013C	YPR084W	Q06821	456 aa		6.23	□□□□□ -1.41
CMR3	YPR013C	TSC13	Q99190	310 aa		6.23	□□□□□ -1.41
CMR3	YPR013C	GCD11	P32481	527 aa	Known RBP	6.22	□□□□□ -1.41
CMR3	YPR013C	MGE1	P38523	228 aa		6.22	□□□□□ -1.41
CMR3	YPR013C	GLO3	P38682	493 aa	Known RBP	6.22	□□□□□ -1.41
CMR3	YPR013C	ACF4	P47129	309 aa		6.22	□□□□□ -1.41
CMR3	YPR013C	NNF1	P47149	201 aa		6.22	□□□□□ -1.41
CMR3	YPR013C	OYE2	Q03558	400 aa	Known RBP	6.22	□□□□□ -1.41
CMR3	YPR013C	VAN1	P23642	535 aa		6.21	□□□□□ -1.42
CMR3	YPR013C	MRF1	P30775	413 aa	Predicted RBP	6.21	□□□□□ -1.42
CMR3	YPR013C	SEC8	P32855	1065 aa		6.21	□□□□□ -1.42
CMR3	YPR013C	PDI1	P17967	522 aa	Known RBP	6.2	□□□□□ -1.42
CMR3	YPR013C	QDR1	P40475	563 aa		6.2	□□□□□ -1.42
CMR3	YPR013C	NUT2	Q06213	157 aa		6.2	□□□□□ -1.42
CMR3	YPR013C	TRS33	Q99394	268 aa		6.2	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms